RNA–Protein interactions for RNA: ENST00000398983.2

AP004243.1-202, humanhuman

TSL 5 BASIC

Gene AP004243.1, Length 969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004243.1-202ENST00000398983 ATXN8OSP0DMR3 200 aa11.4□□□□□ -0.58
AP004243.1-202ENST00000398983 URB2Q14146 1524 aaKnown RBP11.4□□□□□ -0.59
AP004243.1-202ENST00000398983 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
AP004243.1-202ENST00000398983 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
AP004243.1-202ENST00000398983 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
AP004243.1-202ENST00000398983 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
AP004243.1-202ENST00000398983 ERICH3Q5RHP9 1530 aa11.37□□□□□ -0.59
AP004243.1-202ENST00000398983 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
AP004243.1-202ENST00000398983 TNIKQ9UKE5 1360 aa11.36□□□□□ -0.59
AP004243.1-202ENST00000398983 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
AP004243.1-202ENST00000398983 CUX2O14529 1486 aa11.34□□□□□ -0.59
AP004243.1-202ENST00000398983 WDR97A6NE52 1622 aa11.33□□□□□ -0.6
AP004243.1-202ENST00000398983 WDR62O43379 1518 aa11.33□□□□□ -0.6
AP004243.1-202ENST00000398983 DSG3P32926 999 aa11.32□□□□□ -0.6
AP004243.1-202ENST00000398983 ABCB7O75027 752 aa11.29□□□□□ -0.6
AP004243.1-202ENST00000398983 RAPGEF2Q9Y4G8 1499 aa11.29□□□□□ -0.6
AP004243.1-202ENST00000398983 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
AP004243.1-202ENST00000398983 ERCC6Q03468 1493 aa11.28□□□□□ -0.6
AP004243.1-202ENST00000398983 IGF1RP08069 1367 aa11.28□□□□□ -0.6
AP004243.1-202ENST00000398983 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.6
AP004243.1-202ENST00000398983 CEP162Q5TB80 1403 aa11.27□□□□□ -0.6
AP004243.1-202ENST00000398983 RAD54L2Q9Y4B4 1467 aa11.27□□□□□ -0.6
AP004243.1-202ENST00000398983 THOC2Q8NI27 1593 aaKnown RBP11.27□□□□□ -0.61
AP004243.1-202ENST00000398983 CUL7Q14999 1698 aa11.27□□□□□ -0.61
AP004243.1-202ENST00000398983 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
AP004243.1-202ENST00000398983 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
AP004243.1-202ENST00000398983 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
AP004243.1-202ENST00000398983 GAPVD1Q14C86 1478 aa11.21□□□□□ -0.61
AP004243.1-202ENST00000398983 POLA2Q14181 598 aa11.2□□□□□ -0.62
AP004243.1-202ENST00000398983 CLIP1P30622 1438 aa11.19□□□□□ -0.62
AP004243.1-202ENST00000398983 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
AP004243.1-202ENST00000398983 PBRM1Q86U86 1689 aa11.15□□□□□ -0.62
AP004243.1-202ENST00000398983 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
AP004243.1-202ENST00000398983 ADAMTS12P58397 1594 aa11.13□□□□□ -0.63
AP004243.1-202ENST00000398983 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
AP004243.1-202ENST00000398983 VPS8Q8N3P4 1428 aa11.12□□□□□ -0.63
AP004243.1-202ENST00000398983 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
AP004243.1-202ENST00000398983 CTTNBP2Q8WZ74 1663 aa11.1□□□□□ -0.63
AP004243.1-202ENST00000398983 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
AP004243.1-202ENST00000398983 AQRO60306 1485 aaKnown RBP eCLIP11.09□□□□□ -0.63
AP004243.1-202ENST00000398983 MAGI1Q96QZ7 1491 aaPredicted RBP11.09□□□□□ -0.63
AP004243.1-202ENST00000398983 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
AP004243.1-202ENST00000398983 ARAP1Q96P48 1450 aa11.07□□□□□ -0.64
AP004243.1-202ENST00000398983 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
AP004243.1-202ENST00000398983 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
AP004243.1-202ENST00000398983 SYNJ2O15056 1496 aa11.02□□□□□ -0.65
AP004243.1-202ENST00000398983 TRIM26Q12899 539 aaPredicted RBP11.02□□□□□ -0.65
AP004243.1-202ENST00000398983 GRIN2AQ12879 1464 aa11.01□□□□□ -0.65
AP004243.1-202ENST00000398983 SAMD9Q5K651 1589 aa11.01□□□□□ -0.65
AP004243.1-202ENST00000398983 IQGAP2Q13576 1575 aa10.99□□□□□ -0.65
AP004243.1-202ENST00000398983 MAP3K1Q13233 1512 aa10.99□□□□□ -0.65
AP004243.1-202ENST00000398983 KIAA0586Q9BVV6 1533 aa10.98□□□□□ -0.65
AP004243.1-202ENST00000398983 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
AP004243.1-202ENST00000398983 UGGT2Q9NYU1 1516 aa10.97□□□□□ -0.65
AP004243.1-202ENST00000398983 FMN1Q68DA7 1419 aa10.96□□□□□ -0.65
AP004243.1-202ENST00000398983 FYCO1Q9BQS8 1478 aa10.95□□□□□ -0.66
AP004243.1-202ENST00000398983 NUP160Q12769 1436 aa10.95□□□□□ -0.66
AP004243.1-202ENST00000398983 POTEHQ6S545 545 aa10.94□□□□□ -0.66
AP004243.1-202ENST00000398983 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
AP004243.1-202ENST00000398983 RANGAP1P46060 587 aaPredicted RBP10.93□□□□□ -0.66
AP004243.1-202ENST00000398983 PCGF6Q9BYE7 350 aa10.93□□□□□ -0.66
AP004243.1-202ENST00000398983 FHOD3Q2V2M9 1422 aa10.92□□□□□ -0.66
AP004243.1-202ENST00000398983 CASKIN1Q8WXD9 1431 aa10.92□□□□□ -0.66
AP004243.1-202ENST00000398983 PCF11O94913 1555 aaKnown RBP10.91□□□□□ -0.66
AP004243.1-202ENST00000398983 CEP170Q5SW79 1584 aa10.91□□□□□ -0.66
AP004243.1-202ENST00000398983 CFAP43Q8NDM7 1665 aa10.9□□□□□ -0.66
AP004243.1-202ENST00000398983 CHMP7Q8WUX9 453 aaPredicted RBP10.9□□□□□ -0.66
AP004243.1-202ENST00000398983 TIAM1Q13009 1591 aa10.9□□□□□ -0.67
AP004243.1-202ENST00000398983 KIAA0556O60303 1618 aa10.88□□□□□ -0.67
AP004243.1-202ENST00000398983 FBLN2P98095 1184 aa10.88□□□□□ -0.67
AP004243.1-202ENST00000398983 DISP1Q96F81 1524 aa10.86□□□□□ -0.67
AP004243.1-202ENST00000398983 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
AP004243.1-202ENST00000398983 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
AP004243.1-202ENST00000398983 HECW1Q76N89 1606 aa10.84□□□□□ -0.67
AP004243.1-202ENST00000398983 LRRC9Q6ZRR7 1453 aa10.84□□□□□ -0.67
AP004243.1-202ENST00000398983 CARMIL2Q6F5E8 1435 aa10.84□□□□□ -0.67
AP004243.1-202ENST00000398983 CHD1O14646 1710 aa10.83□□□□□ -0.68
AP004243.1-202ENST00000398983 PPARGC1BQ86YN6 1023 aaKnown RBP10.81□□□□□ -0.68
AP004243.1-202ENST00000398983 P3H3Q8IVL6 736 aa10.81□□□□□ -0.68
AP004243.1-202ENST00000398983 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
AP004243.1-202ENST00000398983 RRBP1Q9P2E9 1410 aaKnown RBP10.8□□□□□ -0.68
AP004243.1-202ENST00000398983 EHBP1L1Q8N3D4 1523 aa10.79□□□□□ -0.68
AP004243.1-202ENST00000398983 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
AP004243.1-202ENST00000398983 JPH4Q96JJ6 628 aa10.78□□□□□ -0.68
AP004243.1-202ENST00000398983 RAPGEF6Q8TEU7 1601 aa10.77□□□□□ -0.68
AP004243.1-202ENST00000398983 EPRSP07814 1512 aaKnown RBP10.77□□□□□ -0.69
AP004243.1-202ENST00000398983 CLASP1Q7Z460 1538 aa10.77□□□□□ -0.69
AP004243.1-202ENST00000398983 LRRIQ1Q96JM4 1722 aa10.76□□□□□ -0.69
AP004243.1-202ENST00000398983 MTUS2Q5JR59 1369 aa10.74□□□□□ -0.69
AP004243.1-202ENST00000398983 NUP153P49790 1475 aaKnown RBP10.74□□□□□ -0.69
AP004243.1-202ENST00000398983 TTBK1Q5TCY1 1321 aaPredicted RBP10.73□□□□□ -0.69
AP004243.1-202ENST00000398983 CCNB3Q8WWL7 1395 aa10.73□□□□□ -0.69
AP004243.1-202ENST00000398983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.73□□□□□ -0.69
AP004243.1-202ENST00000398983 PRG4Q92954 1404 aaPredicted RBP10.73□□□□□ -0.69
AP004243.1-202ENST00000398983 ABCA8O94911 1581 aa10.73□□□□□ -0.69
AP004243.1-202ENST00000398983 SUPT6HQ7KZ85 1726 aaKnown RBP10.72□□□□□ -0.69
AP004243.1-202ENST00000398983 ARHGEF11O15085 1522 aa10.72□□□□□ -0.69
AP004243.1-202ENST00000398983 HRCP23327 699 aa10.71□□□□□ -0.69
AP004243.1-202ENST00000398983 RBM42Q9BTD8 480 aaKnown RBP10.71□□□□□ -0.69
AP004243.1-202ENST00000398983 PHLDB1Q86UU1 1377 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms