RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 RAD54L2Q9Y4B4 1467 aa28.2■■■□□ 2.11
COL13A1-205ENST00000398978 HIRIP3Q9BW71 556 aaPredicted RBP28.2■■■□□ 2.11
COL13A1-205ENST00000398978 LRRC9Q6ZRR7 1453 aa28.2■■■□□ 2.1
COL13A1-205ENST00000398978 MAPKBP1O60336 1514 aa28.19■■■□□ 2.1
COL13A1-205ENST00000398978 FHOD3Q2V2M9 1422 aa28.18■■■□□ 2.1
COL13A1-205ENST00000398978 PRDM2Q13029 1718 aa28.17■■■□□ 2.1
COL13A1-205ENST00000398978 SETD5Q9C0A6 1442 aa28.16■■■□□ 2.1
COL13A1-205ENST00000398978 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
COL13A1-205ENST00000398978 DDX10Q13206 875 aaKnown RBP28.11■■■□□ 2.09
COL13A1-205ENST00000398978 SUPT16HQ9Y5B9 1047 aaKnown RBP28.1■■■□□ 2.09
COL13A1-205ENST00000398978 PCF11O94913 1555 aaKnown RBP28.09■■■□□ 2.09
COL13A1-205ENST00000398978 NESP48681 1621 aa28.07■■■□□ 2.08
COL13A1-205ENST00000398978 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
COL13A1-205ENST00000398978 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
COL13A1-205ENST00000398978 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
COL13A1-205ENST00000398978 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
COL13A1-205ENST00000398978 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
COL13A1-205ENST00000398978 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
COL13A1-205ENST00000398978 BCANQ96GW7 911 aa27.91■■■□□ 2.06
COL13A1-205ENST00000398978 CFAP43Q8NDM7 1665 aa27.9■■■□□ 2.06
COL13A1-205ENST00000398978 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
COL13A1-205ENST00000398978 ABCA10Q8WWZ4 1543 aa27.86■■■□□ 2.05
COL13A1-205ENST00000398978 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
COL13A1-205ENST00000398978 DNAJC5BQ9UF47 199 aa27.83■■■□□ 2.05
COL13A1-205ENST00000398978 CASKIN1Q8WXD9 1431 aa27.83■■■□□ 2.05
COL13A1-205ENST00000398978 PPP1R15AO75807 674 aaPredicted RBP27.82■■■□□ 2.04
COL13A1-205ENST00000398978 MTUS2Q5JR59 1369 aa27.81■■■□□ 2.04
COL13A1-205ENST00000398978 FYCO1Q9BQS8 1478 aa27.81■■■□□ 2.04
COL13A1-205ENST00000398978 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
COL13A1-205ENST00000398978 PTPRKQ15262 1439 aa27.77■■■□□ 2.04
COL13A1-205ENST00000398978 TRIM52Q96A61 297 aa27.77■■■□□ 2.04
COL13A1-205ENST00000398978 FGD6Q6ZV73 1430 aa27.76■■■□□ 2.03
COL13A1-205ENST00000398978 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
COL13A1-205ENST00000398978 TONSLQ96HA7 1378 aa27.71■■■□□ 2.03
COL13A1-205ENST00000398978 EFCAB5A4FU69 1503 aa27.71■■■□□ 2.03
COL13A1-205ENST00000398978 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
COL13A1-205ENST00000398978 FKBP8Q14318 412 aa27.7■■■□□ 2.03
COL13A1-205ENST00000398978 FMN1Q68DA7 1419 aa27.7■■■□□ 2.02
COL13A1-205ENST00000398978 CTTNBP2Q8WZ74 1663 aa27.69■■■□□ 2.02
COL13A1-205ENST00000398978 RRP7BPQ9NSQ0 103 aa27.69■■■□□ 2.02
COL13A1-205ENST00000398978 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
COL13A1-205ENST00000398978 SNAPC4Q5SXM2 1469 aa27.68■■■□□ 2.02
COL13A1-205ENST00000398978 TSHZ2Q9NRE2 1034 aa27.67■■■□□ 2.02
COL13A1-205ENST00000398978 CUL7Q14999 1698 aa27.65■■■□□ 2.02
COL13A1-205ENST00000398978 ANP32CO43423 234 aa27.64■■■□□ 2.02
COL13A1-205ENST00000398978 AQRO60306 1485 aaKnown RBP eCLIP27.64■■■□□ 2.02
COL13A1-205ENST00000398978 TIMELESSQ9UNS1 1208 aa27.61■■■□□ 2.01
COL13A1-205ENST00000398978 NCOA2Q15596 1464 aa27.61■■■□□ 2.01
COL13A1-205ENST00000398978 LRRIQ1Q96JM4 1722 aa27.6■■■□□ 2.01
COL13A1-205ENST00000398978 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
COL13A1-205ENST00000398978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.58■■■□□ 2.01
COL13A1-205ENST00000398978 HFM1A2PYH4 1435 aa27.55■■■□□ 2
COL13A1-205ENST00000398978 NAIPQ13075 1403 aa27.55■■■□□ 2
COL13A1-205ENST00000398978 MYOM3Q5VTT5 1437 aa27.53■■■□□ 2
COL13A1-205ENST00000398978 PTPN23Q9H3S7 1636 aa27.53■■■□□ 2
COL13A1-205ENST00000398978 UACAQ9BZF9 1416 aa27.53■■■□□ 2
COL13A1-205ENST00000398978 FOXD1Q16676 465 aa27.51■■□□□ 1.99
COL13A1-205ENST00000398978 GRIN2BQ13224 1484 aa27.5■■□□□ 1.99
COL13A1-205ENST00000398978 MAGI3Q5TCQ9 1506 aa27.47■■□□□ 1.99
COL13A1-205ENST00000398978 SAMD9Q5K651 1589 aa27.47■■□□□ 1.99
COL13A1-205ENST00000398978 ABCA5Q8WWZ7 1642 aa27.46■■□□□ 1.99
COL13A1-205ENST00000398978 CCER2I3L3R5 266 aa27.44■■□□□ 1.98
COL13A1-205ENST00000398978 MYT1Q01538 1121 aa27.44■■□□□ 1.98
COL13A1-205ENST00000398978 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
COL13A1-205ENST00000398978 NEFLP07196 543 aa27.41■■□□□ 1.98
COL13A1-205ENST00000398978 SUPT6HQ7KZ85 1726 aaKnown RBP27.4■■□□□ 1.98
COL13A1-205ENST00000398978 HSPA5P11021 654 aaKnown RBP27.38■■□□□ 1.97
COL13A1-205ENST00000398978 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
COL13A1-205ENST00000398978 KIF21AQ7Z4S6 1674 aa27.36■■□□□ 1.97
COL13A1-205ENST00000398978 IRX6P78412 446 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-205ENST00000398978 EHBP1L1Q8N3D4 1523 aa27.36■■□□□ 1.97
COL13A1-205ENST00000398978 CDK13Q14004 1512 aaKnown RBP27.35■■□□□ 1.97
COL13A1-205ENST00000398978 HNRNPUQ00839 825 aaKnown RBP eCLIP27.35■■□□□ 1.97
COL13A1-205ENST00000398978 KDM6BO15054 1643 aa27.34■■□□□ 1.97
COL13A1-205ENST00000398978 UGGT2Q9NYU1 1516 aa27.34■■□□□ 1.97
COL13A1-205ENST00000398978 WASHC2AQ641Q2 1341 aa27.33■■□□□ 1.97
COL13A1-205ENST00000398978 KDM5BQ9UGL1 1544 aa27.32■■□□□ 1.96
COL13A1-205ENST00000398978 DENND4BO75064 1496 aaPredicted RBP27.3■■□□□ 1.96
COL13A1-205ENST00000398978 MPHOSPH9Q99550 1183 aa27.3■■□□□ 1.96
COL13A1-205ENST00000398978 L3MBTL2Q969R5 705 aa27.28■■□□□ 1.96
COL13A1-205ENST00000398978 CCDC184Q52MB2 194 aa27.27■■□□□ 1.96
COL13A1-205ENST00000398978 ZNF644Q9H582 1327 aaPredicted RBP27.27■■□□□ 1.96
COL13A1-205ENST00000398978 EPRSP07814 1512 aaKnown RBP27.25■■□□□ 1.95
COL13A1-205ENST00000398978 CNGB1Q14028 1251 aaPredicted RBP27.25■■□□□ 1.95
COL13A1-205ENST00000398978 C11orf95C9JLR9 678 aaPredicted RBP27.24■■□□□ 1.95
COL13A1-205ENST00000398978 TARBP1Q13395 1621 aaKnown RBP27.24■■□□□ 1.95
COL13A1-205ENST00000398978 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
COL13A1-205ENST00000398978 EIF4G2P78344 907 aaKnown RBP eCLIP27.21■■□□□ 1.95
COL13A1-205ENST00000398978 THOC2Q8NI27 1593 aaKnown RBP27.21■■□□□ 1.95
COL13A1-205ENST00000398978 IQGAP2Q13576 1575 aa27.17■■□□□ 1.94
COL13A1-205ENST00000398978 HECW1Q76N89 1606 aa27.16■■□□□ 1.94
COL13A1-205ENST00000398978 NBPF8Q3BBV2 869 aa27.15■■□□□ 1.94
COL13A1-205ENST00000398978 TCOF1Q13428 1488 aaKnown RBP27.15■■□□□ 1.94
COL13A1-205ENST00000398978 FAM9BQ8IZU0 186 aa27.14■■□□□ 1.93
COL13A1-205ENST00000398978 RBM19Q9Y4C8 960 aaKnown RBP27.14■■□□□ 1.93
COL13A1-205ENST00000398978 PBRM1Q86U86 1689 aa27.13■■□□□ 1.93
COL13A1-205ENST00000398978 ZNF608Q9ULD9 1512 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-205ENST00000398978 SLC4A1APQ9BWU0 796 aaKnown RBP27.1■■□□□ 1.93
COL13A1-205ENST00000398978 GCC2Q8IWJ2 1684 aa27.1■■□□□ 1.93
COL13A1-205ENST00000398978 ANP32EQ9BTT0 268 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms