RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
ITGA6-203ENST00000409532 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
ITGA6-203ENST00000409532 FHOD3Q2V2M9 1422 aa16.22■□□□□ 0.19
ITGA6-203ENST00000409532 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
ITGA6-203ENST00000409532 FANCD2Q9BXW9 1451 aa16.2■□□□□ 0.18
ITGA6-203ENST00000409532 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
ITGA6-203ENST00000409532 DDX10Q13206 875 aaKnown RBP16.18■□□□□ 0.18
ITGA6-203ENST00000409532 NESP48681 1621 aa16.17■□□□□ 0.18
ITGA6-203ENST00000409532 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
ITGA6-203ENST00000409532 PRDM2Q13029 1718 aa16.17■□□□□ 0.18
ITGA6-203ENST00000409532 MAPKBP1O60336 1514 aa16.15■□□□□ 0.18
ITGA6-203ENST00000409532 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
ITGA6-203ENST00000409532 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
ITGA6-203ENST00000409532 SUPT16HQ9Y5B9 1047 aaKnown RBP16.11■□□□□ 0.17
ITGA6-203ENST00000409532 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
ITGA6-203ENST00000409532 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
ITGA6-203ENST00000409532 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
ITGA6-203ENST00000409532 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
ITGA6-203ENST00000409532 MAP3K1Q13233 1512 aa16.07■□□□□ 0.16
ITGA6-203ENST00000409532 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
ITGA6-203ENST00000409532 BCANQ96GW7 911 aa16.05■□□□□ 0.16
ITGA6-203ENST00000409532 ARID3CA6NKF2 412 aa16.04■□□□□ 0.16
ITGA6-203ENST00000409532 MTUS2Q5JR59 1369 aa16.04■□□□□ 0.16
ITGA6-203ENST00000409532 DNMBPQ6XZF7 1577 aa16.03■□□□□ 0.16
ITGA6-203ENST00000409532 ABCA10Q8WWZ4 1543 aa16.02■□□□□ 0.15
ITGA6-203ENST00000409532 PPP1R15AO75807 674 aaPredicted RBP16■□□□□ 0.15
ITGA6-203ENST00000409532 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
ITGA6-203ENST00000409532 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
ITGA6-203ENST00000409532 CHIC2Q9UKJ5 165 aa15.99■□□□□ 0.15
ITGA6-203ENST00000409532 FYCO1Q9BQS8 1478 aa15.98■□□□□ 0.15
ITGA6-203ENST00000409532 TRIM52Q96A61 297 aa15.98■□□□□ 0.15
ITGA6-203ENST00000409532 TONSLQ96HA7 1378 aa15.96■□□□□ 0.15
ITGA6-203ENST00000409532 FGD6Q6ZV73 1430 aa15.96■□□□□ 0.15
ITGA6-203ENST00000409532 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.15
ITGA6-203ENST00000409532 FMN1Q68DA7 1419 aa15.95■□□□□ 0.14
ITGA6-203ENST00000409532 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
ITGA6-203ENST00000409532 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
ITGA6-203ENST00000409532 EFCAB5A4FU69 1503 aa15.93■□□□□ 0.14
ITGA6-203ENST00000409532 FKBP8Q14318 412 aa15.92■□□□□ 0.14
ITGA6-203ENST00000409532 ANP32CO43423 234 aa15.92■□□□□ 0.14
ITGA6-203ENST00000409532 CCDC18Q5T9S5 1454 aa15.91■□□□□ 0.14
ITGA6-203ENST00000409532 CTTNBP2Q8WZ74 1663 aa15.91■□□□□ 0.14
ITGA6-203ENST00000409532 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
ITGA6-203ENST00000409532 CUL7Q14999 1698 aa15.89■□□□□ 0.14
ITGA6-203ENST00000409532 SNAPC4Q5SXM2 1469 aa15.89■□□□□ 0.13
ITGA6-203ENST00000409532 TIMELESSQ9UNS1 1208 aa15.89■□□□□ 0.13
ITGA6-203ENST00000409532 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
ITGA6-203ENST00000409532 NCOA2Q15596 1464 aa15.87■□□□□ 0.13
ITGA6-203ENST00000409532 TSHZ2Q9NRE2 1034 aa15.85■□□□□ 0.13
ITGA6-203ENST00000409532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.84■□□□□ 0.13
ITGA6-203ENST00000409532 FOXD1Q16676 465 aa15.84■□□□□ 0.13
ITGA6-203ENST00000409532 MYOM3Q5VTT5 1437 aa15.84■□□□□ 0.13
ITGA6-203ENST00000409532 NAIPQ13075 1403 aa15.83■□□□□ 0.12
ITGA6-203ENST00000409532 HFM1A2PYH4 1435 aa15.83■□□□□ 0.12
ITGA6-203ENST00000409532 UACAQ9BZF9 1416 aa15.83■□□□□ 0.12
ITGA6-203ENST00000409532 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
ITGA6-203ENST00000409532 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
ITGA6-203ENST00000409532 PTPN23Q9H3S7 1636 aa15.8■□□□□ 0.12
ITGA6-203ENST00000409532 NEFLP07196 543 aa15.8■□□□□ 0.12
ITGA6-203ENST00000409532 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
ITGA6-203ENST00000409532 LAMC3Q9Y6N6 1575 aa15.79■□□□□ 0.12
ITGA6-203ENST00000409532 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
ITGA6-203ENST00000409532 MAGI3Q5TCQ9 1506 aa15.77■□□□□ 0.11
ITGA6-203ENST00000409532 SAMD9Q5K651 1589 aa15.76■□□□□ 0.11
ITGA6-203ENST00000409532 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
ITGA6-203ENST00000409532 HSPA5P11021 654 aaKnown RBP15.75■□□□□ 0.11
ITGA6-203ENST00000409532 SUPT6HQ7KZ85 1726 aaKnown RBP15.75■□□□□ 0.11
ITGA6-203ENST00000409532 HNRNPUQ00839 825 aaKnown RBP eCLIP15.74■□□□□ 0.11
ITGA6-203ENST00000409532 KIF21AQ7Z4S6 1674 aa15.74■□□□□ 0.11
ITGA6-203ENST00000409532 CNGB1Q14028 1251 aaPredicted RBP15.74■□□□□ 0.11
ITGA6-203ENST00000409532 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
ITGA6-203ENST00000409532 IRX6P78412 446 aaPredicted RBP15.73■□□□□ 0.11
ITGA6-203ENST00000409532 EHBP1L1Q8N3D4 1523 aa15.72■□□□□ 0.11
ITGA6-203ENST00000409532 MPHOSPH9Q99550 1183 aa15.72■□□□□ 0.11
ITGA6-203ENST00000409532 MYT1Q01538 1121 aa15.71■□□□□ 0.11
ITGA6-203ENST00000409532 L3MBTL2Q969R5 705 aa15.71■□□□□ 0.1
ITGA6-203ENST00000409532 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
ITGA6-203ENST00000409532 UGGT2Q9NYU1 1516 aa15.7■□□□□ 0.1
ITGA6-203ENST00000409532 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
ITGA6-203ENST00000409532 KDM6BO15054 1643 aa15.68■□□□□ 0.1
ITGA6-203ENST00000409532 EIF4G2P78344 907 aaKnown RBP eCLIP15.68■□□□□ 0.1
ITGA6-203ENST00000409532 EPRSP07814 1512 aaKnown RBP15.67■□□□□ 0.1
ITGA6-203ENST00000409532 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
ITGA6-203ENST00000409532 TARBP1Q13395 1621 aaKnown RBP15.65■□□□□ 0.1
ITGA6-203ENST00000409532 C11orf95C9JLR9 678 aaPredicted RBP15.65■□□□□ 0.1
ITGA6-203ENST00000409532 ZNF777Q9ULD5 760 aaPredicted RBP15.65■□□□□ 0.1
ITGA6-203ENST00000409532 POLR3GLQ9BT43 218 aa15.64■□□□□ 0.09
ITGA6-203ENST00000409532 DENND4BO75064 1496 aaPredicted RBP15.64■□□□□ 0.09
ITGA6-203ENST00000409532 FBLN2P98095 1184 aa15.64■□□□□ 0.09
ITGA6-203ENST00000409532 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
ITGA6-203ENST00000409532 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
ITGA6-203ENST00000409532 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
ITGA6-203ENST00000409532 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
ITGA6-203ENST00000409532 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
ITGA6-203ENST00000409532 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
ITGA6-203ENST00000409532 HECW1Q76N89 1606 aa15.62■□□□□ 0.09
ITGA6-203ENST00000409532 NBPF8Q3BBV2 869 aa15.61■□□□□ 0.09
ITGA6-203ENST00000409532 ZNF608Q9ULD9 1512 aaPredicted RBP15.61■□□□□ 0.09
ITGA6-203ENST00000409532 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
ITGA6-203ENST00000409532 PBRM1Q86U86 1689 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms