RNA–Protein interactions for RNA: ENST00000397349.6

SMIM7-202, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,122 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-202ENST00000397349 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
SMIM7-202ENST00000397349 GAPVD1Q14C86 1478 aa14.16□□□□□ -0.14
SMIM7-202ENST00000397349 CUL7Q14999 1698 aa14.16□□□□□ -0.14
SMIM7-202ENST00000397349 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
SMIM7-202ENST00000397349 AQRO60306 1485 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMIM7-202ENST00000397349 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
SMIM7-202ENST00000397349 KIF21BO75037 1637 aa14.12□□□□□ -0.15
SMIM7-202ENST00000397349 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
SMIM7-202ENST00000397349 ADAMTS12P58397 1594 aa14.09□□□□□ -0.15
SMIM7-202ENST00000397349 CHD1O14646 1710 aa14.08□□□□□ -0.16
SMIM7-202ENST00000397349 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
SMIM7-202ENST00000397349 CTTNBP2Q8WZ74 1663 aa14.06□□□□□ -0.16
SMIM7-202ENST00000397349 SNAPC4Q5SXM2 1469 aa14.06□□□□□ -0.16
SMIM7-202ENST00000397349 IGF1RP08069 1367 aa14.05□□□□□ -0.16
SMIM7-202ENST00000397349 ZBTB22O15209 634 aa14.04□□□□□ -0.16
SMIM7-202ENST00000397349 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
SMIM7-202ENST00000397349 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
SMIM7-202ENST00000397349 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.16
SMIM7-202ENST00000397349 SPINK5Q9NQ38 1064 aaPredicted RBP14.02□□□□□ -0.17
SMIM7-202ENST00000397349 GOLGA3Q08378 1498 aa14.01□□□□□ -0.17
SMIM7-202ENST00000397349 PRXQ9BXM0 1461 aa14.01□□□□□ -0.17
SMIM7-202ENST00000397349 CARMIL1Q5VZK9 1371 aa14.01□□□□□ -0.17
SMIM7-202ENST00000397349 CAPN15O75808 1086 aa14.01□□□□□ -0.17
SMIM7-202ENST00000397349 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
SMIM7-202ENST00000397349 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
SMIM7-202ENST00000397349 LOC105371045A0A1W2PR82 267 aa13.96□□□□□ -0.17
SMIM7-202ENST00000397349 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
SMIM7-202ENST00000397349 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
SMIM7-202ENST00000397349 UBTFP17480 764 aaKnown RBP13.9□□□□□ -0.18
SMIM7-202ENST00000397349 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
SMIM7-202ENST00000397349 FBLN2P98095 1184 aa13.89□□□□□ -0.19
SMIM7-202ENST00000397349 CHMP7Q8WUX9 453 aaPredicted RBP13.89□□□□□ -0.19
SMIM7-202ENST00000397349 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
SMIM7-202ENST00000397349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.86□□□□□ -0.19
SMIM7-202ENST00000397349 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
SMIM7-202ENST00000397349 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
SMIM7-202ENST00000397349 TNIKQ9UKE5 1360 aa13.85□□□□□ -0.19
SMIM7-202ENST00000397349 IQGAP2Q13576 1575 aa13.84□□□□□ -0.19
SMIM7-202ENST00000397349 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
SMIM7-202ENST00000397349 NUP160Q12769 1436 aa13.81□□□□□ -0.2
SMIM7-202ENST00000397349 APLP2Q06481 763 aa13.8□□□□□ -0.2
SMIM7-202ENST00000397349 DSG3P32926 999 aa13.79□□□□□ -0.2
SMIM7-202ENST00000397349 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
SMIM7-202ENST00000397349 CEP162Q5TB80 1403 aa13.78□□□□□ -0.2
SMIM7-202ENST00000397349 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
SMIM7-202ENST00000397349 KIAA0586Q9BVV6 1533 aa13.78□□□□□ -0.2
SMIM7-202ENST00000397349 SAMD9Q5K651 1589 aa13.76□□□□□ -0.21
SMIM7-202ENST00000397349 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
SMIM7-202ENST00000397349 EFCAB5A4FU69 1503 aa13.74□□□□□ -0.21
SMIM7-202ENST00000397349 CLIP1P30622 1438 aa13.73□□□□□ -0.21
SMIM7-202ENST00000397349 ABCB7O75027 752 aa13.73□□□□□ -0.21
SMIM7-202ENST00000397349 UGGT2Q9NYU1 1516 aa13.73□□□□□ -0.21
SMIM7-202ENST00000397349 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
SMIM7-202ENST00000397349 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
SMIM7-202ENST00000397349 ARHGAP35Q9NRY4 1499 aa13.7□□□□□ -0.22
SMIM7-202ENST00000397349 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
SMIM7-202ENST00000397349 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
SMIM7-202ENST00000397349 DISP1Q96F81 1524 aa13.65□□□□□ -0.22
SMIM7-202ENST00000397349 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
SMIM7-202ENST00000397349 JPH4Q96JJ6 628 aa13.65□□□□□ -0.22
SMIM7-202ENST00000397349 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
SMIM7-202ENST00000397349 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
SMIM7-202ENST00000397349 CARMIL2Q6F5E8 1435 aa13.63□□□□□ -0.23
SMIM7-202ENST00000397349 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
SMIM7-202ENST00000397349 LRRIQ1Q96JM4 1722 aa13.62□□□□□ -0.23
SMIM7-202ENST00000397349 PCF11O94913 1555 aaKnown RBP13.61□□□□□ -0.23
SMIM7-202ENST00000397349 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
SMIM7-202ENST00000397349 RAPGEF6Q8TEU7 1601 aa13.58□□□□□ -0.24
SMIM7-202ENST00000397349 RIMBP3CA6NJZ7 1639 aa13.57□□□□□ -0.24
SMIM7-202ENST00000397349 RIMBP3BA6NNM3 1639 aa13.57□□□□□ -0.24
SMIM7-202ENST00000397349 RIMBP3Q9UFD9 1639 aa13.57□□□□□ -0.24
SMIM7-202ENST00000397349 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
SMIM7-202ENST00000397349 FMN1Q68DA7 1419 aa13.56□□□□□ -0.24
SMIM7-202ENST00000397349 HECW1Q76N89 1606 aa13.55□□□□□ -0.24
SMIM7-202ENST00000397349 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
SMIM7-202ENST00000397349 CFAP43Q8NDM7 1665 aa13.55□□□□□ -0.24
SMIM7-202ENST00000397349 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
SMIM7-202ENST00000397349 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
SMIM7-202ENST00000397349 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
SMIM7-202ENST00000397349 ABCA8O94911 1581 aa13.51□□□□□ -0.25
SMIM7-202ENST00000397349 POLA2Q14181 598 aa13.5□□□□□ -0.25
SMIM7-202ENST00000397349 PTPRGP23470 1445 aa13.49□□□□□ -0.25
SMIM7-202ENST00000397349 CASKIN1Q8WXD9 1431 aa13.49□□□□□ -0.25
SMIM7-202ENST00000397349 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
SMIM7-202ENST00000397349 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
SMIM7-202ENST00000397349 TIAM1Q13009 1591 aa13.47□□□□□ -0.25
SMIM7-202ENST00000397349 ADCY10Q96PN6 1610 aa13.46□□□□□ -0.25
SMIM7-202ENST00000397349 ZCCHC11Q5TAX3 1644 aaKnown RBP13.46□□□□□ -0.26
SMIM7-202ENST00000397349 ABCC2Q92887 1545 aa13.44□□□□□ -0.26
SMIM7-202ENST00000397349 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
SMIM7-202ENST00000397349 UACAQ9BZF9 1416 aa13.43□□□□□ -0.26
SMIM7-202ENST00000397349 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
SMIM7-202ENST00000397349 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
SMIM7-202ENST00000397349 EPRSP07814 1512 aaKnown RBP13.42□□□□□ -0.26
SMIM7-202ENST00000397349 MAP3K1Q13233 1512 aa13.41□□□□□ -0.26
SMIM7-202ENST00000397349 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
SMIM7-202ENST00000397349 ARID3CA6NKF2 412 aa13.39□□□□□ -0.27
SMIM7-202ENST00000397349 SUPT6HQ7KZ85 1726 aaKnown RBP13.39□□□□□ -0.27
SMIM7-202ENST00000397349 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
SMIM7-202ENST00000397349 EHBP1L1Q8N3D4 1523 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms