RNA–Protein interactions for RNA: ENST00000415938.7

PKD1-202, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 3,386 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-202ENST00000415938 NESP48681 1621 aa19.06■□□□□ 0.64
PKD1-202ENST00000415938 ANP32CO43423 234 aa19.05■□□□□ 0.64
PKD1-202ENST00000415938 RBM19Q9Y4C8 960 aaKnown RBP19.05■□□□□ 0.64
PKD1-202ENST00000415938 CFTRP13569 1480 aa19.04■□□□□ 0.64
PKD1-202ENST00000415938 ARAP1Q96P48 1450 aa19.04■□□□□ 0.64
PKD1-202ENST00000415938 CUX2O14529 1486 aa19.03■□□□□ 0.64
PKD1-202ENST00000415938 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.63
PKD1-202ENST00000415938 CADPSQ9ULU8 1353 aa19■□□□□ 0.63
PKD1-202ENST00000415938 PRXQ9BXM0 1461 aa19■□□□□ 0.63
PKD1-202ENST00000415938 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
PKD1-202ENST00000415938 RRBP1Q9P2E9 1410 aaKnown RBP18.94■□□□□ 0.62
PKD1-202ENST00000415938 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
PKD1-202ENST00000415938 ERICH3Q5RHP9 1530 aa18.92■□□□□ 0.62
PKD1-202ENST00000415938 FBLN2P98095 1184 aa18.91■□□□□ 0.62
PKD1-202ENST00000415938 CC2D2AQ9P2K1 1620 aa18.91■□□□□ 0.62
PKD1-202ENST00000415938 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
PKD1-202ENST00000415938 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
PKD1-202ENST00000415938 CNGB1Q14028 1251 aaPredicted RBP18.9■□□□□ 0.62
PKD1-202ENST00000415938 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
PKD1-202ENST00000415938 IGF1RP08069 1367 aa18.88■□□□□ 0.61
PKD1-202ENST00000415938 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
PKD1-202ENST00000415938 SETD5Q9C0A6 1442 aa18.88■□□□□ 0.61
PKD1-202ENST00000415938 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
PKD1-202ENST00000415938 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
PKD1-202ENST00000415938 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
PKD1-202ENST00000415938 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
PKD1-202ENST00000415938 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.6
PKD1-202ENST00000415938 MAPKBP1O60336 1514 aa18.82■□□□□ 0.6
PKD1-202ENST00000415938 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
PKD1-202ENST00000415938 PHLDB1Q86UU1 1377 aa18.8■□□□□ 0.6
PKD1-202ENST00000415938 MSH5O43196 834 aa18.77■□□□□ 0.6
PKD1-202ENST00000415938 CCER2I3L3R5 266 aa18.75■□□□□ 0.59
PKD1-202ENST00000415938 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
PKD1-202ENST00000415938 FAM9BQ8IZU0 186 aa18.72■□□□□ 0.59
PKD1-202ENST00000415938 POLR3GLQ9BT43 218 aa18.67■□□□□ 0.58
PKD1-202ENST00000415938 CHIC2Q9UKJ5 165 aa18.67■□□□□ 0.58
PKD1-202ENST00000415938 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
PKD1-202ENST00000415938 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
PKD1-202ENST00000415938 LRRC9Q6ZRR7 1453 aa18.65■□□□□ 0.58
PKD1-202ENST00000415938 NBR1Q14596 966 aa18.64■□□□□ 0.57
PKD1-202ENST00000415938 FHAD1B1AJZ9 1412 aa18.63■□□□□ 0.57
PKD1-202ENST00000415938 TIAM1Q13009 1591 aa18.62■□□□□ 0.57
PKD1-202ENST00000415938 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
PKD1-202ENST00000415938 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
PKD1-202ENST00000415938 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
PKD1-202ENST00000415938 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
PKD1-202ENST00000415938 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
PKD1-202ENST00000415938 MRS2Q9HD23 443 aa18.57■□□□□ 0.56
PKD1-202ENST00000415938 HSPA5P11021 654 aaKnown RBP18.56■□□□□ 0.56
PKD1-202ENST00000415938 PRDM2Q13029 1718 aa18.56■□□□□ 0.56
PKD1-202ENST00000415938 MTUS2Q5JR59 1369 aa18.56■□□□□ 0.56
PKD1-202ENST00000415938 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
PKD1-202ENST00000415938 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.567e-7■■■■■ 49.8
PKD1-202ENST00000415938 FOXD1Q16676 465 aa18.53■□□□□ 0.56
PKD1-202ENST00000415938 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
PKD1-202ENST00000415938 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
PKD1-202ENST00000415938 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
PKD1-202ENST00000415938 FANCIQ9NVI1 1328 aa18.5■□□□□ 0.55
PKD1-202ENST00000415938 CCDC18Q5T9S5 1454 aa18.5■□□□□ 0.55
PKD1-202ENST00000415938 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
PKD1-202ENST00000415938 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
PKD1-202ENST00000415938 DEKP35659 375 aaKnown RBP18.48■□□□□ 0.55
PKD1-202ENST00000415938 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
PKD1-202ENST00000415938 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
PKD1-202ENST00000415938 PCF11O94913 1555 aaKnown RBP18.46■□□□□ 0.55
PKD1-202ENST00000415938 URB2Q14146 1524 aaKnown RBP18.44■□□□□ 0.54
PKD1-202ENST00000415938 GAPVD1Q14C86 1478 aa18.43■□□□□ 0.54
PKD1-202ENST00000415938 FMN1Q68DA7 1419 aa18.43■□□□□ 0.54
PKD1-202ENST00000415938 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
PKD1-202ENST00000415938 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
PKD1-202ENST00000415938 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
PKD1-202ENST00000415938 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.53
PKD1-202ENST00000415938 CCDC136Q96JN2 1154 aa18.38■□□□□ 0.53
PKD1-202ENST00000415938 NOP58Q9Y2X3 529 aaKnown RBP18.38■□□□□ 0.53
PKD1-202ENST00000415938 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
PKD1-202ENST00000415938 PTPRKQ15262 1439 aa18.37■□□□□ 0.53
PKD1-202ENST00000415938 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
PKD1-202ENST00000415938 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
PKD1-202ENST00000415938 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
PKD1-202ENST00000415938 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
PKD1-202ENST00000415938 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
PKD1-202ENST00000415938 UACAQ9BZF9 1416 aa18.37■□□□□ 0.53
PKD1-202ENST00000415938 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
PKD1-202ENST00000415938 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
PKD1-202ENST00000415938 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
PKD1-202ENST00000415938 SALL2Q9Y467 1007 aaPredicted RBP18.34■□□□□ 0.53
PKD1-202ENST00000415938 EFCAB5A4FU69 1503 aa18.34■□□□□ 0.53
PKD1-202ENST00000415938 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.52
PKD1-202ENST00000415938 CUL7Q14999 1698 aa18.32■□□□□ 0.52
PKD1-202ENST00000415938 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
PKD1-202ENST00000415938 HFM1A2PYH4 1435 aa18.29■□□□□ 0.52
PKD1-202ENST00000415938 NAIPQ13075 1403 aa18.29■□□□□ 0.52
PKD1-202ENST00000415938 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
PKD1-202ENST00000415938 AKNAQ7Z591 1439 aa18.27■□□□□ 0.52
PKD1-202ENST00000415938 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.51
PKD1-202ENST00000415938 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
PKD1-202ENST00000415938 ZBTB47Q9UFB7 747 aaPredicted RBP18.26■□□□□ 0.51
PKD1-202ENST00000415938 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
PKD1-202ENST00000415938 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
PKD1-202ENST00000415938 RTN4Q9NQC3 1192 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms