RNA–Protein interactions for RNA: ENST00000416500.5

LCP1-203, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-203ENST00000416500 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
LCP1-203ENST00000416500 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.063e-8■■■■□ 22.3
LCP1-203ENST00000416500 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
LCP1-203ENST00000416500 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
LCP1-203ENST00000416500 WDR97A6NE52 1622 aa15.37■□□□□ 0.05
LCP1-203ENST00000416500 ABCA10Q8WWZ4 1543 aa15.35■□□□□ 0.05
LCP1-203ENST00000416500 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
LCP1-203ENST00000416500 TRHP20396 242 aaPredicted RBP15.31■□□□□ 0.04
LCP1-203ENST00000416500 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
LCP1-203ENST00000416500 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
LCP1-203ENST00000416500 GAPVD1Q14C86 1478 aa15.28■□□□□ 0.04
LCP1-203ENST00000416500 GRIN2BQ13224 1484 aa15.25■□□□□ 0.03
LCP1-203ENST00000416500 PBRM1Q86U86 1689 aa15.25■□□□□ 0.03
LCP1-203ENST00000416500 SNAPC4Q5SXM2 1469 aa15.23■□□□□ 0.03
LCP1-203ENST00000416500 TRIM41Q8WV44 630 aa15.23■□□□□ 0.03
LCP1-203ENST00000416500 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
LCP1-203ENST00000416500 CHD1O14646 1710 aa15.2■□□□□ 0.02
LCP1-203ENST00000416500 ATXN8OSP0DMR3 200 aa15.19■□□□□ 0.02
LCP1-203ENST00000416500 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
LCP1-203ENST00000416500 FBLN2P98095 1184 aa15.18■□□□□ 0.02
LCP1-203ENST00000416500 DSG3P32926 999 aa15.17■□□□□ 0.02
LCP1-203ENST00000416500 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
LCP1-203ENST00000416500 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
LCP1-203ENST00000416500 ERICH3Q5RHP9 1530 aa15.15■□□□□ 0.02
LCP1-203ENST00000416500 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
LCP1-203ENST00000416500 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
LCP1-203ENST00000416500 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
LCP1-203ENST00000416500 IGF1RP08069 1367 aa15.13■□□□□ 0.01
LCP1-203ENST00000416500 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
LCP1-203ENST00000416500 ADAMTS12P58397 1594 aa15.12■□□□□ 0.01
LCP1-203ENST00000416500 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
LCP1-203ENST00000416500 ABCB7O75027 752 aa15.09■□□□□ 0.01
LCP1-203ENST00000416500 GRIN2AQ12879 1464 aa15.07■□□□□ 0
LCP1-203ENST00000416500 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
LCP1-203ENST00000416500 CUL7Q14999 1698 aa15.03■□□□□ -0
LCP1-203ENST00000416500 CLASP1Q7Z460 1538 aa15.02□□□□□ -0.01
LCP1-203ENST00000416500 CEP170Q5SW79 1584 aa15.01□□□□□ -0.01
LCP1-203ENST00000416500 POLA2Q14181 598 aa15□□□□□ -0.01
LCP1-203ENST00000416500 NUP160Q12769 1436 aa15□□□□□ -0.01
LCP1-203ENST00000416500 FAM9AQ8IZU1 332 aaPredicted RBP14.96□□□□□ -0.01
LCP1-203ENST00000416500 RIMBP3CA6NJZ7 1639 aa14.93□□□□□ -0.02
LCP1-203ENST00000416500 RIMBP3BA6NNM3 1639 aa14.93□□□□□ -0.02
LCP1-203ENST00000416500 RIMBP3Q9UFD9 1639 aa14.93□□□□□ -0.02
LCP1-203ENST00000416500 RAPGEF2Q9Y4G8 1499 aa14.93□□□□□ -0.02
LCP1-203ENST00000416500 ARHGEF11O15085 1522 aa14.92□□□□□ -0.02
LCP1-203ENST00000416500 PRXQ9BXM0 1461 aa14.92□□□□□ -0.02
LCP1-203ENST00000416500 EEA1Q15075 1411 aa14.92□□□□□ -0.02
LCP1-203ENST00000416500 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
LCP1-203ENST00000416500 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
LCP1-203ENST00000416500 ERCC6L2Q5T890 1561 aa14.87□□□□□ -0.03
LCP1-203ENST00000416500 JPH4Q96JJ6 628 aa14.87□□□□□ -0.03
LCP1-203ENST00000416500 ARAP1Q96P48 1450 aa14.83□□□□□ -0.03
LCP1-203ENST00000416500 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
LCP1-203ENST00000416500 CYB5RLQ6IPT4 315 aa14.81□□□□□ -0.04
LCP1-203ENST00000416500 IQGAP2Q13576 1575 aa14.8□□□□□ -0.04
LCP1-203ENST00000416500 CTTNBP2Q8WZ74 1663 aa14.78□□□□□ -0.04
LCP1-203ENST00000416500 KIF21BO75037 1637 aa14.78□□□□□ -0.04
LCP1-203ENST00000416500 ZBTB12Q9Y330 459 aaPredicted RBP14.78□□□□□ -0.04
LCP1-203ENST00000416500 UGGT2Q9NYU1 1516 aa14.73□□□□□ -0.05
LCP1-203ENST00000416500 DISP1Q96F81 1524 aa14.72□□□□□ -0.05
LCP1-203ENST00000416500 GOLGA3Q08378 1498 aa14.69□□□□□ -0.06
LCP1-203ENST00000416500 CARMIL2Q6F5E8 1435 aa14.68□□□□□ -0.06
LCP1-203ENST00000416500 UBTFP17480 764 aaKnown RBP14.68□□□□□ -0.06
LCP1-203ENST00000416500 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
LCP1-203ENST00000416500 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
LCP1-203ENST00000416500 RANGAP1P46060 587 aaPredicted RBP14.66□□□□□ -0.06
LCP1-203ENST00000416500 TNIKQ9UKE5 1360 aa14.65□□□□□ -0.06
LCP1-203ENST00000416500 PTPRGP23470 1445 aa14.65□□□□□ -0.06
LCP1-203ENST00000416500 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
LCP1-203ENST00000416500 SAMD9Q5K651 1589 aa14.6□□□□□ -0.07
LCP1-203ENST00000416500 ADCY10Q96PN6 1610 aa14.59□□□□□ -0.07
LCP1-203ENST00000416500 LOC105371045A0A1W2PR82 267 aa14.58□□□□□ -0.08
LCP1-203ENST00000416500 RBM42Q9BTD8 480 aaKnown RBP14.55□□□□□ -0.08
LCP1-203ENST00000416500 FHOD3Q2V2M9 1422 aa14.55□□□□□ -0.08
LCP1-203ENST00000416500 UACAQ9BZF9 1416 aa14.54□□□□□ -0.08
LCP1-203ENST00000416500 PLB1Q6P1J6 1458 aa14.54□□□□□ -0.08
LCP1-203ENST00000416500 ARHGAP35Q9NRY4 1499 aa14.53□□□□□ -0.08
LCP1-203ENST00000416500 EFCAB5A4FU69 1503 aa14.52□□□□□ -0.08
LCP1-203ENST00000416500 ABCA8O94911 1581 aa14.51□□□□□ -0.09
LCP1-203ENST00000416500 ABCC2Q92887 1545 aa14.51□□□□□ -0.09
LCP1-203ENST00000416500 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
LCP1-203ENST00000416500 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
LCP1-203ENST00000416500 MKRN4PQ13434 485 aaPredicted RBP14.46□□□□□ -0.09
LCP1-203ENST00000416500 CLIP1P30622 1438 aa14.46□□□□□ -0.09
LCP1-203ENST00000416500 KDM5BQ9UGL1 1544 aa14.46□□□□□ -0.1
LCP1-203ENST00000416500 RAPGEF6Q8TEU7 1601 aa14.44□□□□□ -0.1
LCP1-203ENST00000416500 ARID3CA6NKF2 412 aa14.44□□□□□ -0.1
LCP1-203ENST00000416500 ZCCHC11Q5TAX3 1644 aaKnown RBP14.44□□□□□ -0.1
LCP1-203ENST00000416500 MAPKBP1O60336 1514 aa14.43□□□□□ -0.1
LCP1-203ENST00000416500 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
LCP1-203ENST00000416500 ATP10BO94823 1461 aa14.41□□□□□ -0.1
LCP1-203ENST00000416500 NUP153P49790 1475 aaKnown RBP14.41□□□□□ -0.1
LCP1-203ENST00000416500 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
LCP1-203ENST00000416500 KIF13AQ9H1H9 1805 aa14.4□□□□□ -0.1
LCP1-203ENST00000416500 FMN1Q68DA7 1419 aa14.39□□□□□ -0.11
LCP1-203ENST00000416500 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
LCP1-203ENST00000416500 DIP2BQ9P265 1576 aa14.36□□□□□ -0.11
LCP1-203ENST00000416500 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
LCP1-203ENST00000416500 ATP1B4Q9UN42 357 aaPredicted RBP14.36□□□□□ -0.11
LCP1-203ENST00000416500 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms