RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 DHX57Q6P158 1386 aaKnown RBP15.02□□□□□ -0.01
CPSF1P1-201ENST00000397477 TRIM52Q96A61 297 aa15.01□□□□□ -0.01
CPSF1P1-201ENST00000397477 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
CPSF1P1-201ENST00000397477 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
CPSF1P1-201ENST00000397477 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
CPSF1P1-201ENST00000397477 MTUS2Q5JR59 1369 aa14.97□□□□□ -0.01
CPSF1P1-201ENST00000397477 RAB3GAP2Q9H2M9 1393 aa14.97□□□□□ -0.01
CPSF1P1-201ENST00000397477 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
CPSF1P1-201ENST00000397477 ERICH3Q5RHP9 1530 aa14.95□□□□□ -0.02
CPSF1P1-201ENST00000397477 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
CPSF1P1-201ENST00000397477 BIVM-ERCC5R4GMW8 1640 aa14.92□□□□□ -0.02
CPSF1P1-201ENST00000397477 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
CPSF1P1-201ENST00000397477 BCANQ96GW7 911 aa14.89□□□□□ -0.03
CPSF1P1-201ENST00000397477 FHAD1B1AJZ9 1412 aa14.88□□□□□ -0.03
CPSF1P1-201ENST00000397477 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
CPSF1P1-201ENST00000397477 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
CPSF1P1-201ENST00000397477 ZNF777Q9ULD5 760 aaPredicted RBP14.87□□□□□ -0.03
CPSF1P1-201ENST00000397477 SETD5Q9C0A6 1442 aa14.86□□□□□ -0.03
CPSF1P1-201ENST00000397477 CLSPNQ9HAW4 1339 aa14.85□□□□□ -0.03
CPSF1P1-201ENST00000397477 POLA1P09884 1462 aaPredicted RBP14.84□□□□□ -0.03
CPSF1P1-201ENST00000397477 TONSLQ96HA7 1378 aa14.83□□□□□ -0.04
CPSF1P1-201ENST00000397477 RRBP1Q9P2E9 1410 aaKnown RBP14.82□□□□□ -0.04
CPSF1P1-201ENST00000397477 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
CPSF1P1-201ENST00000397477 MYT1Q01538 1121 aa14.8□□□□□ -0.04
CPSF1P1-201ENST00000397477 ZNF326Q5BKZ1 582 aaKnown RBP14.8□□□□□ -0.04
CPSF1P1-201ENST00000397477 LRRC9Q6ZRR7 1453 aa14.8□□□□□ -0.04
CPSF1P1-201ENST00000397477 FOXD1Q16676 465 aa14.79□□□□□ -0.04
CPSF1P1-201ENST00000397477 PDS5BQ9NTI5 1447 aa14.79□□□□□ -0.04
CPSF1P1-201ENST00000397477 ANP32CO43423 234 aa14.77□□□□□ -0.05
CPSF1P1-201ENST00000397477 CHMP7Q8WUX9 453 aaPredicted RBP14.75□□□□□ -0.05
CPSF1P1-201ENST00000397477 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.05
CPSF1P1-201ENST00000397477 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
CPSF1P1-201ENST00000397477 FMN1Q68DA7 1419 aa14.72□□□□□ -0.05
CPSF1P1-201ENST00000397477 TIAM1Q13009 1591 aa14.72□□□□□ -0.05
CPSF1P1-201ENST00000397477 NEFLP07196 543 aa14.69□□□□□ -0.06
CPSF1P1-201ENST00000397477 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
CPSF1P1-201ENST00000397477 URB2Q14146 1524 aaKnown RBP14.69□□□□□ -0.06
CPSF1P1-201ENST00000397477 PPP1R15AO75807 674 aaPredicted RBP14.68□□□□□ -0.06
CPSF1P1-201ENST00000397477 PCF11O94913 1555 aaKnown RBP14.68□□□□□ -0.06
CPSF1P1-201ENST00000397477 ABCA10Q8WWZ4 1543 aa14.67□□□□□ -0.06
CPSF1P1-201ENST00000397477 FKBP8Q14318 412 aa14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
CPSF1P1-201ENST00000397477 FGD6Q6ZV73 1430 aa14.64□□□□□ -0.07
CPSF1P1-201ENST00000397477 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
CPSF1P1-201ENST00000397477 ZNF644Q9H582 1327 aaPredicted RBP14.63□□□□□ -0.07
CPSF1P1-201ENST00000397477 ERCC6Q03468 1493 aa14.61□□□□□ -0.07
CPSF1P1-201ENST00000397477 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
CPSF1P1-201ENST00000397477 CFDP1Q9UEE9 299 aaPredicted RBP14.6□□□□□ -0.07
CPSF1P1-201ENST00000397477 HNRNPUQ00839 825 aaKnown RBP eCLIP14.59□□□□□ -0.07
CPSF1P1-201ENST00000397477 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
CPSF1P1-201ENST00000397477 IRX6P78412 446 aaPredicted RBP14.58□□□□□ -0.08
CPSF1P1-201ENST00000397477 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
CPSF1P1-201ENST00000397477 CCDC18Q5T9S5 1454 aa14.58□□□□□ -0.08
CPSF1P1-201ENST00000397477 MPHOSPH9Q99550 1183 aa14.57□□□□□ -0.08
CPSF1P1-201ENST00000397477 WDR97A6NE52 1622 aa14.57□□□□□ -0.08
CPSF1P1-201ENST00000397477 FAM9BQ8IZU0 186 aa14.56□□□□□ -0.08
CPSF1P1-201ENST00000397477 KDM2AQ9Y2K7 1162 aa14.56□□□□□ -0.08
CPSF1P1-201ENST00000397477 HSPA5P11021 654 aaKnown RBP14.55□□□□□ -0.08
CPSF1P1-201ENST00000397477 EIF4G2P78344 907 aaKnown RBP eCLIP14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 PTPRKQ15262 1439 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
CPSF1P1-201ENST00000397477 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
CPSF1P1-201ENST00000397477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
CPSF1P1-201ENST00000397477 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.09
CPSF1P1-201ENST00000397477 EFCAB5A4FU69 1503 aa14.51□□□□□ -0.09
CPSF1P1-201ENST00000397477 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
CPSF1P1-201ENST00000397477 LAMC3Q9Y6N6 1575 aa14.51□□□□□ -0.09
CPSF1P1-201ENST00000397477 ZNF608Q9ULD9 1512 aaPredicted RBP14.5□□□□□ -0.09
CPSF1P1-201ENST00000397477 CDK13Q14004 1512 aaKnown RBP14.5□□□□□ -0.09
CPSF1P1-201ENST00000397477 JPH4Q96JJ6 628 aa14.49□□□□□ -0.09
CPSF1P1-201ENST00000397477 MAP3K1Q13233 1512 aa14.48□□□□□ -0.09
CPSF1P1-201ENST00000397477 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
CPSF1P1-201ENST00000397477 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
CPSF1P1-201ENST00000397477 NAIPQ13075 1403 aa14.46□□□□□ -0.09
CPSF1P1-201ENST00000397477 PRDM2Q13029 1718 aa14.46□□□□□ -0.1
CPSF1P1-201ENST00000397477 UACAQ9BZF9 1416 aa14.46□□□□□ -0.1
CPSF1P1-201ENST00000397477 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
CPSF1P1-201ENST00000397477 CUL7Q14999 1698 aa14.45□□□□□ -0.1
CPSF1P1-201ENST00000397477 RGL3Q3MIN7 710 aa14.44□□□□□ -0.1
CPSF1P1-201ENST00000397477 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
CPSF1P1-201ENST00000397477 PKD2Q13563 968 aa14.43□□□□□ -0.1
CPSF1P1-201ENST00000397477 HFM1A2PYH4 1435 aa14.43□□□□□ -0.1
CPSF1P1-201ENST00000397477 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
CPSF1P1-201ENST00000397477 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
CPSF1P1-201ENST00000397477 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
CPSF1P1-201ENST00000397477 SALL2Q9Y467 1007 aaPredicted RBP14.4□□□□□ -0.1
CPSF1P1-201ENST00000397477 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
CPSF1P1-201ENST00000397477 EPRSP07814 1512 aaKnown RBP14.4□□□□□ -0.1
CPSF1P1-201ENST00000397477 PRG4Q92954 1404 aaPredicted RBP14.39□□□□□ -0.11
CPSF1P1-201ENST00000397477 WASHC2AQ641Q2 1341 aa14.37□□□□□ -0.11
CPSF1P1-201ENST00000397477 CCER2I3L3R5 266 aa14.37□□□□□ -0.11
CPSF1P1-201ENST00000397477 NBPF8Q3BBV2 869 aa14.37□□□□□ -0.11
CPSF1P1-201ENST00000397477 CFAP43Q8NDM7 1665 aa14.36□□□□□ -0.11
CPSF1P1-201ENST00000397477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.36□□□□□ -0.11
CPSF1P1-201ENST00000397477 EHBP1L1Q8N3D4 1523 aa14.35□□□□□ -0.11
CPSF1P1-201ENST00000397477 CTTNBP2Q8WZ74 1663 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms