RNA–Protein interactions for RNA: ENST00000412112.3

LINC01965-201, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 3 BASIC

Gene LINC01965, Length 1,378 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-201ENST00000412112 CEP164Q9UPV0 1460 aa17.96■□□□□ 0.47
LINC01965-201ENST00000412112 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
LINC01965-201ENST00000412112 SSUH2Q9Y2M2 353 aa17.95■□□□□ 0.46
LINC01965-201ENST00000412112 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
LINC01965-201ENST00000412112 WDR62O43379 1518 aa17.9■□□□□ 0.46
LINC01965-201ENST00000412112 CCDC88BA6NC98 1476 aa17.9■□□□□ 0.46
LINC01965-201ENST00000412112 PITPNM1O00562 1244 aa17.88■□□□□ 0.45
LINC01965-201ENST00000412112 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
LINC01965-201ENST00000412112 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
LINC01965-201ENST00000412112 SPDYE1Q8NFV5 336 aaPredicted RBP17.73■□□□□ 0.43
LINC01965-201ENST00000412112 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
LINC01965-201ENST00000412112 FXR2P51116 673 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC01965-201ENST00000412112 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
LINC01965-201ENST00000412112 SUPT5HO00267 1087 aaKnown RBP17.65■□□□□ 0.42
LINC01965-201ENST00000412112 CLEC11AQ9Y240 323 aa17.63■□□□□ 0.41
LINC01965-201ENST00000412112 TOPBP1Q92547 1522 aa17.62■□□□□ 0.41
LINC01965-201ENST00000412112 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
LINC01965-201ENST00000412112 SPDYE4A6NLX3 237 aa17.58■□□□□ 0.4
LINC01965-201ENST00000412112 DNMBPQ6XZF7 1577 aa17.57■□□□□ 0.4
LINC01965-201ENST00000412112 ZNF608Q9ULD9 1512 aaPredicted RBP17.51■□□□□ 0.39
LINC01965-201ENST00000412112 POLA1P09884 1462 aaPredicted RBP17.46■□□□□ 0.39
LINC01965-201ENST00000412112 SOGA1O94964 1423 aa17.42■□□□□ 0.38
LINC01965-201ENST00000412112 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
LINC01965-201ENST00000412112 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC01965-201ENST00000412112 EIF4G3O43432 1585 aaKnown RBP17.41■□□□□ 0.38
LINC01965-201ENST00000412112 PRR29P0C7W0 189 aa17.4■□□□□ 0.38
LINC01965-201ENST00000412112 PRKAR2AP13861 404 aaKnown RBP17.4■□□□□ 0.38
LINC01965-201ENST00000412112 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.37
LINC01965-201ENST00000412112 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
LINC01965-201ENST00000412112 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
LINC01965-201ENST00000412112 CUX1P39880 1505 aa17.37■□□□□ 0.37
LINC01965-201ENST00000412112 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
LINC01965-201ENST00000412112 STAG3Q9UJ98 1225 aa17.3■□□□□ 0.36
LINC01965-201ENST00000412112 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
LINC01965-201ENST00000412112 CHADLQ6NUI6 762 aa17.27■□□□□ 0.35
LINC01965-201ENST00000412112 PROM2Q8N271 834 aa17.27■□□□□ 0.35
LINC01965-201ENST00000412112 HAX1O00165 279 aa17.25■□□□□ 0.35
LINC01965-201ENST00000412112 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
LINC01965-201ENST00000412112 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
LINC01965-201ENST00000412112 CHMP7Q8WUX9 453 aaPredicted RBP17.23■□□□□ 0.35
LINC01965-201ENST00000412112 CHD1O14646 1710 aa17.22■□□□□ 0.35
LINC01965-201ENST00000412112 WRNQ14191 1432 aaPredicted RBP eCLIP17.22■□□□□ 0.35
LINC01965-201ENST00000412112 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
LINC01965-201ENST00000412112 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
LINC01965-201ENST00000412112 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
LINC01965-201ENST00000412112 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
LINC01965-201ENST00000412112 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
LINC01965-201ENST00000412112 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
LINC01965-201ENST00000412112 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
LINC01965-201ENST00000412112 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
LINC01965-201ENST00000412112 SP7Q8TDD2 431 aaPredicted RBP17.15■□□□□ 0.34
LINC01965-201ENST00000412112 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
LINC01965-201ENST00000412112 BIVM-ERCC5R4GMW8 1640 aa17.13■□□□□ 0.33
LINC01965-201ENST00000412112 SYNJ1O43426 1573 aa17.12■□□□□ 0.33
LINC01965-201ENST00000412112 ABCA5Q8WWZ7 1642 aa17.11■□□□□ 0.33
LINC01965-201ENST00000412112 PBRM1Q86U86 1689 aa17.11■□□□□ 0.33
LINC01965-201ENST00000412112 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
LINC01965-201ENST00000412112 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
LINC01965-201ENST00000412112 C19orf67A6NJJ6 358 aa17.08■□□□□ 0.32
LINC01965-201ENST00000412112 FARP1Q9Y4F1 1045 aaPredicted RBP17.08■□□□□ 0.32
LINC01965-201ENST00000412112 EVX2Q03828 476 aa17.07■□□□□ 0.32
LINC01965-201ENST00000412112 FKBP8Q14318 412 aa17.05■□□□□ 0.32
LINC01965-201ENST00000412112 CLASP1Q7Z460 1538 aa17.05■□□□□ 0.32
LINC01965-201ENST00000412112 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
LINC01965-201ENST00000412112 FHAD1B1AJZ9 1412 aa17■□□□□ 0.31
LINC01965-201ENST00000412112 GRIN2AQ12879 1464 aa16.99■□□□□ 0.31
LINC01965-201ENST00000412112 ERICH3Q5RHP9 1530 aa16.99■□□□□ 0.31
LINC01965-201ENST00000412112 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
LINC01965-201ENST00000412112 NUP160Q12769 1436 aa16.93■□□□□ 0.3
LINC01965-201ENST00000412112 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
LINC01965-201ENST00000412112 CEP170Q5SW79 1584 aa16.9■□□□□ 0.3
LINC01965-201ENST00000412112 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.29
LINC01965-201ENST00000412112 MNX1P50219 401 aaPredicted RBP16.85■□□□□ 0.29
LINC01965-201ENST00000412112 IGF1RP08069 1367 aa16.84■□□□□ 0.29
LINC01965-201ENST00000412112 JPH4Q96JJ6 628 aa16.81■□□□□ 0.28
LINC01965-201ENST00000412112 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
LINC01965-201ENST00000412112 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
LINC01965-201ENST00000412112 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
LINC01965-201ENST00000412112 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
LINC01965-201ENST00000412112 CUL7Q14999 1698 aa16.76■□□□□ 0.27
LINC01965-201ENST00000412112 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
LINC01965-201ENST00000412112 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
LINC01965-201ENST00000412112 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
LINC01965-201ENST00000412112 GABBR2O75899 941 aa16.72■□□□□ 0.27
LINC01965-201ENST00000412112 MIER1Q8N108 512 aa16.71■□□□□ 0.27
LINC01965-201ENST00000412112 PLEKHG5O94827 1062 aa16.68■□□□□ 0.26
LINC01965-201ENST00000412112 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
LINC01965-201ENST00000412112 ZNF579Q8NAF0 562 aaKnown RBP16.67■□□□□ 0.26
LINC01965-201ENST00000412112 PAK3O75914 559 aaPredicted RBP16.64■□□□□ 0.25
LINC01965-201ENST00000412112 CLCN6P51797 869 aa16.63■□□□□ 0.25
LINC01965-201ENST00000412112 PLCD3Q8N3E9 789 aa16.63■□□□□ 0.25
LINC01965-201ENST00000412112 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
LINC01965-201ENST00000412112 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
LINC01965-201ENST00000412112 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
LINC01965-201ENST00000412112 TTBK1Q5TCY1 1321 aaPredicted RBP16.56■□□□□ 0.24
LINC01965-201ENST00000412112 PTPRGP23470 1445 aa16.56■□□□□ 0.24
LINC01965-201ENST00000412112 IQGAP2Q13576 1575 aa16.56■□□□□ 0.24
LINC01965-201ENST00000412112 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
LINC01965-201ENST00000412112 ZBTB47Q9UFB7 747 aaPredicted RBP16.51■□□□□ 0.23
LINC01965-201ENST00000412112 PHF12Q96QT6 1004 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms