RNA–Protein interactions for RNA: ENST00000403231.5

KIF3A-203, Transcript of kinesin family member 3A, humanhuman

TSL 2 BASIC

Gene KIF3A, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-203ENST00000403231 CHRDL2Q6WN34 429 aa7.59□□□□□ -1.2
KIF3A-203ENST00000403231 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
KIF3A-203ENST00000403231 SLC24A1O60721 1099 aa7.57□□□□□ -1.2
KIF3A-203ENST00000403231 EEA1Q15075 1411 aa7.57□□□□□ -1.2
KIF3A-203ENST00000403231 URB2Q14146 1524 aaKnown RBP7.57□□□□□ -1.2
KIF3A-203ENST00000403231 TOPBP1Q92547 1522 aa7.56□□□□□ -1.2
KIF3A-203ENST00000403231 ZBTB12Q9Y330 459 aaPredicted RBP7.56□□□□□ -1.2
KIF3A-203ENST00000403231 CUX2O14529 1486 aa7.56□□□□□ -1.2
KIF3A-203ENST00000403231 CEP162Q5TB80 1403 aa7.56□□□□□ -1.2
KIF3A-203ENST00000403231 CEP164Q9UPV0 1460 aa7.56□□□□□ -1.2
KIF3A-203ENST00000403231 TNIKQ9UKE5 1360 aa7.55□□□□□ -1.2
KIF3A-203ENST00000403231 GOLGA3Q08378 1498 aa7.55□□□□□ -1.2
KIF3A-203ENST00000403231 POLA1P09884 1462 aaPredicted RBP7.54□□□□□ -1.2
KIF3A-203ENST00000403231 AKT1S1Q96B36 256 aa7.54□□□□□ -1.2
KIF3A-203ENST00000403231 DNMBPQ6XZF7 1577 aa7.54□□□□□ -1.2
KIF3A-203ENST00000403231 KIF21BO75037 1637 aa7.53□□□□□ -1.2
KIF3A-203ENST00000403231 KIF27Q86VH2 1401 aa7.53□□□□□ -1.2
KIF3A-203ENST00000403231 PDS5BQ9NTI5 1447 aa7.53□□□□□ -1.2
KIF3A-203ENST00000403231 IGF1RP08069 1367 aa7.52□□□□□ -1.21
KIF3A-203ENST00000403231 POLA2Q14181 598 aa7.52□□□□□ -1.21
KIF3A-203ENST00000403231 TDRD9Q8NDG6 1382 aaKnown RBP7.52□□□□□ -1.21
KIF3A-203ENST00000403231 PRXQ9BXM0 1461 aa7.5□□□□□ -1.21
KIF3A-203ENST00000403231 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
KIF3A-203ENST00000403231 CLIP1P30622 1438 aa7.48□□□□□ -1.21
KIF3A-203ENST00000403231 CARMIL1Q5VZK9 1371 aa7.47□□□□□ -1.21
KIF3A-203ENST00000403231 P3H3Q8IVL6 736 aa7.47□□□□□ -1.21
KIF3A-203ENST00000403231 SLC4A1APQ9BWU0 796 aaKnown RBP7.47□□□□□ -1.21
KIF3A-203ENST00000403231 ABCA10Q8WWZ4 1543 aa7.46□□□□□ -1.22
KIF3A-203ENST00000403231 WDR97A6NE52 1622 aa7.46□□□□□ -1.22
KIF3A-203ENST00000403231 AQRO60306 1485 aaKnown RBP eCLIP7.45□□□□□ -1.229e-6■■□□□ 13.1
KIF3A-203ENST00000403231 SP7Q8TDD2 431 aaPredicted RBP7.45□□□□□ -1.22
KIF3A-203ENST00000403231 ERCC6Q03468 1493 aa7.45□□□□□ -1.22
KIF3A-203ENST00000403231 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
KIF3A-203ENST00000403231 ERICH3Q5RHP9 1530 aa7.44□□□□□ -1.22
KIF3A-203ENST00000403231 MRC2Q9UBG0 1479 aa7.44□□□□□ -1.22
KIF3A-203ENST00000403231 ZNF608Q9ULD9 1512 aaPredicted RBP7.43□□□□□ -1.22
KIF3A-203ENST00000403231 GAPVD1Q14C86 1478 aa7.42□□□□□ -1.22
KIF3A-203ENST00000403231 ABCA5Q8WWZ7 1642 aa7.41□□□□□ -1.22
KIF3A-203ENST00000403231 ARAP1Q96P48 1450 aa7.41□□□□□ -1.22
KIF3A-203ENST00000403231 PBRM1Q86U86 1689 aa7.4□□□□□ -1.23
KIF3A-203ENST00000403231 ARHGAP35Q9NRY4 1499 aa7.4□□□□□ -1.23
KIF3A-203ENST00000403231 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
KIF3A-203ENST00000403231 FOXD4L1Q9NU39 408 aa7.39□□□□□ -1.23
KIF3A-203ENST00000403231 KANK4Q5T7N3 995 aaPredicted RBP7.39□□□□□ -1.23
KIF3A-203ENST00000403231 ATP1B4Q9UN42 357 aaPredicted RBP7.39□□□□□ -1.23
KIF3A-203ENST00000403231 VPS8Q8N3P4 1428 aa7.38□□□□□ -1.23
KIF3A-203ENST00000403231 WDR62O43379 1518 aa7.38□□□□□ -1.23
KIF3A-203ENST00000403231 REM2Q8IYK8 340 aaPredicted RBP7.38□□□□□ -1.23
KIF3A-203ENST00000403231 HRCP23327 699 aa7.37□□□□□ -1.23
KIF3A-203ENST00000403231 CUL7Q14999 1698 aa7.37□□□□□ -1.23
KIF3A-203ENST00000403231 CTTNBP2Q8WZ74 1663 aa7.37□□□□□ -1.23
KIF3A-203ENST00000403231 FBLN2P98095 1184 aa7.36□□□□□ -1.23
KIF3A-203ENST00000403231 PIP4P2Q8N4L2 257 aa7.35□□□□□ -1.23
KIF3A-203ENST00000403231 FHOD3Q2V2M9 1422 aa7.34□□□□□ -1.23
KIF3A-203ENST00000403231 EIF4G3O43432 1585 aaKnown RBP7.34□□□□□ -1.23
KIF3A-203ENST00000403231 FXR2P51116 673 aaKnown RBP eCLIP7.34□□□□□ -1.23
KIF3A-203ENST00000403231 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
KIF3A-203ENST00000403231 GRIN2BQ13224 1484 aa7.32□□□□□ -1.24
KIF3A-203ENST00000403231 SNAPC4Q5SXM2 1469 aa7.32□□□□□ -1.24
KIF3A-203ENST00000403231 ARID3CA6NKF2 412 aa7.31□□□□□ -1.24
KIF3A-203ENST00000403231 ATXN8OSP0DMR3 200 aa7.31□□□□□ -1.24
KIF3A-203ENST00000403231 ADAMTS12P58397 1594 aa7.31□□□□□ -1.24
KIF3A-203ENST00000403231 FHAD1B1AJZ9 1412 aa7.3□□□□□ -1.24
KIF3A-203ENST00000403231 CHMP7Q8WUX9 453 aaPredicted RBP7.29□□□□□ -1.24
KIF3A-203ENST00000403231 LRRIQ1Q96JM4 1722 aa7.29□□□□□ -1.24
KIF3A-203ENST00000403231 PCF11O94913 1555 aaKnown RBP7.28□□□□□ -1.24
KIF3A-203ENST00000403231 ITGAEP38570 1179 aa7.27□□□□□ -1.24
KIF3A-203ENST00000403231 ATF5Q9Y2D1 282 aaPredicted RBP7.27□□□□□ -1.24
KIF3A-203ENST00000403231 PITPNM1O00562 1244 aa7.27□□□□□ -1.25
KIF3A-203ENST00000403231 ZBTB22O15209 634 aa7.26□□□□□ -1.25
KIF3A-203ENST00000403231 OSCARQ8IYS5 282 aa7.26□□□□□ -1.25
KIF3A-203ENST00000403231 GRIN2AQ12879 1464 aa7.26□□□□□ -1.25
KIF3A-203ENST00000403231 IQGAP2Q13576 1575 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 SAMD9Q5K651 1589 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 TIAM1Q13009 1591 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 CEP170Q5SW79 1584 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 SPDYE2BA6NHP3 402 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 HAX1O00165 279 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 SPDYE6P0CI01 402 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 SPDYE2Q495Y8 402 aa7.25□□□□□ -1.25
KIF3A-203ENST00000403231 CCER1Q8TC90 406 aaPredicted RBP7.25□□□□□ -1.25
KIF3A-203ENST00000403231 EFCAB5A4FU69 1503 aa7.23□□□□□ -1.25
KIF3A-203ENST00000403231 CHD1O14646 1710 aa7.23□□□□□ -1.25
KIF3A-203ENST00000403231 SYNJ2O15056 1496 aa7.22□□□□□ -1.25
KIF3A-203ENST00000403231 LRRC9Q6ZRR7 1453 aa7.22□□□□□ -1.25
KIF3A-203ENST00000403231 JPH4Q96JJ6 628 aa7.22□□□□□ -1.25
KIF3A-203ENST00000403231 MAGI1Q96QZ7 1491 aaPredicted RBP7.22□□□□□ -1.25
KIF3A-203ENST00000403231 PHLDB1Q86UU1 1377 aa7.21□□□□□ -1.25
KIF3A-203ENST00000403231 CASKIN1Q8WXD9 1431 aa7.21□□□□□ -1.25
KIF3A-203ENST00000403231 DISP1Q96F81 1524 aa7.21□□□□□ -1.26
KIF3A-203ENST00000403231 KIAA0586Q9BVV6 1533 aa7.21□□□□□ -1.26
KIF3A-203ENST00000403231 CFAP43Q8NDM7 1665 aa7.21□□□□□ -1.26
KIF3A-203ENST00000403231 FAM50AQ14320 339 aaKnown RBP7.2□□□□□ -1.26
KIF3A-203ENST00000403231 FMN1Q68DA7 1419 aa7.2□□□□□ -1.26
KIF3A-203ENST00000403231 FYCO1Q9BQS8 1478 aa7.2□□□□□ -1.26
KIF3A-203ENST00000403231 CDK13Q14004 1512 aaKnown RBP7.19□□□□□ -1.26
KIF3A-203ENST00000403231 MAGI3Q5TCQ9 1506 aa7.18□□□□□ -1.26
KIF3A-203ENST00000403231 UGGT2Q9NYU1 1516 aa7.18□□□□□ -1.26
KIF3A-203ENST00000403231 KIAA0556O60303 1618 aa7.18□□□□□ -1.26
KIF3A-203ENST00000403231 MTUS2Q5JR59 1369 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms