RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 DHX57Q6P158 1386 aaKnown RBP15.02□□□□□ -0.01
CPSF1P1-201ENST00000397477 TRIM52Q96A61 297 aa15.01□□□□□ -0.01
CPSF1P1-201ENST00000397477 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
CPSF1P1-201ENST00000397477 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
CPSF1P1-201ENST00000397477 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
CPSF1P1-201ENST00000397477 MTUS2Q5JR59 1369 aa14.97□□□□□ -0.01
CPSF1P1-201ENST00000397477 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
CPSF1P1-201ENST00000397477 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
CPSF1P1-201ENST00000397477 ERICH3Q5RHP9 1530 aa14.95□□□□□ -0.02
CPSF1P1-201ENST00000397477 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
CPSF1P1-201ENST00000397477 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
CPSF1P1-201ENST00000397477 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
CPSF1P1-201ENST00000397477 BCANQ96GW7 911 aa14.89□□□□□ -0.03
CPSF1P1-201ENST00000397477 FHAD1B1AJZ9 1412 aa14.88□□□□□ -0.03
CPSF1P1-201ENST00000397477 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
CPSF1P1-201ENST00000397477 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
CPSF1P1-201ENST00000397477 ZNF777Q9ULD5 760 aaPredicted RBP14.87□□□□□ -0.03
CPSF1P1-201ENST00000397477 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
CPSF1P1-201ENST00000397477 CLSPNQ9HAW4 1339 aa14.85□□□□□ -0.03
CPSF1P1-201ENST00000397477 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
CPSF1P1-201ENST00000397477 TONSLQ96HA7 1378 aa14.83□□□□□ -0.04
CPSF1P1-201ENST00000397477 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
CPSF1P1-201ENST00000397477 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
CPSF1P1-201ENST00000397477 MYT1Q01538 1121 aa14.8□□□□□ -0.04
CPSF1P1-201ENST00000397477 ZNF326Q5BKZ1 582 aaKnown RBP14.8□□□□□ -0.04
CPSF1P1-201ENST00000397477 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
CPSF1P1-201ENST00000397477 FOXD1Q16676 465 aa14.79□□□□□ -0.04
CPSF1P1-201ENST00000397477 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
CPSF1P1-201ENST00000397477 ANP32CO43423 234 aa14.77□□□□□ -0.05
CPSF1P1-201ENST00000397477 CHMP7Q8WUX9 453 aaPredicted RBP14.75□□□□□ -0.05
CPSF1P1-201ENST00000397477 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.05
CPSF1P1-201ENST00000397477 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
CPSF1P1-201ENST00000397477 FMN1Q68DA7 1419 aa14.72□□□□□ -0.05
CPSF1P1-201ENST00000397477 TIAM1Q13009 1591 aa14.72□□□□□ -0.05
CPSF1P1-201ENST00000397477 NEFLP07196 543 aa14.69□□□□□ -0.06
CPSF1P1-201ENST00000397477 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
CPSF1P1-201ENST00000397477 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
CPSF1P1-201ENST00000397477 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
CPSF1P1-201ENST00000397477 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
CPSF1P1-201ENST00000397477 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
CPSF1P1-201ENST00000397477 FKBP8Q14318 412 aa14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 FGD6Q6ZV73 1430 aa14.64□□□□□ -0.07
CPSF1P1-201ENST00000397477 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
CPSF1P1-201ENST00000397477 ZNF644Q9H582 1327 aaPredicted RBP14.63□□□□□ -0.07
CPSF1P1-201ENST00000397477 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
CPSF1P1-201ENST00000397477 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
CPSF1P1-201ENST00000397477 CFDP1Q9UEE9 299 aaPredicted RBP14.6□□□□□ -0.07
CPSF1P1-201ENST00000397477 HNRNPUQ00839 825 aaKnown RBP eCLIP14.59□□□□□ -0.07
CPSF1P1-201ENST00000397477 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
CPSF1P1-201ENST00000397477 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
CPSF1P1-201ENST00000397477 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
CPSF1P1-201ENST00000397477 CCDC18Q5T9S5 1454 aa14.58□□□□□ -0.08
CPSF1P1-201ENST00000397477 MPHOSPH9Q99550 1183 aa14.57□□□□□ -0.08
CPSF1P1-201ENST00000397477 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
CPSF1P1-201ENST00000397477 FAM9BQ8IZU0 186 aa14.56□□□□□ -0.08
CPSF1P1-201ENST00000397477 KDM2AQ9Y2K7 1162 aa14.56□□□□□ -0.08
CPSF1P1-201ENST00000397477 HSPA5P11021 654 aaKnown RBP14.55□□□□□ -0.08
CPSF1P1-201ENST00000397477 EIF4G2P78344 907 aaKnown RBP eCLIP14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 PTPRKQ15262 1439 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
CPSF1P1-201ENST00000397477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
CPSF1P1-201ENST00000397477 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.09
CPSF1P1-201ENST00000397477 EFCAB5A4FU69 1503 aa14.51□□□□□ -0.09
CPSF1P1-201ENST00000397477 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
CPSF1P1-201ENST00000397477 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
CPSF1P1-201ENST00000397477 ZNF608Q9ULD9 1512 aaPredicted RBP14.5□□□□□ -0.09
CPSF1P1-201ENST00000397477 CDK13Q14004 1512 aaKnown RBP14.5□□□□□ -0.09
CPSF1P1-201ENST00000397477 JPH4Q96JJ6 628 aa14.49□□□□□ -0.09
CPSF1P1-201ENST00000397477 MAP3K1Q13233 1512 aa14.48□□□□□ -0.09
CPSF1P1-201ENST00000397477 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
CPSF1P1-201ENST00000397477 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
CPSF1P1-201ENST00000397477 NAIPQ13075 1403 aa14.46□□□□□ -0.09
CPSF1P1-201ENST00000397477 PRDM2Q13029 1718 aa14.46□□□□□ -0.1
CPSF1P1-201ENST00000397477 UACAQ9BZF9 1416 aa14.46□□□□□ -0.1
CPSF1P1-201ENST00000397477 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
CPSF1P1-201ENST00000397477 CUL7Q14999 1698 aa14.45□□□□□ -0.1
CPSF1P1-201ENST00000397477 RGL3Q3MIN7 710 aa14.44□□□□□ -0.1
CPSF1P1-201ENST00000397477 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
CPSF1P1-201ENST00000397477 PKD2Q13563 968 aa14.43□□□□□ -0.1
CPSF1P1-201ENST00000397477 HFM1A2PYH4 1435 aa14.43□□□□□ -0.1
CPSF1P1-201ENST00000397477 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
CPSF1P1-201ENST00000397477 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
CPSF1P1-201ENST00000397477 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
CPSF1P1-201ENST00000397477 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
CPSF1P1-201ENST00000397477 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
CPSF1P1-201ENST00000397477 EPRSP07814 1512 aaKnown RBP14.4□□□□□ -0.1
CPSF1P1-201ENST00000397477 PRG4Q92954 1404 aaPredicted RBP14.39□□□□□ -0.11
CPSF1P1-201ENST00000397477 WASHC2AQ641Q2 1341 aa14.37□□□□□ -0.11
CPSF1P1-201ENST00000397477 CCER2I3L3R5 266 aa14.37□□□□□ -0.11
CPSF1P1-201ENST00000397477 NBPF8Q3BBV2 869 aa14.37□□□□□ -0.11
CPSF1P1-201ENST00000397477 CFAP43Q8NDM7 1665 aa14.36□□□□□ -0.11
CPSF1P1-201ENST00000397477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.36□□□□□ -0.11
CPSF1P1-201ENST00000397477 EHBP1L1Q8N3D4 1523 aa14.35□□□□□ -0.11
CPSF1P1-201ENST00000397477 CTTNBP2Q8WZ74 1663 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms