RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 MYCNP04198 464 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P20-201ENST00000402555 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
HMGB1P20-201ENST00000402555 CHD1O14646 1710 aa10.16□□□□□ -0.78
HMGB1P20-201ENST00000402555 WDR97A6NE52 1622 aa10.16□□□□□ -0.78
HMGB1P20-201ENST00000402555 FBLN2P98095 1184 aa10.16□□□□□ -0.78
HMGB1P20-201ENST00000402555 SYNJ1O43426 1573 aa10.16□□□□□ -0.78
HMGB1P20-201ENST00000402555 WRNQ14191 1432 aaPredicted RBP eCLIP10.16□□□□□ -0.78
HMGB1P20-201ENST00000402555 SNAPC4Q5SXM2 1469 aa10.15□□□□□ -0.78
HMGB1P20-201ENST00000402555 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
HMGB1P20-201ENST00000402555 TOP2BQ02880 1626 aa10.14□□□□□ -0.79
HMGB1P20-201ENST00000402555 BIVM-ERCC5R4GMW8 1640 aa10.14□□□□□ -0.79
HMGB1P20-201ENST00000402555 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
HMGB1P20-201ENST00000402555 GRIN2BQ13224 1484 aa10.12□□□□□ -0.79
HMGB1P20-201ENST00000402555 GAPVD1Q14C86 1478 aa10.11□□□□□ -0.79
HMGB1P20-201ENST00000402555 PBRM1Q86U86 1689 aa10.11□□□□□ -0.79
HMGB1P20-201ENST00000402555 ABCA5Q8WWZ7 1642 aa10.11□□□□□ -0.79
HMGB1P20-201ENST00000402555 FOXD4L1Q9NU39 408 aa10.1□□□□□ -0.79
HMGB1P20-201ENST00000402555 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P20-201ENST00000402555 RIMBP3CA6NJZ7 1639 aa10.09□□□□□ -0.79
HMGB1P20-201ENST00000402555 RIMBP3BA6NNM3 1639 aa10.09□□□□□ -0.79
HMGB1P20-201ENST00000402555 RIMBP3Q9UFD9 1639 aa10.09□□□□□ -0.79
HMGB1P20-201ENST00000402555 ABCB7O75027 752 aa10.09□□□□□ -0.79
HMGB1P20-201ENST00000402555 CHMP7Q8WUX9 453 aaPredicted RBP10.08□□□□□ -0.8
HMGB1P20-201ENST00000402555 ARHGEF11O15085 1522 aa10.07□□□□□ -0.8
HMGB1P20-201ENST00000402555 SYNJ2O15056 1496 aa10.06□□□□□ -0.8
HMGB1P20-201ENST00000402555 CLASP1Q7Z460 1538 aa10.03□□□□□ -0.8
HMGB1P20-201ENST00000402555 ADAMTS12P58397 1594 aa10.02□□□□□ -0.81
HMGB1P20-201ENST00000402555 CYB5RLQ6IPT4 315 aa10□□□□□ -0.81
HMGB1P20-201ENST00000402555 GRIN2AQ12879 1464 aa9.99□□□□□ -0.81
HMGB1P20-201ENST00000402555 ARAP1Q96P48 1450 aa9.99□□□□□ -0.81
HMGB1P20-201ENST00000402555 ERICH3Q5RHP9 1530 aa9.99□□□□□ -0.81
HMGB1P20-201ENST00000402555 ZBTB22O15209 634 aa9.99□□□□□ -0.81
HMGB1P20-201ENST00000402555 FHAD1B1AJZ9 1412 aa9.99□□□□□ -0.81
HMGB1P20-201ENST00000402555 CEP170Q5SW79 1584 aa9.97□□□□□ -0.81
HMGB1P20-201ENST00000402555 NUP160Q12769 1436 aa9.95□□□□□ -0.82
HMGB1P20-201ENST00000402555 KIF27Q86VH2 1401 aa9.94□□□□□ -0.82
HMGB1P20-201ENST00000402555 ATF5Q9Y2D1 282 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P20-201ENST00000402555 ERCC6L2Q5T890 1561 aa9.93□□□□□ -0.82
HMGB1P20-201ENST00000402555 POLA2Q14181 598 aa9.93□□□□□ -0.82
HMGB1P20-201ENST00000402555 IGF1RP08069 1367 aa9.92□□□□□ -0.82
HMGB1P20-201ENST00000402555 SHROOM2Q13796 1616 aa9.89□□□□□ -0.83
HMGB1P20-201ENST00000402555 CUL7Q14999 1698 aa9.88□□□□□ -0.83
HMGB1P20-201ENST00000402555 RUSC2Q8N2Y8 1516 aa9.87□□□□□ -0.83
HMGB1P20-201ENST00000402555 PRG4Q92954 1404 aaPredicted RBP9.86□□□□□ -0.83
HMGB1P20-201ENST00000402555 CARMIL1Q5VZK9 1371 aa9.86□□□□□ -0.83
HMGB1P20-201ENST00000402555 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
HMGB1P20-201ENST00000402555 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
HMGB1P20-201ENST00000402555 ATXN8OSP0DMR3 200 aa9.81□□□□□ -0.84
HMGB1P20-201ENST00000402555 RBM42Q9BTD8 480 aaKnown RBP9.81□□□□□ -0.84
HMGB1P20-201ENST00000402555 RAPGEF2Q9Y4G8 1499 aa9.79□□□□□ -0.84
HMGB1P20-201ENST00000402555 TTBK1Q5TCY1 1321 aaPredicted RBP9.77□□□□□ -0.85
HMGB1P20-201ENST00000402555 IQGAP2Q13576 1575 aa9.76□□□□□ -0.85
HMGB1P20-201ENST00000402555 ZBTB12Q9Y330 459 aaPredicted RBP9.76□□□□□ -0.85
HMGB1P20-201ENST00000402555 POTEHQ6S545 545 aa9.75□□□□□ -0.85
HMGB1P20-201ENST00000402555 PRXQ9BXM0 1461 aa9.72□□□□□ -0.85
HMGB1P20-201ENST00000402555 ADCY10Q96PN6 1610 aa9.72□□□□□ -0.85
HMGB1P20-201ENST00000402555 PTPRGP23470 1445 aa9.72□□□□□ -0.85
HMGB1P20-201ENST00000402555 CARMIL2Q6F5E8 1435 aa9.72□□□□□ -0.85
HMGB1P20-201ENST00000402555 DISP1Q96F81 1524 aa9.72□□□□□ -0.85
HMGB1P20-201ENST00000402555 FAM9AQ8IZU1 332 aaPredicted RBP9.71□□□□□ -0.86
HMGB1P20-201ENST00000402555 CTTNBP2Q8WZ74 1663 aa9.71□□□□□ -0.86
HMGB1P20-201ENST00000402555 CSRNP3Q8WYN3 585 aa9.7□□□□□ -0.86
HMGB1P20-201ENST00000402555 TNIKQ9UKE5 1360 aa9.7□□□□□ -0.86
HMGB1P20-201ENST00000402555 UGGT2Q9NYU1 1516 aa9.7□□□□□ -0.86
HMGB1P20-201ENST00000402555 KIAA0556O60303 1618 aa9.68□□□□□ -0.86
HMGB1P20-201ENST00000402555 NPM1P06748 294 aaKnown RBP eCLIP9.68□□□□□ -0.86
HMGB1P20-201ENST00000402555 KIF13AQ9H1H9 1805 aa9.67□□□□□ -0.86
HMGB1P20-201ENST00000402555 MAPKBP1O60336 1514 aa9.65□□□□□ -0.86
HMGB1P20-201ENST00000402555 EEA1Q15075 1411 aa9.65□□□□□ -0.87
HMGB1P20-201ENST00000402555 UACAQ9BZF9 1416 aa9.65□□□□□ -0.87
HMGB1P20-201ENST00000402555 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
HMGB1P20-201ENST00000402555 ABCC2Q92887 1545 aa9.64□□□□□ -0.87
HMGB1P20-201ENST00000402555 P3H3Q8IVL6 736 aa9.63□□□□□ -0.87
HMGB1P20-201ENST00000402555 EHMT2Q96KQ7 1210 aa9.63□□□□□ -0.87
HMGB1P20-201ENST00000402555 ABCC10Q5T3U5 1492 aa9.63□□□□□ -0.87
HMGB1P20-201ENST00000402555 DIP2BQ9P265 1576 aa9.63□□□□□ -0.87
HMGB1P20-201ENST00000402555 UHRF1BP1LA0JNW5 1464 aa9.62□□□□□ -0.87
HMGB1P20-201ENST00000402555 GOLGA3Q08378 1498 aa9.62□□□□□ -0.87
HMGB1P20-201ENST00000402555 PLB1Q6P1J6 1458 aa9.61□□□□□ -0.87
HMGB1P20-201ENST00000402555 RANGAP1P46060 587 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P20-201ENST00000402555 AKT1S1Q96B36 256 aa9.61□□□□□ -0.87
HMGB1P20-201ENST00000402555 ASXL2Q76L83 1435 aa9.6□□□□□ -0.87
HMGB1P20-201ENST00000402555 KDM5BQ9UGL1 1544 aa9.59□□□□□ -0.87
HMGB1P20-201ENST00000402555 KIF21BO75037 1637 aa9.59□□□□□ -0.87
HMGB1P20-201ENST00000402555 ZCCHC11Q5TAX3 1644 aaKnown RBP9.59□□□□□ -0.87
HMGB1P20-201ENST00000402555 TSPOAP1O95153 1857 aa9.58□□□□□ -0.88
HMGB1P20-201ENST00000402555 ABCA8O94911 1581 aa9.58□□□□□ -0.88
HMGB1P20-201ENST00000402555 SAMD9Q5K651 1589 aa9.58□□□□□ -0.88
HMGB1P20-201ENST00000402555 ARID3CA6NKF2 412 aa9.57□□□□□ -0.88
HMGB1P20-201ENST00000402555 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
HMGB1P20-201ENST00000402555 FHOD3Q2V2M9 1422 aa9.55□□□□□ -0.88
HMGB1P20-201ENST00000402555 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
HMGB1P20-201ENST00000402555 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
HMGB1P20-201ENST00000402555 GLI2P10070 1586 aa9.53□□□□□ -0.88
HMGB1P20-201ENST00000402555 WDR7Q9Y4E6 1490 aa9.52□□□□□ -0.89
HMGB1P20-201ENST00000402555 PPRC1Q5VV67 1664 aaKnown RBP9.51□□□□□ -0.89
HMGB1P20-201ENST00000402555 REM2Q8IYK8 340 aaPredicted RBP9.51□□□□□ -0.89
HMGB1P20-201ENST00000402555 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
HMGB1P20-201ENST00000402555 RAPGEF6Q8TEU7 1601 aa9.51□□□□□ -0.89
HMGB1P20-201ENST00000402555 ATP10BO94823 1461 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms