RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
PACSIN2-205ENST00000407585 IGF1RP08069 1367 aa24.5■■□□□ 1.51
PACSIN2-205ENST00000407585 CFTRP13569 1480 aa24.48■■□□□ 1.51
PACSIN2-205ENST00000407585 PHLDB1Q86UU1 1377 aa24.48■■□□□ 1.51
PACSIN2-205ENST00000407585 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
PACSIN2-205ENST00000407585 CARMIL1Q5VZK9 1371 aa24.46■■□□□ 1.51
PACSIN2-205ENST00000407585 TIAM1Q13009 1591 aa24.45■■□□□ 1.51
PACSIN2-205ENST00000407585 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
PACSIN2-205ENST00000407585 NEFLP07196 543 aa24.43■■□□□ 1.5
PACSIN2-205ENST00000407585 TRIM52Q96A61 297 aa24.43■■□□□ 1.5
PACSIN2-205ENST00000407585 LRRC9Q6ZRR7 1453 aa24.43■■□□□ 1.5
PACSIN2-205ENST00000407585 ANP32CO43423 234 aa24.38■■□□□ 1.49
PACSIN2-205ENST00000407585 ANP32EQ9BTT0 268 aa24.38■■□□□ 1.49
PACSIN2-205ENST00000407585 PPP1R15AO75807 674 aaPredicted RBP24.36■■□□□ 1.49
PACSIN2-205ENST00000407585 FHAD1B1AJZ9 1412 aa24.33■■□□□ 1.48
PACSIN2-205ENST00000407585 MAP3K1Q13233 1512 aa24.32■■□□□ 1.48
PACSIN2-205ENST00000407585 TIMELESSQ9UNS1 1208 aa24.28■■□□□ 1.48
PACSIN2-205ENST00000407585 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
PACSIN2-205ENST00000407585 FHOD3Q2V2M9 1422 aa24.26■■□□□ 1.47
PACSIN2-205ENST00000407585 TONSLQ96HA7 1378 aa24.25■■□□□ 1.47
PACSIN2-205ENST00000407585 CCER2I3L3R5 266 aa24.23■■□□□ 1.47
PACSIN2-205ENST00000407585 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
PACSIN2-205ENST00000407585 PCF11O94913 1555 aaKnown RBP24.22■■□□□ 1.47
PACSIN2-205ENST00000407585 RBM19Q9Y4C8 960 aaKnown RBP24.16■■□□□ 1.46
PACSIN2-205ENST00000407585 CFAP43Q8NDM7 1665 aa24.11■■□□□ 1.45
PACSIN2-205ENST00000407585 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
PACSIN2-205ENST00000407585 HNRNPUQ00839 825 aaKnown RBP eCLIP24.09■■□□□ 1.45
PACSIN2-205ENST00000407585 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
PACSIN2-205ENST00000407585 FYCO1Q9BQS8 1478 aa24.07■■□□□ 1.44
PACSIN2-205ENST00000407585 IRX6P78412 446 aaPredicted RBP24.07■■□□□ 1.44
PACSIN2-205ENST00000407585 CCDC18Q5T9S5 1454 aa24.06■■□□□ 1.44
PACSIN2-205ENST00000407585 FGD6Q6ZV73 1430 aa24.06■■□□□ 1.44
PACSIN2-205ENST00000407585 CASKIN1Q8WXD9 1431 aa24.06■■□□□ 1.44
PACSIN2-205ENST00000407585 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
PACSIN2-205ENST00000407585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.01■■□□□ 1.43
PACSIN2-205ENST00000407585 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
PACSIN2-205ENST00000407585 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
PACSIN2-205ENST00000407585 UACAQ9BZF9 1416 aa23.98■■□□□ 1.43
PACSIN2-205ENST00000407585 CHIC2Q9UKJ5 165 aa23.97■■□□□ 1.43
PACSIN2-205ENST00000407585 FMN1Q68DA7 1419 aa23.97■■□□□ 1.43
PACSIN2-205ENST00000407585 RRP7BPQ9NSQ0 103 aa23.96■■□□□ 1.43
PACSIN2-205ENST00000407585 EFCAB5A4FU69 1503 aa23.95■■□□□ 1.43
PACSIN2-205ENST00000407585 HFM1A2PYH4 1435 aa23.94■■□□□ 1.42
PACSIN2-205ENST00000407585 AQRO60306 1485 aaKnown RBP eCLIP23.92■■□□□ 1.424e-9■■■□□ 15.2
PACSIN2-205ENST00000407585 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
PACSIN2-205ENST00000407585 CDK11AQ9UQ88 783 aaPredicted RBP23.9■■□□□ 1.42
PACSIN2-205ENST00000407585 POLA1P09884 1462 aaPredicted RBP23.9■■□□□ 1.42
PACSIN2-205ENST00000407585 NAIPQ13075 1403 aa23.89■■□□□ 1.42
PACSIN2-205ENST00000407585 ABCA10Q8WWZ4 1543 aa23.88■■□□□ 1.41
PACSIN2-205ENST00000407585 PTPN23Q9H3S7 1636 aa23.88■■□□□ 1.41
PACSIN2-205ENST00000407585 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
PACSIN2-205ENST00000407585 WASHC2AQ641Q2 1341 aa23.86■■□□□ 1.41
PACSIN2-205ENST00000407585 BCL11AQ9H165 835 aa23.85■■□□□ 1.41
PACSIN2-205ENST00000407585 MYOM3Q5VTT5 1437 aa23.85■■□□□ 1.41
PACSIN2-205ENST00000407585 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
PACSIN2-205ENST00000407585 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
PACSIN2-205ENST00000407585 SNAPC4Q5SXM2 1469 aa23.83■■□□□ 1.41
PACSIN2-205ENST00000407585 ERICH6Q7L0X2 663 aa23.83■■□□□ 1.41
PACSIN2-205ENST00000407585 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
PACSIN2-205ENST00000407585 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
PACSIN2-205ENST00000407585 MSH5O43196 834 aa23.82■■□□□ 1.4
PACSIN2-205ENST00000407585 FAM9BQ8IZU0 186 aa23.82■■□□□ 1.4
PACSIN2-205ENST00000407585 ARID3CA6NKF2 412 aa23.8■■□□□ 1.4
PACSIN2-205ENST00000407585 CCDC184Q52MB2 194 aa23.79■■□□□ 1.4
PACSIN2-205ENST00000407585 FOXD1Q16676 465 aa23.78■■□□□ 1.4
PACSIN2-205ENST00000407585 NESP48681 1621 aa23.78■■□□□ 1.4
PACSIN2-205ENST00000407585 CTTNBP2Q8WZ74 1663 aa23.78■■□□□ 1.4
PACSIN2-205ENST00000407585 CUL7Q14999 1698 aa23.77■■□□□ 1.4
PACSIN2-205ENST00000407585 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.39
PACSIN2-205ENST00000407585 CNGB1Q14028 1251 aaPredicted RBP23.73■■□□□ 1.39
PACSIN2-205ENST00000407585 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
PACSIN2-205ENST00000407585 L3MBTL2Q969R5 705 aa23.73■■□□□ 1.39
PACSIN2-205ENST00000407585 MPHOSPH9Q99550 1183 aa23.71■■□□□ 1.39
PACSIN2-205ENST00000407585 KDM5BQ9UGL1 1544 aa23.71■■□□□ 1.39
PACSIN2-205ENST00000407585 PPP4R2Q9NY27 417 aa23.7■■□□□ 1.38
PACSIN2-205ENST00000407585 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
PACSIN2-205ENST00000407585 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
PACSIN2-205ENST00000407585 SUPT6HQ7KZ85 1726 aaKnown RBP23.69■■□□□ 1.38
PACSIN2-205ENST00000407585 FANCIQ9NVI1 1328 aa23.67■■□□□ 1.38
PACSIN2-205ENST00000407585 B4GALNT3Q6L9W6 998 aa23.67■■□□□ 1.38
PACSIN2-205ENST00000407585 PRKRIP1Q9H875 184 aaPredicted RBP23.66■■□□□ 1.38
PACSIN2-205ENST00000407585 EHBP1L1Q8N3D4 1523 aa23.66■■□□□ 1.38
PACSIN2-205ENST00000407585 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
PACSIN2-205ENST00000407585 LRRIQ1Q96JM4 1722 aa23.63■■□□□ 1.37
PACSIN2-205ENST00000407585 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
PACSIN2-205ENST00000407585 POLR3GLQ9BT43 218 aa23.62■■□□□ 1.37
PACSIN2-205ENST00000407585 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
PACSIN2-205ENST00000407585 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
PACSIN2-205ENST00000407585 CCDC7Q96M83 1385 aa23.61■■□□□ 1.37
PACSIN2-205ENST00000407585 ERICH6BQ5W0A0 696 aa23.6■■□□□ 1.37
PACSIN2-205ENST00000407585 MAGI3Q5TCQ9 1506 aa23.59■■□□□ 1.37
PACSIN2-205ENST00000407585 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.37
PACSIN2-205ENST00000407585 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.37
PACSIN2-205ENST00000407585 NBPF8Q3BBV2 869 aa23.57■■□□□ 1.36
PACSIN2-205ENST00000407585 KDM6BO15054 1643 aa23.56■■□□□ 1.36
PACSIN2-205ENST00000407585 SLC4A1APQ9BWU0 796 aaKnown RBP23.54■■□□□ 1.36
PACSIN2-205ENST00000407585 ZBED9Q6R2W3 1325 aa23.54■■□□□ 1.36
PACSIN2-205ENST00000407585 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
PACSIN2-205ENST00000407585 NCOA1Q15788 1441 aa23.53■■□□□ 1.36
PACSIN2-205ENST00000407585 SENP3-EIF4A1A0A087X0R7 540 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms