RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 POTEHQ6S545 545 aa17.43■□□□□ 0.38
HCG27-202ENST00000414008 PRKAR2AP13861 404 aaKnown RBP17.42■□□□□ 0.38
HCG27-202ENST00000414008 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
HCG27-202ENST00000414008 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
HCG27-202ENST00000414008 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
HCG27-202ENST00000414008 MIER1Q8N108 512 aa17.32■□□□□ 0.36
HCG27-202ENST00000414008 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
HCG27-202ENST00000414008 PLCD3Q8N3E9 789 aa17.29■□□□□ 0.36
HCG27-202ENST00000414008 NESP48681 1621 aa17.26■□□□□ 0.35
HCG27-202ENST00000414008 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
HCG27-202ENST00000414008 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
HCG27-202ENST00000414008 VASPP50552 380 aaPredicted RBP17.23■□□□□ 0.35
HCG27-202ENST00000414008 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
HCG27-202ENST00000414008 FARP1Q9Y4F1 1045 aaPredicted RBP17.2■□□□□ 0.34
HCG27-202ENST00000414008 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
HCG27-202ENST00000414008 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
HCG27-202ENST00000414008 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
HCG27-202ENST00000414008 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
HCG27-202ENST00000414008 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
HCG27-202ENST00000414008 CFTRP13569 1480 aa17.12■□□□□ 0.33
HCG27-202ENST00000414008 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
HCG27-202ENST00000414008 HAX1O00165 279 aa17.06■□□□□ 0.32
HCG27-202ENST00000414008 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
HCG27-202ENST00000414008 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
HCG27-202ENST00000414008 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
HCG27-202ENST00000414008 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
HCG27-202ENST00000414008 IFNLR1Q8IU57 520 aaPredicted RBP16.96■□□□□ 0.31
HCG27-202ENST00000414008 CUX2O14529 1486 aa16.96■□□□□ 0.31
HCG27-202ENST00000414008 C19orf67A6NJJ6 358 aa16.94■□□□□ 0.3
HCG27-202ENST00000414008 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
HCG27-202ENST00000414008 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
HCG27-202ENST00000414008 CD44P16070 742 aaKnown RBP16.92■□□□□ 0.3
HCG27-202ENST00000414008 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
HCG27-202ENST00000414008 PRDM2Q13029 1718 aa16.88■□□□□ 0.29
HCG27-202ENST00000414008 WDR62O43379 1518 aa16.85■□□□□ 0.29
HCG27-202ENST00000414008 SPOCK2Q92563 424 aa16.84■□□□□ 0.29
HCG27-202ENST00000414008 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
HCG27-202ENST00000414008 NUBP1P53384 320 aa16.82■□□□□ 0.28
HCG27-202ENST00000414008 ZRANB1Q9UGI0 708 aa16.8■□□□□ 0.28
HCG27-202ENST00000414008 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
HCG27-202ENST00000414008 TSPYL2Q9H2G4 693 aaPredicted RBP16.79■□□□□ 0.28
HCG27-202ENST00000414008 EVX2Q03828 476 aa16.78■□□□□ 0.28
HCG27-202ENST00000414008 FAM212AQ96EL1 285 aa16.77■□□□□ 0.28
HCG27-202ENST00000414008 ABCC8Q09428 1581 aa16.76■□□□□ 0.27
HCG27-202ENST00000414008 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
HCG27-202ENST00000414008 DCAF8Q5TAQ9 597 aa16.71■□□□□ 0.27
HCG27-202ENST00000414008 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
HCG27-202ENST00000414008 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
HCG27-202ENST00000414008 GSE1Q14687 1217 aa16.68■□□□□ 0.26
HCG27-202ENST00000414008 ZNF579Q8NAF0 562 aaKnown RBP16.68■□□□□ 0.26
HCG27-202ENST00000414008 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
HCG27-202ENST00000414008 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
HCG27-202ENST00000414008 CLCN6P51797 869 aa16.63■□□□□ 0.25
HCG27-202ENST00000414008 CUX1P39880 1505 aa16.63■□□□□ 0.25
HCG27-202ENST00000414008 CIZ1Q9ULV3 898 aaPredicted RBP16.62■□□□□ 0.25
HCG27-202ENST00000414008 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
HCG27-202ENST00000414008 PHF12Q96QT6 1004 aa16.58■□□□□ 0.24
HCG27-202ENST00000414008 SOGA1O94964 1423 aa16.58■□□□□ 0.24
HCG27-202ENST00000414008 WRNQ14191 1432 aaPredicted RBP eCLIP16.58■□□□□ 0.24
HCG27-202ENST00000414008 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
HCG27-202ENST00000414008 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
HCG27-202ENST00000414008 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
HCG27-202ENST00000414008 GABBR2O75899 941 aa16.52■□□□□ 0.24
HCG27-202ENST00000414008 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
HCG27-202ENST00000414008 KIF12Q96FN5 646 aa16.49■□□□□ 0.23
HCG27-202ENST00000414008 TOP2BQ02880 1626 aa16.48■□□□□ 0.23
HCG27-202ENST00000414008 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
HCG27-202ENST00000414008 PYGBP11216 843 aa16.48■□□□□ 0.23
HCG27-202ENST00000414008 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
HCG27-202ENST00000414008 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.234e-9■■■■□ 24.7
HCG27-202ENST00000414008 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
HCG27-202ENST00000414008 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
HCG27-202ENST00000414008 MAP3K13O43283 966 aa16.44■□□□□ 0.22
HCG27-202ENST00000414008 SGIP1Q9BQI5 828 aa16.43■□□□□ 0.22
HCG27-202ENST00000414008 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
HCG27-202ENST00000414008 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
HCG27-202ENST00000414008 CHRM1P11229 460 aaPredicted RBP16.42■□□□□ 0.22
HCG27-202ENST00000414008 DNAJC5Q9H3Z4 198 aa16.41■□□□□ 0.22
HCG27-202ENST00000414008 PCDHB13Q9Y5F0 798 aa16.41■□□□□ 0.22
HCG27-202ENST00000414008 GALR2O43603 387 aaPredicted RBP16.4■□□□□ 0.22
HCG27-202ENST00000414008 MS4A3Q96HJ5 214 aa16.39■□□□□ 0.21
HCG27-202ENST00000414008 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
HCG27-202ENST00000414008 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
HCG27-202ENST00000414008 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
HCG27-202ENST00000414008 PKD2Q13563 968 aa16.31■□□□□ 0.2
HCG27-202ENST00000414008 ZNF467Q7Z7K2 595 aaPredicted RBP16.31■□□□□ 0.2
HCG27-202ENST00000414008 DCBLD2Q96PD2 775 aa16.31■□□□□ 0.2
HCG27-202ENST00000414008 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
HCG27-202ENST00000414008 SNAPC4Q5SXM2 1469 aa16.3■□□□□ 0.2
HCG27-202ENST00000414008 ECM2O94769 699 aaPredicted RBP16.3■□□□□ 0.2
HCG27-202ENST00000414008 IFNL1Q8IU54 200 aa16.3■□□□□ 0.2
HCG27-202ENST00000414008 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
HCG27-202ENST00000414008 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
HCG27-202ENST00000414008 PCDHB8Q9UN66 801 aa16.25■□□□□ 0.19
HCG27-202ENST00000414008 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
HCG27-202ENST00000414008 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
HCG27-202ENST00000414008 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
HCG27-202ENST00000414008 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
HCG27-202ENST00000414008 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
HCG27-202ENST00000414008 TIE1P35590 1138 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms