RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 AEBP2Q6ZN18 517 aaPredicted RBP32.63■■■□□ 2.81
HCG27-202ENST00000414008 CHIC1Q5VXU3 224 aa31.79■■■□□ 2.68
HCG27-202ENST00000414008 PHF23Q9BUL5 403 aaPredicted RBP27.87■■■□□ 2.05
HCG27-202ENST00000414008 SENP3Q9H4L4 574 aaPredicted RBP27.84■■■□□ 2.05
HCG27-202ENST00000414008 PLPPR3Q6T4P5 718 aa25.8■■□□□ 1.72
HCG27-202ENST00000414008 FOXD1Q16676 465 aa25.78■■□□□ 1.72
HCG27-202ENST00000414008 PPP6R1Q9UPN7 881 aa24.65■■□□□ 1.54
HCG27-202ENST00000414008 ADRA2BP18089 450 aa24.64■■□□□ 1.54
HCG27-202ENST00000414008 PIAS4Q8N2W9 510 aaPredicted RBP24.33■■□□□ 1.49
HCG27-202ENST00000414008 MSH5O43196 834 aa23.94■■□□□ 1.42
HCG27-202ENST00000414008 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
HCG27-202ENST00000414008 SCAF1Q9H7N4 1312 aaKnown RBP22.69■■□□□ 1.22
HCG27-202ENST00000414008 PPP4R3CPQ6ZMV5 832 aa22.67■■□□□ 1.22
HCG27-202ENST00000414008 MAPK8IP2Q13387 824 aaPredicted RBP22.39■■□□□ 1.17
HCG27-202ENST00000414008 DMRT2Q9Y5R5 561 aa22.16■■□□□ 1.14
HCG27-202ENST00000414008 NCBP3Q53F19 620 aaKnown RBP22.11■■□□□ 1.13
HCG27-202ENST00000414008 CNKSR2Q8WXI2 1034 aa22.1■■□□□ 1.13
HCG27-202ENST00000414008 POTEDQ86YR6 584 aa22■■□□□ 1.11
HCG27-202ENST00000414008 KCNA4P22459 653 aa21.93■■□□□ 1.1
HCG27-202ENST00000414008 RNF216Q9NWF9 866 aaPredicted RBP21.7■■□□□ 1.06
HCG27-202ENST00000414008 NPM3O75607 178 aaKnown RBP21.69■■□□□ 1.06
HCG27-202ENST00000414008 HOXD11P31277 338 aaPredicted RBP21.63■■□□□ 1.05
HCG27-202ENST00000414008 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
HCG27-202ENST00000414008 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
HCG27-202ENST00000414008 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
HCG27-202ENST00000414008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.67■□□□□ 0.9
HCG27-202ENST00000414008 SLC4A2P04920 1241 aa20.48■□□□□ 0.87
HCG27-202ENST00000414008 RNF39Q9H2S5 420 aa20.43■□□□□ 0.86
HCG27-202ENST00000414008 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
HCG27-202ENST00000414008 FOXD4L1Q9NU39 408 aa20.28■□□□□ 0.84
HCG27-202ENST00000414008 C1QBPQ07021 282 aaKnown RBP20.24■□□□□ 0.83
HCG27-202ENST00000414008 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
HCG27-202ENST00000414008 ZBTB22O15209 634 aa20.11■□□□□ 0.81
HCG27-202ENST00000414008 MYCNP04198 464 aaPredicted RBP20.1■□□□□ 0.81
HCG27-202ENST00000414008 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
HCG27-202ENST00000414008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
HCG27-202ENST00000414008 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
HCG27-202ENST00000414008 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
HCG27-202ENST00000414008 SAMD1Q6SPF0 538 aaPredicted RBP19.95■□□□□ 0.78
HCG27-202ENST00000414008 ABCC9O60706 1549 aa19.94■□□□□ 0.78
HCG27-202ENST00000414008 APLP2Q06481 763 aa19.92■□□□□ 0.78
HCG27-202ENST00000414008 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
HCG27-202ENST00000414008 CAPN15O75808 1086 aa19.73■□□□□ 0.75
HCG27-202ENST00000414008 SPINK5Q9NQ38 1064 aaPredicted RBP19.72■□□□□ 0.75
HCG27-202ENST00000414008 ATXN8OSP0DMR3 200 aa19.61■□□□□ 0.73
HCG27-202ENST00000414008 ZNF219Q9P2Y4 722 aaPredicted RBP19.61■□□□□ 0.73
HCG27-202ENST00000414008 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
HCG27-202ENST00000414008 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
HCG27-202ENST00000414008 DSG3P32926 999 aa19.38■□□□□ 0.69
HCG27-202ENST00000414008 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
HCG27-202ENST00000414008 ABCB7O75027 752 aa19.29■□□□□ 0.68
HCG27-202ENST00000414008 POLA2Q14181 598 aa19.22■□□□□ 0.67
HCG27-202ENST00000414008 NACADO15069 1562 aa19.18■□□□□ 0.66
HCG27-202ENST00000414008 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
HCG27-202ENST00000414008 ZCCHC6Q5VYS8 1495 aaKnown RBP19.17■□□□□ 0.66
HCG27-202ENST00000414008 MYO15BQ96JP2 1530 aa19.1■□□□□ 0.65
HCG27-202ENST00000414008 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
HCG27-202ENST00000414008 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
HCG27-202ENST00000414008 FBLN2P98095 1184 aa18.81■□□□□ 0.6
HCG27-202ENST00000414008 PABPN1Q86U42 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
HCG27-202ENST00000414008 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
HCG27-202ENST00000414008 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
HCG27-202ENST00000414008 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
HCG27-202ENST00000414008 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
HCG27-202ENST00000414008 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
HCG27-202ENST00000414008 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
HCG27-202ENST00000414008 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
HCG27-202ENST00000414008 SPDYE2BA6NHP3 402 aa18.39■□□□□ 0.53
HCG27-202ENST00000414008 SPDYE6P0CI01 402 aa18.39■□□□□ 0.53
HCG27-202ENST00000414008 SPDYE2Q495Y8 402 aa18.39■□□□□ 0.53
HCG27-202ENST00000414008 ZNF692Q9BU19 519 aaPredicted RBP18.3■□□□□ 0.52
HCG27-202ENST00000414008 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
HCG27-202ENST00000414008 SPDYE4A6NLX3 237 aa18.21■□□□□ 0.51
HCG27-202ENST00000414008 SSUH2Q9Y2M2 353 aa18.18■□□□□ 0.5
HCG27-202ENST00000414008 EIF4G1Q04637 1599 aaKnown RBP18.09■□□□□ 0.49
HCG27-202ENST00000414008 FKBP8Q14318 412 aa18.06■□□□□ 0.48
HCG27-202ENST00000414008 REM2Q8IYK8 340 aaPredicted RBP18.06■□□□□ 0.48
HCG27-202ENST00000414008 CC2D2AQ9P2K1 1620 aa18■□□□□ 0.47
HCG27-202ENST00000414008 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
HCG27-202ENST00000414008 SPDYE1Q8NFV5 336 aaPredicted RBP17.91■□□□□ 0.46
HCG27-202ENST00000414008 PITPNM1O00562 1244 aa17.83■□□□□ 0.44
HCG27-202ENST00000414008 CLEC11AQ9Y240 323 aa17.83■□□□□ 0.44
HCG27-202ENST00000414008 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
HCG27-202ENST00000414008 PROM2Q8N271 834 aa17.82■□□□□ 0.44
HCG27-202ENST00000414008 SMARCA4P51532 1647 aa17.81■□□□□ 0.44
HCG27-202ENST00000414008 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
HCG27-202ENST00000414008 STAG3Q9UJ98 1225 aa17.77■□□□□ 0.44
HCG27-202ENST00000414008 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
HCG27-202ENST00000414008 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
HCG27-202ENST00000414008 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
HCG27-202ENST00000414008 SMARCA2P51531 1590 aa17.7■□□□□ 0.42
HCG27-202ENST00000414008 PRR29P0C7W0 189 aa17.65■□□□□ 0.42
HCG27-202ENST00000414008 PEG3Q9GZU2 1588 aa17.64■□□□□ 0.41
HCG27-202ENST00000414008 HMGXB3Q12766 1538 aa17.6■□□□□ 0.41
HCG27-202ENST00000414008 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
HCG27-202ENST00000414008 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
HCG27-202ENST00000414008 FBXO3Q9UK99 471 aa17.55■□□□□ 0.4
HCG27-202ENST00000414008 FXR2P51116 673 aaKnown RBP eCLIP17.54■□□□□ 0.4
HCG27-202ENST00000414008 WIZO95785 1651 aa17.52■□□□□ 0.4
HCG27-202ENST00000414008 PIP4P2Q8N4L2 257 aa17.51■□□□□ 0.39
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