RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 BCANQ96GW7 911 aa31.44■■■□□ 2.62
NFIX-203ENST00000397661 PHLDB1Q86UU1 1377 aa31.44■■■□□ 2.62
NFIX-203ENST00000397661 DDX10Q13206 875 aaKnown RBP31.43■■■□□ 2.62
NFIX-203ENST00000397661 RAD54L2Q9Y4B4 1467 aa31.4■■■□□ 2.62
NFIX-203ENST00000397661 FHOD3Q2V2M9 1422 aa31.38■■■□□ 2.61
NFIX-203ENST00000397661 SUPT16HQ9Y5B9 1047 aaKnown RBP31.33■■■□□ 2.61
NFIX-203ENST00000397661 ARID3CA6NKF2 412 aa31.29■■■□□ 2.6
NFIX-203ENST00000397661 SETD5Q9C0A6 1442 aa31.28■■■□□ 2.6
NFIX-203ENST00000397661 NESP48681 1621 aa31.27■■■□□ 2.6
NFIX-203ENST00000397661 LRRC9Q6ZRR7 1453 aa31.25■■■□□ 2.59
NFIX-203ENST00000397661 FANCD2Q9BXW9 1451 aa31.25■■■□□ 2.59
NFIX-203ENST00000397661 TIAM1Q13009 1591 aa31.22■■■□□ 2.59
NFIX-203ENST00000397661 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
NFIX-203ENST00000397661 TDRD9Q8NDG6 1382 aaKnown RBP31.17■■■□□ 2.58
NFIX-203ENST00000397661 MAPKBP1O60336 1514 aa31.15■■■□□ 2.58
NFIX-203ENST00000397661 CC2D2AQ9P2K1 1620 aa31.15■■■□□ 2.58
NFIX-203ENST00000397661 FHAD1B1AJZ9 1412 aa31.12■■■□□ 2.57
NFIX-203ENST00000397661 CHIC2Q9UKJ5 165 aa31.09■■■□□ 2.57
NFIX-203ENST00000397661 PCF11O94913 1555 aaKnown RBP31.08■■■□□ 2.57
NFIX-203ENST00000397661 TRIM52Q96A61 297 aa31.07■■■□□ 2.56
NFIX-203ENST00000397661 WDR97A6NE52 1622 aa31.07■■■□□ 2.56
NFIX-203ENST00000397661 MTUS2Q5JR59 1369 aa31.05■■■□□ 2.56
NFIX-203ENST00000397661 TSHZ2Q9NRE2 1034 aa31.04■■■□□ 2.56
NFIX-203ENST00000397661 POLA1P09884 1462 aaPredicted RBP31.04■■■□□ 2.56
NFIX-203ENST00000397661 RRP7BPQ9NSQ0 103 aa31■■■□□ 2.55
NFIX-203ENST00000397661 TOPBP1Q92547 1522 aa30.97■■■□□ 2.55
NFIX-203ENST00000397661 PPP1R15AO75807 674 aaPredicted RBP30.96■■■□□ 2.55
NFIX-203ENST00000397661 FKBP8Q14318 412 aa30.93■■■□□ 2.54
NFIX-203ENST00000397661 TONSLQ96HA7 1378 aa30.91■■■□□ 2.54
NFIX-203ENST00000397661 PRDM2Q13029 1718 aa30.88■■■□□ 2.53
NFIX-203ENST00000397661 ANP32CO43423 234 aa30.87■■■□□ 2.53
NFIX-203ENST00000397661 MAP3K1Q13233 1512 aa30.85■■■□□ 2.53
NFIX-203ENST00000397661 ABCA10Q8WWZ4 1543 aa30.84■■■□□ 2.53
NFIX-203ENST00000397661 CASKIN1Q8WXD9 1431 aa30.83■■■□□ 2.53
NFIX-203ENST00000397661 PTPRKQ15262 1439 aa30.82■■■□□ 2.52
NFIX-203ENST00000397661 DNMBPQ6XZF7 1577 aa30.81■■■□□ 2.52
NFIX-203ENST00000397661 FGD6Q6ZV73 1430 aa30.81■■■□□ 2.52
NFIX-203ENST00000397661 FOXD1Q16676 465 aa30.8■■■□□ 2.52
NFIX-203ENST00000397661 FYCO1Q9BQS8 1478 aa30.77■■■□□ 2.52
NFIX-203ENST00000397661 CNGB1Q14028 1251 aaPredicted RBP30.77■■■□□ 2.52
NFIX-203ENST00000397661 FMN1Q68DA7 1419 aa30.76■■■□□ 2.51
NFIX-203ENST00000397661 ANP32EQ9BTT0 268 aa30.75■■■□□ 2.51
NFIX-203ENST00000397661 URB2Q14146 1524 aaKnown RBP30.74■■■□□ 2.51
NFIX-203ENST00000397661 CCDC18Q5T9S5 1454 aa30.73■■■□□ 2.51
NFIX-203ENST00000397661 CFAP43Q8NDM7 1665 aa30.69■■■□□ 2.5
NFIX-203ENST00000397661 GAPVD1Q14C86 1478 aa30.68■■■□□ 2.5
NFIX-203ENST00000397661 NCOA2Q15596 1464 aa30.64■■■□□ 2.5
NFIX-203ENST00000397661 NEFLP07196 543 aa30.64■■■□□ 2.5
NFIX-203ENST00000397661 IRX6P78412 446 aaPredicted RBP30.63■■■□□ 2.49
NFIX-203ENST00000397661 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.498e-7■■■■□ 22.8
NFIX-203ENST00000397661 TIMELESSQ9UNS1 1208 aa30.63■■■□□ 2.49
NFIX-203ENST00000397661 EFCAB5A4FU69 1503 aa30.61■■■□□ 2.49
NFIX-203ENST00000397661 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
NFIX-203ENST00000397661 HNRNPUQ00839 825 aaKnown RBP eCLIP30.56■■■□□ 2.48
NFIX-203ENST00000397661 NAIPQ13075 1403 aa30.56■■■□□ 2.48
NFIX-203ENST00000397661 MYOM3Q5VTT5 1437 aa30.55■■■□□ 2.48
NFIX-203ENST00000397661 HSPA5P11021 654 aaKnown RBP30.53■■■□□ 2.48
NFIX-203ENST00000397661 UACAQ9BZF9 1416 aa30.53■■■□□ 2.48
NFIX-203ENST00000397661 HFM1A2PYH4 1435 aa30.52■■■□□ 2.48
NFIX-203ENST00000397661 CUL7Q14999 1698 aa30.51■■■□□ 2.47
NFIX-203ENST00000397661 CTTNBP2Q8WZ74 1663 aa30.51■■■□□ 2.47
NFIX-203ENST00000397661 POLR3GLQ9BT43 218 aa30.49■■■□□ 2.47
NFIX-203ENST00000397661 PDS5BQ9NTI5 1447 aa30.48■■■□□ 2.47
NFIX-203ENST00000397661 ZNF644Q9H582 1327 aaPredicted RBP30.48■■■□□ 2.47
NFIX-203ENST00000397661 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.47■■■□□ 2.472e-9■■□□□ 11.5
NFIX-203ENST00000397661 CCER2I3L3R5 266 aa30.46■■■□□ 2.47
NFIX-203ENST00000397661 SENP3-EIF4A1A0A087X0R7 540 aa30.45■■■□□ 2.47
NFIX-203ENST00000397661 MPHOSPH9Q99550 1183 aa30.45■■■□□ 2.47
NFIX-203ENST00000397661 FBLN2P98095 1184 aa30.44■■■□□ 2.46
NFIX-203ENST00000397661 L3MBTL2Q969R5 705 aa30.44■■■□□ 2.46
NFIX-203ENST00000397661 PTPN23Q9H3S7 1636 aa30.43■■■□□ 2.46
NFIX-203ENST00000397661 ZNF777Q9ULD5 760 aaPredicted RBP30.43■■■□□ 2.46
NFIX-203ENST00000397661 ZNF326Q5BKZ1 582 aaKnown RBP30.43■■■□□ 2.46
NFIX-203ENST00000397661 GRIN2BQ13224 1484 aa30.42■■■□□ 2.46
NFIX-203ENST00000397661 RBM19Q9Y4C8 960 aaKnown RBP30.41■■■□□ 2.46
NFIX-203ENST00000397661 MAGI3Q5TCQ9 1506 aa30.41■■■□□ 2.46
NFIX-203ENST00000397661 CCDC184Q52MB2 194 aa30.4■■■□□ 2.46
NFIX-203ENST00000397661 WASHC2AQ641Q2 1341 aa30.4■■■□□ 2.46
NFIX-203ENST00000397661 CDK13Q14004 1512 aaKnown RBP30.4■■■□□ 2.46
NFIX-203ENST00000397661 FAM9BQ8IZU0 186 aa30.39■■■□□ 2.46
NFIX-203ENST00000397661 LRRIQ1Q96JM4 1722 aa30.38■■■□□ 2.45
NFIX-203ENST00000397661 BCL11AQ9H165 835 aa30.37■■■□□ 2.45
NFIX-203ENST00000397661 EIF4G2P78344 907 aaKnown RBP eCLIP30.36■■■□□ 2.451e-6■■■■□ 21.3
NFIX-203ENST00000397661 C11orf95C9JLR9 678 aaPredicted RBP30.35■■■□□ 2.45
NFIX-203ENST00000397661 LAMC3Q9Y6N6 1575 aa30.32■■■□□ 2.44
NFIX-203ENST00000397661 SLC4A1APQ9BWU0 796 aaKnown RBP30.32■■■□□ 2.44
NFIX-203ENST00000397661 ABCA5Q8WWZ7 1642 aa30.3■■■□□ 2.44
NFIX-203ENST00000397661 SUPT6HQ7KZ85 1726 aaKnown RBP30.29■■■□□ 2.44
NFIX-203ENST00000397661 SAMD9Q5K651 1589 aa30.28■■■□□ 2.44
NFIX-203ENST00000397661 NBPF8Q3BBV2 869 aa30.25■■■□□ 2.43
NFIX-203ENST00000397661 KDM6BO15054 1643 aa30.25■■■□□ 2.43
NFIX-203ENST00000397661 EHBP1L1Q8N3D4 1523 aa30.25■■■□□ 2.43
NFIX-203ENST00000397661 KIF21AQ7Z4S6 1674 aa30.25■■■□□ 2.43
NFIX-203ENST00000397661 EPRSP07814 1512 aaKnown RBP30.23■■■□□ 2.43
NFIX-203ENST00000397661 UGGT2Q9NYU1 1516 aa30.22■■■□□ 2.43
NFIX-203ENST00000397661 MRS2Q9HD23 443 aa30.19■■■□□ 2.42
NFIX-203ENST00000397661 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
NFIX-203ENST00000397661 DENND4BO75064 1496 aaPredicted RBP30.17■■■□□ 2.42
NFIX-203ENST00000397661 THOC2Q8NI27 1593 aaKnown RBP30.16■■■□□ 2.42
NFIX-203ENST00000397661 CFDP1Q9UEE9 299 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms