RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
LINC02408-201ENST00000400306 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
LINC02408-201ENST00000400306 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
LINC02408-201ENST00000400306 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
LINC02408-201ENST00000400306 BIVM-ERCC5R4GMW8 1640 aa13.27□□□□□ -0.28
LINC02408-201ENST00000400306 TOP2BQ02880 1626 aa13.26□□□□□ -0.29
LINC02408-201ENST00000400306 TARBP1Q13395 1621 aaKnown RBP13.25□□□□□ -0.29
LINC02408-201ENST00000400306 CLASP1Q7Z460 1538 aa13.25□□□□□ -0.29
LINC02408-201ENST00000400306 FBLN2P98095 1184 aa13.25□□□□□ -0.29
LINC02408-201ENST00000400306 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC02408-201ENST00000400306 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
LINC02408-201ENST00000400306 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
LINC02408-201ENST00000400306 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
LINC02408-201ENST00000400306 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
LINC02408-201ENST00000400306 RAD54L2Q9Y4B4 1467 aa13.17□□□□□ -0.3
LINC02408-201ENST00000400306 DSG3P32926 999 aa13.17□□□□□ -0.3
LINC02408-201ENST00000400306 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
LINC02408-201ENST00000400306 SOGA1O94964 1423 aa13.13□□□□□ -0.31
LINC02408-201ENST00000400306 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
LINC02408-201ENST00000400306 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
LINC02408-201ENST00000400306 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
LINC02408-201ENST00000400306 ZBTB22O15209 634 aa13.1□□□□□ -0.31
LINC02408-201ENST00000400306 ABCA10Q8WWZ4 1543 aa13.07□□□□□ -0.32
LINC02408-201ENST00000400306 MAGI1Q96QZ7 1491 aaPredicted RBP13.06□□□□□ -0.32
LINC02408-201ENST00000400306 RUSC2Q8N2Y8 1516 aa13.05□□□□□ -0.32
LINC02408-201ENST00000400306 TDRD9Q8NDG6 1382 aaKnown RBP13.05□□□□□ -0.32
LINC02408-201ENST00000400306 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
LINC02408-201ENST00000400306 CHMP7Q8WUX9 453 aaPredicted RBP13.04□□□□□ -0.32
LINC02408-201ENST00000400306 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
LINC02408-201ENST00000400306 ABCB7O75027 752 aa13.03□□□□□ -0.32
LINC02408-201ENST00000400306 SYNJ2O15056 1496 aa13.02□□□□□ -0.33
LINC02408-201ENST00000400306 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
LINC02408-201ENST00000400306 KIF27Q86VH2 1401 aa12.98□□□□□ -0.33
LINC02408-201ENST00000400306 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
LINC02408-201ENST00000400306 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
LINC02408-201ENST00000400306 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
LINC02408-201ENST00000400306 KDM6BO15054 1643 aa12.92□□□□□ -0.34
LINC02408-201ENST00000400306 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
LINC02408-201ENST00000400306 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
LINC02408-201ENST00000400306 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
LINC02408-201ENST00000400306 IGF1RP08069 1367 aa12.9□□□□□ -0.34
LINC02408-201ENST00000400306 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
LINC02408-201ENST00000400306 EEA1Q15075 1411 aa12.89□□□□□ -0.35
LINC02408-201ENST00000400306 ADAMTS12P58397 1594 aa12.89□□□□□ -0.35
LINC02408-201ENST00000400306 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
LINC02408-201ENST00000400306 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
LINC02408-201ENST00000400306 CUL7Q14999 1698 aa12.88□□□□□ -0.35
LINC02408-201ENST00000400306 CSRNP3Q8WYN3 585 aa12.87□□□□□ -0.35
LINC02408-201ENST00000400306 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
LINC02408-201ENST00000400306 POLA2Q14181 598 aa12.86□□□□□ -0.35
LINC02408-201ENST00000400306 DIP2BQ9P265 1576 aa12.85□□□□□ -0.35
LINC02408-201ENST00000400306 CARMIL1Q5VZK9 1371 aa12.84□□□□□ -0.35
LINC02408-201ENST00000400306 ABCC10Q5T3U5 1492 aa12.83□□□□□ -0.35
LINC02408-201ENST00000400306 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
LINC02408-201ENST00000400306 GRIN2AQ12879 1464 aa12.82□□□□□ -0.36
LINC02408-201ENST00000400306 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
LINC02408-201ENST00000400306 PRXQ9BXM0 1461 aa12.82□□□□□ -0.36
LINC02408-201ENST00000400306 KIF21BO75037 1637 aa12.81□□□□□ -0.36
LINC02408-201ENST00000400306 FAM69CQ0P6D2 419 aa12.81□□□□□ -0.36
LINC02408-201ENST00000400306 RAPGEF2Q9Y4G8 1499 aa12.8□□□□□ -0.36
LINC02408-201ENST00000400306 MAPKBP1O60336 1514 aa12.79□□□□□ -0.36
LINC02408-201ENST00000400306 NUP160Q12769 1436 aa12.78□□□□□ -0.36
LINC02408-201ENST00000400306 ADGRL1O94910 1474 aa12.76□□□□□ -0.37
LINC02408-201ENST00000400306 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
LINC02408-201ENST00000400306 GOLGA3Q08378 1498 aa12.75□□□□□ -0.37
LINC02408-201ENST00000400306 CTTNBP2Q8WZ74 1663 aa12.73□□□□□ -0.37
LINC02408-201ENST00000400306 ADCY10Q96PN6 1610 aa12.73□□□□□ -0.37
LINC02408-201ENST00000400306 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.38
LINC02408-201ENST00000400306 UBTFP17480 764 aaKnown RBP12.7□□□□□ -0.38
LINC02408-201ENST00000400306 PRG4Q92954 1404 aaPredicted RBP12.7□□□□□ -0.38
LINC02408-201ENST00000400306 FBXO41Q8TF61 875 aa12.69□□□□□ -0.38
LINC02408-201ENST00000400306 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
LINC02408-201ENST00000400306 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
LINC02408-201ENST00000400306 RANGAP1P46060 587 aaPredicted RBP12.66□□□□□ -0.38
LINC02408-201ENST00000400306 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
LINC02408-201ENST00000400306 KIAA0586Q9BVV6 1533 aa12.64□□□□□ -0.39
LINC02408-201ENST00000400306 TNIKQ9UKE5 1360 aa12.62□□□□□ -0.39
LINC02408-201ENST00000400306 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
LINC02408-201ENST00000400306 JPH4Q96JJ6 628 aa12.6□□□□□ -0.39
LINC02408-201ENST00000400306 LMTK3Q96Q04 1460 aa12.57□□□□□ -0.4
LINC02408-201ENST00000400306 UGGT2Q9NYU1 1516 aa12.56□□□□□ -0.4
LINC02408-201ENST00000400306 GLI2P10070 1586 aa12.56□□□□□ -0.4
LINC02408-201ENST00000400306 CEP162Q5TB80 1403 aa12.56□□□□□ -0.4
LINC02408-201ENST00000400306 P3H3Q8IVL6 736 aa12.55□□□□□ -0.4
LINC02408-201ENST00000400306 POTEHQ6S545 545 aa12.54□□□□□ -0.4
LINC02408-201ENST00000400306 KIAA0556O60303 1618 aa12.54□□□□□ -0.4
LINC02408-201ENST00000400306 SAMD9Q5K651 1589 aa12.54□□□□□ -0.4
LINC02408-201ENST00000400306 DISP1Q96F81 1524 aa12.53□□□□□ -0.4
LINC02408-201ENST00000400306 CLIP1P30622 1438 aa12.53□□□□□ -0.4
LINC02408-201ENST00000400306 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.4
LINC02408-201ENST00000400306 TTBK1Q5TCY1 1321 aaPredicted RBP12.52□□□□□ -0.41
LINC02408-201ENST00000400306 MAP3K4Q9Y6R4 1608 aa12.52□□□□□ -0.41
LINC02408-201ENST00000400306 FHOD3Q2V2M9 1422 aa12.51□□□□□ -0.41
LINC02408-201ENST00000400306 EFCAB5A4FU69 1503 aa12.5□□□□□ -0.41
LINC02408-201ENST00000400306 COL17A1Q9UMD9 1497 aaPredicted RBP12.49□□□□□ -0.41
LINC02408-201ENST00000400306 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
LINC02408-201ENST00000400306 PLB1Q6P1J6 1458 aa12.48□□□□□ -0.41
LINC02408-201ENST00000400306 ASXL2Q76L83 1435 aa12.46□□□□□ -0.41
LINC02408-201ENST00000400306 TEX14Q8IWB6 1497 aa12.46□□□□□ -0.41
LINC02408-201ENST00000400306 ABCC2Q92887 1545 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms