RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 DDX10Q13206 875 aaKnown RBP24.57■■□□□ 1.52
SNRNP70-202ENST00000401730 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
SNRNP70-202ENST00000401730 CLSPNQ9HAW4 1339 aa24.57■■□□□ 1.52
SNRNP70-202ENST00000401730 FHOD3Q2V2M9 1422 aa24.54■■□□□ 1.52
SNRNP70-202ENST00000401730 ARID3CA6NKF2 412 aa24.52■■□□□ 1.52
SNRNP70-202ENST00000401730 NESP48681 1621 aa24.48■■□□□ 1.51
SNRNP70-202ENST00000401730 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
SNRNP70-202ENST00000401730 BCANQ96GW7 911 aa24.46■■□□□ 1.51
SNRNP70-202ENST00000401730 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
SNRNP70-202ENST00000401730 SETD5Q9C0A6 1442 aa24.43■■□□□ 1.5
SNRNP70-202ENST00000401730 LRRC9Q6ZRR7 1453 aa24.41■■□□□ 1.5
SNRNP70-202ENST00000401730 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
SNRNP70-202ENST00000401730 SUPT16HQ9Y5B9 1047 aaKnown RBP24.39■■□□□ 1.5
SNRNP70-202ENST00000401730 TIAM1Q13009 1591 aa24.39■■□□□ 1.49
SNRNP70-202ENST00000401730 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
SNRNP70-202ENST00000401730 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
SNRNP70-202ENST00000401730 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
SNRNP70-202ENST00000401730 FHAD1B1AJZ9 1412 aa24.3■■□□□ 1.48
SNRNP70-202ENST00000401730 TRIM52Q96A61 297 aa24.29■■□□□ 1.48
SNRNP70-202ENST00000401730 PCF11O94913 1555 aaKnown RBP24.28■■□□□ 1.48
SNRNP70-202ENST00000401730 WDR97A6NE52 1622 aa24.27■■□□□ 1.48
SNRNP70-202ENST00000401730 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
SNRNP70-202ENST00000401730 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
SNRNP70-202ENST00000401730 RRP7BPQ9NSQ0 103 aa24.25■■□□□ 1.47
SNRNP70-202ENST00000401730 TOPBP1Q92547 1522 aa24.21■■□□□ 1.47
SNRNP70-202ENST00000401730 PPP1R15AO75807 674 aaPredicted RBP24.19■■□□□ 1.46
SNRNP70-202ENST00000401730 FKBP8Q14318 412 aa24.16■■□□□ 1.46
SNRNP70-202ENST00000401730 TONSLQ96HA7 1378 aa24.15■■□□□ 1.46
SNRNP70-202ENST00000401730 FOXD1Q16676 465 aa24.11■■□□□ 1.45
SNRNP70-202ENST00000401730 PTPRKQ15262 1439 aa24.1■■□□□ 1.45
SNRNP70-202ENST00000401730 ANP32CO43423 234 aa24.1■■□□□ 1.45
SNRNP70-202ENST00000401730 CNGB1Q14028 1251 aaPredicted RBP24.1■■□□□ 1.45
SNRNP70-202ENST00000401730 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
SNRNP70-202ENST00000401730 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
SNRNP70-202ENST00000401730 CASKIN1Q8WXD9 1431 aa24.08■■□□□ 1.45
SNRNP70-202ENST00000401730 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
SNRNP70-202ENST00000401730 FGD6Q6ZV73 1430 aa24.07■■□□□ 1.44
SNRNP70-202ENST00000401730 MAP3K1Q13233 1512 aa24.06■■□□□ 1.44
SNRNP70-202ENST00000401730 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
SNRNP70-202ENST00000401730 FYCO1Q9BQS8 1478 aa24.02■■□□□ 1.44
SNRNP70-202ENST00000401730 FMN1Q68DA7 1419 aa24.02■■□□□ 1.44
SNRNP70-202ENST00000401730 CCDC18Q5T9S5 1454 aa24■■□□□ 1.43
SNRNP70-202ENST00000401730 TSHZ2Q9NRE2 1034 aa23.99■■□□□ 1.43
SNRNP70-202ENST00000401730 GAPVD1Q14C86 1478 aa23.98■■□□□ 1.43
SNRNP70-202ENST00000401730 IRX6P78412 446 aaPredicted RBP23.96■■□□□ 1.43
SNRNP70-202ENST00000401730 CFAP43Q8NDM7 1665 aa23.96■■□□□ 1.43
SNRNP70-202ENST00000401730 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.436e-9■■■■■ 36.7
SNRNP70-202ENST00000401730 NCOA2Q15596 1464 aa23.95■■□□□ 1.42
SNRNP70-202ENST00000401730 NEFLP07196 543 aa23.91■■□□□ 1.42
SNRNP70-202ENST00000401730 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
SNRNP70-202ENST00000401730 EFCAB5A4FU69 1503 aa23.89■■□□□ 1.42
SNRNP70-202ENST00000401730 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
SNRNP70-202ENST00000401730 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.414e-9■■□□□ 13
SNRNP70-202ENST00000401730 ANP32EQ9BTT0 268 aa23.88■■□□□ 1.41
SNRNP70-202ENST00000401730 NAIPQ13075 1403 aa23.88■■□□□ 1.41
SNRNP70-202ENST00000401730 MYOM3Q5VTT5 1437 aa23.87■■□□□ 1.41
SNRNP70-202ENST00000401730 SENP3-EIF4A1A0A087X0R7 540 aa23.86■■□□□ 1.41
SNRNP70-202ENST00000401730 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
SNRNP70-202ENST00000401730 POLR3GLQ9BT43 218 aa23.86■■□□□ 1.41
SNRNP70-202ENST00000401730 ZNF644Q9H582 1327 aaPredicted RBP23.85■■□□□ 1.41
SNRNP70-202ENST00000401730 FBLN2P98095 1184 aa23.84■■□□□ 1.41
SNRNP70-202ENST00000401730 UACAQ9BZF9 1416 aa23.84■■□□□ 1.41
SNRNP70-202ENST00000401730 HFM1A2PYH4 1435 aa23.83■■□□□ 1.41
SNRNP70-202ENST00000401730 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
SNRNP70-202ENST00000401730 ZNF777Q9ULD5 760 aaPredicted RBP23.82■■□□□ 1.4
SNRNP70-202ENST00000401730 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
SNRNP70-202ENST00000401730 CUL7Q14999 1698 aa23.81■■□□□ 1.4
SNRNP70-202ENST00000401730 ZNF326Q5BKZ1 582 aaKnown RBP23.81■■□□□ 1.4
SNRNP70-202ENST00000401730 L3MBTL2Q969R5 705 aa23.8■■□□□ 1.4
SNRNP70-202ENST00000401730 MPHOSPH9Q99550 1183 aa23.8■■□□□ 1.4
SNRNP70-202ENST00000401730 CCDC184Q52MB2 194 aa23.78■■□□□ 1.4
SNRNP70-202ENST00000401730 BCL11AQ9H165 835 aa23.78■■□□□ 1.4
SNRNP70-202ENST00000401730 MAGI3Q5TCQ9 1506 aa23.78■■□□□ 1.4
SNRNP70-202ENST00000401730 CDK13Q14004 1512 aaKnown RBP23.77■■□□□ 1.4
SNRNP70-202ENST00000401730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.77■■□□□ 1.46e-8■□□□□ 11.1
SNRNP70-202ENST00000401730 CCER2I3L3R5 266 aa23.77■■□□□ 1.4
SNRNP70-202ENST00000401730 PTPN23Q9H3S7 1636 aa23.77■■□□□ 1.4
SNRNP70-202ENST00000401730 GRIN2BQ13224 1484 aa23.76■■□□□ 1.39
SNRNP70-202ENST00000401730 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
SNRNP70-202ENST00000401730 FAM9BQ8IZU0 186 aa23.76■■□□□ 1.39
SNRNP70-202ENST00000401730 C11orf95C9JLR9 678 aaPredicted RBP23.74■■□□□ 1.39
SNRNP70-202ENST00000401730 LRRIQ1Q96JM4 1722 aa23.74■■□□□ 1.39
SNRNP70-202ENST00000401730 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.393e-49■■□□□ 13.3
SNRNP70-202ENST00000401730 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.39
SNRNP70-202ENST00000401730 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
SNRNP70-202ENST00000401730 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
SNRNP70-202ENST00000401730 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
SNRNP70-202ENST00000401730 KDM6BO15054 1643 aa23.65■■□□□ 1.38
SNRNP70-202ENST00000401730 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
SNRNP70-202ENST00000401730 SUPT6HQ7KZ85 1726 aaKnown RBP23.65■■□□□ 1.38
SNRNP70-202ENST00000401730 SAMD9Q5K651 1589 aa23.65■■□□□ 1.38
SNRNP70-202ENST00000401730 EPRSP07814 1512 aaKnown RBP23.62■■□□□ 1.37
SNRNP70-202ENST00000401730 EHBP1L1Q8N3D4 1523 aa23.62■■□□□ 1.37
SNRNP70-202ENST00000401730 ZNF608Q9ULD9 1512 aaPredicted RBP23.61■■□□□ 1.37
SNRNP70-202ENST00000401730 UGGT2Q9NYU1 1516 aa23.61■■□□□ 1.37
SNRNP70-202ENST00000401730 MRS2Q9HD23 443 aa23.59■■□□□ 1.37
SNRNP70-202ENST00000401730 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.37
SNRNP70-202ENST00000401730 THOC2Q8NI27 1593 aaKnown RBP23.58■■□□□ 1.37
SNRNP70-202ENST00000401730 RBM19Q9Y4C8 960 aaKnown RBP23.57■■□□□ 1.36
SNRNP70-202ENST00000401730 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms