RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 DDX10Q13206 875 aaKnown RBP22.83■■□□□ 1.25
ATP2A3-206ENST00000397043 FHOD3Q2V2M9 1422 aa22.79■■□□□ 1.24
ATP2A3-206ENST00000397043 SETD5Q9C0A6 1442 aa22.78■■□□□ 1.24
ATP2A3-206ENST00000397043 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
ATP2A3-206ENST00000397043 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
ATP2A3-206ENST00000397043 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
ATP2A3-206ENST00000397043 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
ATP2A3-206ENST00000397043 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
ATP2A3-206ENST00000397043 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
ATP2A3-206ENST00000397043 BCANQ96GW7 911 aa22.69■■□□□ 1.22
ATP2A3-206ENST00000397043 NESP48681 1621 aa22.66■■□□□ 1.22
ATP2A3-206ENST00000397043 ARID3CA6NKF2 412 aa22.64■■□□□ 1.21
ATP2A3-206ENST00000397043 MAPKBP1O60336 1514 aa22.64■■□□□ 1.21
ATP2A3-206ENST00000397043 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.21
ATP2A3-206ENST00000397043 MTUS2Q5JR59 1369 aa22.62■■□□□ 1.21
ATP2A3-206ENST00000397043 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
ATP2A3-206ENST00000397043 PCF11O94913 1555 aaKnown RBP22.61■■□□□ 1.21
ATP2A3-206ENST00000397043 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
ATP2A3-206ENST00000397043 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
ATP2A3-206ENST00000397043 TRIM52Q96A61 297 aa22.56■■□□□ 1.2
ATP2A3-206ENST00000397043 CHIC2Q9UKJ5 165 aa22.56■■□□□ 1.2
ATP2A3-206ENST00000397043 TONSLQ96HA7 1378 aa22.54■■□□□ 1.2
ATP2A3-206ENST00000397043 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
ATP2A3-206ENST00000397043 MAP3K1Q13233 1512 aa22.53■■□□□ 1.2
ATP2A3-206ENST00000397043 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
ATP2A3-206ENST00000397043 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
ATP2A3-206ENST00000397043 ANP32CO43423 234 aa22.51■■□□□ 1.19
ATP2A3-206ENST00000397043 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
ATP2A3-206ENST00000397043 FKBP8Q14318 412 aa22.49■■□□□ 1.19
ATP2A3-206ENST00000397043 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
ATP2A3-206ENST00000397043 CASKIN1Q8WXD9 1431 aa22.47■■□□□ 1.19
ATP2A3-206ENST00000397043 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
ATP2A3-206ENST00000397043 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
ATP2A3-206ENST00000397043 FMN1Q68DA7 1419 aa22.45■■□□□ 1.18
ATP2A3-206ENST00000397043 FYCO1Q9BQS8 1478 aa22.45■■□□□ 1.18
ATP2A3-206ENST00000397043 FGD6Q6ZV73 1430 aa22.43■■□□□ 1.18
ATP2A3-206ENST00000397043 NEFLP07196 543 aa22.41■■□□□ 1.18
ATP2A3-206ENST00000397043 TIMELESSQ9UNS1 1208 aa22.4■■□□□ 1.18
ATP2A3-206ENST00000397043 CFAP43Q8NDM7 1665 aa22.38■■□□□ 1.17
ATP2A3-206ENST00000397043 CCDC18Q5T9S5 1454 aa22.38■■□□□ 1.17
ATP2A3-206ENST00000397043 EFCAB5A4FU69 1503 aa22.36■■□□□ 1.17
ATP2A3-206ENST00000397043 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
ATP2A3-206ENST00000397043 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.17
ATP2A3-206ENST00000397043 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
ATP2A3-206ENST00000397043 TSHZ2Q9NRE2 1034 aa22.32■■□□□ 1.16
ATP2A3-206ENST00000397043 MYT1Q01538 1121 aa22.31■■□□□ 1.16
ATP2A3-206ENST00000397043 FOXD1Q16676 465 aa22.31■■□□□ 1.16
ATP2A3-206ENST00000397043 NCOA2Q15596 1464 aa22.3■■□□□ 1.16
ATP2A3-206ENST00000397043 CNGB1Q14028 1251 aaPredicted RBP22.28■■□□□ 1.16
ATP2A3-206ENST00000397043 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.166e-7■■■■■ 28.7
ATP2A3-206ENST00000397043 CUL7Q14999 1698 aa22.27■■□□□ 1.16
ATP2A3-206ENST00000397043 MYOM3Q5VTT5 1437 aa22.26■■□□□ 1.15
ATP2A3-206ENST00000397043 SNAPC4Q5SXM2 1469 aa22.26■■□□□ 1.15
ATP2A3-206ENST00000397043 UACAQ9BZF9 1416 aa22.25■■□□□ 1.15
ATP2A3-206ENST00000397043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.152e-6■■■■□ 26.4
ATP2A3-206ENST00000397043 HNRNPUQ00839 825 aaKnown RBP eCLIP22.24■■□□□ 1.15
ATP2A3-206ENST00000397043 CTTNBP2Q8WZ74 1663 aa22.24■■□□□ 1.15
ATP2A3-206ENST00000397043 HFM1A2PYH4 1435 aa22.24■■□□□ 1.15
ATP2A3-206ENST00000397043 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
ATP2A3-206ENST00000397043 NAIPQ13075 1403 aa22.23■■□□□ 1.15
ATP2A3-206ENST00000397043 CCER2I3L3R5 266 aa22.22■■□□□ 1.15
ATP2A3-206ENST00000397043 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
ATP2A3-206ENST00000397043 HSPA5P11021 654 aaKnown RBP22.19■■□□□ 1.14
ATP2A3-206ENST00000397043 PTPN23Q9H3S7 1636 aa22.16■■□□□ 1.14
ATP2A3-206ENST00000397043 POLR3GLQ9BT43 218 aa22.15■■□□□ 1.14
ATP2A3-206ENST00000397043 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
ATP2A3-206ENST00000397043 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
ATP2A3-206ENST00000397043 EIF4G2P78344 907 aaKnown RBP eCLIP22.13■■□□□ 1.131e-9■■■■■ 47.3
ATP2A3-206ENST00000397043 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
ATP2A3-206ENST00000397043 L3MBTL2Q969R5 705 aa22.11■■□□□ 1.13
ATP2A3-206ENST00000397043 ZNF326Q5BKZ1 582 aaKnown RBP22.1■■□□□ 1.13
ATP2A3-206ENST00000397043 ZNF777Q9ULD5 760 aaPredicted RBP22.1■■□□□ 1.13
ATP2A3-206ENST00000397043 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
ATP2A3-206ENST00000397043 FBLN2P98095 1184 aa22.09■■□□□ 1.13
ATP2A3-206ENST00000397043 WASHC2AQ641Q2 1341 aa22.09■■□□□ 1.13
ATP2A3-206ENST00000397043 FAM9BQ8IZU0 186 aa22.09■■□□□ 1.13
ATP2A3-206ENST00000397043 ZNF644Q9H582 1327 aaPredicted RBP22.08■■□□□ 1.13
ATP2A3-206ENST00000397043 EHBP1L1Q8N3D4 1523 aa22.08■■□□□ 1.12
ATP2A3-206ENST00000397043 CDK13Q14004 1512 aaKnown RBP22.08■■□□□ 1.12
ATP2A3-206ENST00000397043 SLC4A1APQ9BWU0 796 aaKnown RBP22.07■■□□□ 1.12
ATP2A3-206ENST00000397043 MAGI3Q5TCQ9 1506 aa22.07■■□□□ 1.12
ATP2A3-206ENST00000397043 ABCA5Q8WWZ7 1642 aa22.06■■□□□ 1.12
ATP2A3-206ENST00000397043 SAMD9Q5K651 1589 aa22.06■■□□□ 1.12
ATP2A3-206ENST00000397043 LRRIQ1Q96JM4 1722 aa22.04■■□□□ 1.12
ATP2A3-206ENST00000397043 UGGT2Q9NYU1 1516 aa22.01■■□□□ 1.11
ATP2A3-206ENST00000397043 EPRSP07814 1512 aaKnown RBP22■■□□□ 1.11
ATP2A3-206ENST00000397043 CCDC184Q52MB2 194 aa22■■□□□ 1.11
ATP2A3-206ENST00000397043 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
ATP2A3-206ENST00000397043 SENP3-EIF4A1A0A087X0R7 540 aa21.98■■□□□ 1.11
ATP2A3-206ENST00000397043 MRS2Q9HD23 443 aa21.98■■□□□ 1.11
ATP2A3-206ENST00000397043 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
ATP2A3-206ENST00000397043 CDK11AQ9UQ88 783 aaPredicted RBP21.96■■□□□ 1.11
ATP2A3-206ENST00000397043 RBM19Q9Y4C8 960 aaKnown RBP21.95■■□□□ 1.11
ATP2A3-206ENST00000397043 NBPF8Q3BBV2 869 aa21.94■■□□□ 1.1
ATP2A3-206ENST00000397043 IQGAP2Q13576 1575 aa21.94■■□□□ 1.1
ATP2A3-206ENST00000397043 KDM6BO15054 1643 aa21.93■■□□□ 1.1
ATP2A3-206ENST00000397043 CFDP1Q9UEE9 299 aaPredicted RBP21.93■■□□□ 1.1
ATP2A3-206ENST00000397043 HECW1Q76N89 1606 aa21.93■■□□□ 1.1
ATP2A3-206ENST00000397043 THOC2Q8NI27 1593 aaKnown RBP21.92■■□□□ 1.1
ATP2A3-206ENST00000397043 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms