RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
TNFRSF8-202ENST00000413146 MAPKBP1O60336 1514 aa27.53■■■□□ 2
TNFRSF8-202ENST00000413146 PCF11O94913 1555 aaKnown RBP27.52■■■□□ 2
TNFRSF8-202ENST00000413146 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
TNFRSF8-202ENST00000413146 FANCD2Q9BXW9 1451 aa27.5■■□□□ 1.99
TNFRSF8-202ENST00000413146 SETD5Q9C0A6 1442 aa27.5■■□□□ 1.99
TNFRSF8-202ENST00000413146 PHLDB1Q86UU1 1377 aa27.49■■□□□ 1.99
TNFRSF8-202ENST00000413146 NESP48681 1621 aa27.47■■□□□ 1.99
TNFRSF8-202ENST00000413146 DNMBPQ6XZF7 1577 aa27.45■■□□□ 1.99
TNFRSF8-202ENST00000413146 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
TNFRSF8-202ENST00000413146 FAM50AQ14320 339 aaKnown RBP27.41■■□□□ 1.98
TNFRSF8-202ENST00000413146 ABCA10Q8WWZ4 1543 aa27.4■■□□□ 1.98
TNFRSF8-202ENST00000413146 P3H3Q8IVL6 736 aa27.39■■□□□ 1.98
TNFRSF8-202ENST00000413146 FYCO1Q9BQS8 1478 aa27.39■■□□□ 1.97
TNFRSF8-202ENST00000413146 CUL7Q14999 1698 aa27.37■■□□□ 1.97
TNFRSF8-202ENST00000413146 RAD54L2Q9Y4B4 1467 aa27.37■■□□□ 1.97
TNFRSF8-202ENST00000413146 FHOD3Q2V2M9 1422 aa27.36■■□□□ 1.97
TNFRSF8-202ENST00000413146 CTTNBP2Q8WZ74 1663 aa27.36■■□□□ 1.97
TNFRSF8-202ENST00000413146 ATP1B4Q9UN42 357 aaPredicted RBP27.35■■□□□ 1.97
TNFRSF8-202ENST00000413146 TOPBP1Q92547 1522 aa27.35■■□□□ 1.97
TNFRSF8-202ENST00000413146 POLA1P09884 1462 aaPredicted RBP27.35■■□□□ 1.97
TNFRSF8-202ENST00000413146 CASKIN1Q8WXD9 1431 aa27.32■■□□□ 1.96
TNFRSF8-202ENST00000413146 AQRO60306 1485 aaKnown RBP eCLIP27.31■■□□□ 1.96
TNFRSF8-202ENST00000413146 WDR97A6NE52 1622 aa27.27■■□□□ 1.96
TNFRSF8-202ENST00000413146 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
TNFRSF8-202ENST00000413146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.25■■□□□ 1.95
TNFRSF8-202ENST00000413146 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
TNFRSF8-202ENST00000413146 FMN1Q68DA7 1419 aa27.22■■□□□ 1.95
TNFRSF8-202ENST00000413146 SUPT16HQ9Y5B9 1047 aaKnown RBP27.21■■□□□ 1.95
TNFRSF8-202ENST00000413146 MYT1Q01538 1121 aa27.21■■□□□ 1.95
TNFRSF8-202ENST00000413146 TIMELESSQ9UNS1 1208 aa27.21■■□□□ 1.95
TNFRSF8-202ENST00000413146 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
TNFRSF8-202ENST00000413146 FGD6Q6ZV73 1430 aa27.15■■□□□ 1.94
TNFRSF8-202ENST00000413146 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
TNFRSF8-202ENST00000413146 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
TNFRSF8-202ENST00000413146 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
TNFRSF8-202ENST00000413146 DDX10Q13206 875 aaKnown RBP27.09■■□□□ 1.93
TNFRSF8-202ENST00000413146 SAMD9Q5K651 1589 aa27.09■■□□□ 1.93
TNFRSF8-202ENST00000413146 KCNH8Q96L42 1107 aa27.08■■□□□ 1.93
TNFRSF8-202ENST00000413146 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
TNFRSF8-202ENST00000413146 CCDC18Q5T9S5 1454 aa27.05■■□□□ 1.92
TNFRSF8-202ENST00000413146 LRRIQ1Q96JM4 1722 aa27.04■■□□□ 1.92
TNFRSF8-202ENST00000413146 PPP1R15AO75807 674 aaPredicted RBP27.04■■□□□ 1.92
TNFRSF8-202ENST00000413146 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.91
TNFRSF8-202ENST00000413146 HFM1A2PYH4 1435 aa27.01■■□□□ 1.91
TNFRSF8-202ENST00000413146 PTPN23Q9H3S7 1636 aa27■■□□□ 1.91
TNFRSF8-202ENST00000413146 GAPVD1Q14C86 1478 aa27■■□□□ 1.91
TNFRSF8-202ENST00000413146 SUPT6HQ7KZ85 1726 aaKnown RBP26.99■■□□□ 1.91
TNFRSF8-202ENST00000413146 TDRD9Q8NDG6 1382 aaKnown RBP26.99■■□□□ 1.91
TNFRSF8-202ENST00000413146 TONSLQ96HA7 1378 aa26.98■■□□□ 1.91
TNFRSF8-202ENST00000413146 UACAQ9BZF9 1416 aa26.98■■□□□ 1.91
TNFRSF8-202ENST00000413146 GRIN2BQ13224 1484 aa26.98■■□□□ 1.91
TNFRSF8-202ENST00000413146 NCOA2Q15596 1464 aa26.98■■□□□ 1.91
TNFRSF8-202ENST00000413146 MYOM3Q5VTT5 1437 aa26.96■■□□□ 1.91
TNFRSF8-202ENST00000413146 EHBP1L1Q8N3D4 1523 aa26.95■■□□□ 1.91
TNFRSF8-202ENST00000413146 PTPRKQ15262 1439 aa26.95■■□□□ 1.91
TNFRSF8-202ENST00000413146 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
TNFRSF8-202ENST00000413146 HIRIP3Q9BW71 556 aaPredicted RBP26.92■■□□□ 1.9
TNFRSF8-202ENST00000413146 NAIPQ13075 1403 aa26.89■■□□□ 1.9
TNFRSF8-202ENST00000413146 CCER2I3L3R5 266 aa26.87■■□□□ 1.89
TNFRSF8-202ENST00000413146 ANP32CO43423 234 aa26.87■■□□□ 1.89
TNFRSF8-202ENST00000413146 UGGT2Q9NYU1 1516 aa26.85■■□□□ 1.89
TNFRSF8-202ENST00000413146 ERCC6Q03468 1493 aa26.83■■□□□ 1.89
TNFRSF8-202ENST00000413146 ARHGEF11O15085 1522 aa26.81■■□□□ 1.88
TNFRSF8-202ENST00000413146 WDR62O43379 1518 aa26.81■■□□□ 1.88
TNFRSF8-202ENST00000413146 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
TNFRSF8-202ENST00000413146 HECW1Q76N89 1606 aa26.79■■□□□ 1.88
TNFRSF8-202ENST00000413146 MAGI3Q5TCQ9 1506 aa26.78■■□□□ 1.88
TNFRSF8-202ENST00000413146 TSHZ2Q9NRE2 1034 aa26.77■■□□□ 1.88
TNFRSF8-202ENST00000413146 GCC2Q8IWJ2 1684 aa26.77■■□□□ 1.88
TNFRSF8-202ENST00000413146 PBRM1Q86U86 1689 aa26.75■■□□□ 1.87
TNFRSF8-202ENST00000413146 TCOF1Q13428 1488 aaKnown RBP26.74■■□□□ 1.87
TNFRSF8-202ENST00000413146 FKBP8Q14318 412 aa26.73■■□□□ 1.87
TNFRSF8-202ENST00000413146 KDM5BQ9UGL1 1544 aa26.72■■□□□ 1.87
TNFRSF8-202ENST00000413146 IQGAP2Q13576 1575 aa26.71■■□□□ 1.87
TNFRSF8-202ENST00000413146 BCANQ96GW7 911 aa26.7■■□□□ 1.86
TNFRSF8-202ENST00000413146 NEFLP07196 543 aa26.69■■□□□ 1.86
TNFRSF8-202ENST00000413146 TRIM52Q96A61 297 aa26.68■■□□□ 1.86
TNFRSF8-202ENST00000413146 RRP7BPQ9NSQ0 103 aa26.68■■□□□ 1.86
TNFRSF8-202ENST00000413146 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
TNFRSF8-202ENST00000413146 EPRSP07814 1512 aaKnown RBP26.67■■□□□ 1.86
TNFRSF8-202ENST00000413146 ADAMTS12P58397 1594 aa26.64■■□□□ 1.86
TNFRSF8-202ENST00000413146 CHIC2Q9UKJ5 165 aa26.64■■□□□ 1.86
TNFRSF8-202ENST00000413146 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
TNFRSF8-202ENST00000413146 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
TNFRSF8-202ENST00000413146 CDK13Q14004 1512 aaKnown RBP26.6■■□□□ 1.85
TNFRSF8-202ENST00000413146 KDM6BO15054 1643 aa26.59■■□□□ 1.85
TNFRSF8-202ENST00000413146 DENND4BO75064 1496 aaPredicted RBP26.59■■□□□ 1.85
TNFRSF8-202ENST00000413146 HSPA5P11021 654 aaKnown RBP26.52■■□□□ 1.84
TNFRSF8-202ENST00000413146 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
TNFRSF8-202ENST00000413146 WASHC2AQ641Q2 1341 aa26.49■■□□□ 1.83
TNFRSF8-202ENST00000413146 EIF4G2P78344 907 aaKnown RBP eCLIP26.48■■□□□ 1.836e-6■■■■□ 25.1
TNFRSF8-202ENST00000413146 ARID3CA6NKF2 412 aa26.46■■□□□ 1.83
TNFRSF8-202ENST00000413146 ZNF608Q9ULD9 1512 aaPredicted RBP26.45■■□□□ 1.82
TNFRSF8-202ENST00000413146 DAPK1P53355 1430 aa26.43■■□□□ 1.82
TNFRSF8-202ENST00000413146 HNRNPUQ00839 825 aaKnown RBP eCLIP26.43■■□□□ 1.82
TNFRSF8-202ENST00000413146 ROCK1Q13464 1354 aa26.43■■□□□ 1.82
TNFRSF8-202ENST00000413146 DNMT1P26358 1616 aaKnown RBP26.43■■□□□ 1.82
TNFRSF8-202ENST00000413146 KIAA0556O60303 1618 aa26.41■■□□□ 1.82
TNFRSF8-202ENST00000413146 CNTLNQ9NXG0 1405 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms