RNA–Protein interactions for RNA: ENST00000397011.2

EIF3B-202, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 2,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-202ENST00000397011 RAD54L2Q9Y4B4 1467 aa27.58■■■□□ 2.01
EIF3B-202ENST00000397011 FHOD3Q2V2M9 1422 aa27.57■■■□□ 2
EIF3B-202ENST00000397011 DDX10Q13206 875 aaKnown RBP27.53■■■□□ 2
EIF3B-202ENST00000397011 NESP48681 1621 aa27.49■■□□□ 1.99
EIF3B-202ENST00000397011 TIAM1Q13009 1591 aa27.47■■□□□ 1.99
EIF3B-202ENST00000397011 LRRC9Q6ZRR7 1453 aa27.46■■□□□ 1.99
EIF3B-202ENST00000397011 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
EIF3B-202ENST00000397011 SETD5Q9C0A6 1442 aa27.44■■□□□ 1.98
EIF3B-202ENST00000397011 ARID3CA6NKF2 412 aa27.42■■□□□ 1.98
EIF3B-202ENST00000397011 MAPKBP1O60336 1514 aa27.41■■□□□ 1.98
EIF3B-202ENST00000397011 BCANQ96GW7 911 aa27.4■■□□□ 1.98
EIF3B-202ENST00000397011 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
EIF3B-202ENST00000397011 CC2D2AQ9P2K1 1620 aa27.4■■□□□ 1.98
EIF3B-202ENST00000397011 SUPT16HQ9Y5B9 1047 aaKnown RBP27.39■■□□□ 1.98
EIF3B-202ENST00000397011 PCF11O94913 1555 aaKnown RBP27.36■■□□□ 1.97
EIF3B-202ENST00000397011 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
EIF3B-202ENST00000397011 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
EIF3B-202ENST00000397011 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
EIF3B-202ENST00000397011 POLA1P09884 1462 aaPredicted RBP27.29■■□□□ 1.96
EIF3B-202ENST00000397011 CHIC2Q9UKJ5 165 aa27.24■■□□□ 1.95
EIF3B-202ENST00000397011 TRIM52Q96A61 297 aa27.24■■□□□ 1.95
EIF3B-202ENST00000397011 MTUS2Q5JR59 1369 aa27.23■■□□□ 1.95
EIF3B-202ENST00000397011 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
EIF3B-202ENST00000397011 PRDM2Q13029 1718 aa27.22■■□□□ 1.95
EIF3B-202ENST00000397011 RRP7BPQ9NSQ0 103 aa27.16■■□□□ 1.94
EIF3B-202ENST00000397011 PPP1R15AO75807 674 aaPredicted RBP27.13■■□□□ 1.93
EIF3B-202ENST00000397011 MAP3K1Q13233 1512 aa27.11■■□□□ 1.93
EIF3B-202ENST00000397011 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
EIF3B-202ENST00000397011 DNMBPQ6XZF7 1577 aa27.11■■□□□ 1.93
EIF3B-202ENST00000397011 TONSLQ96HA7 1378 aa27.1■■□□□ 1.93
EIF3B-202ENST00000397011 FKBP8Q14318 412 aa27.09■■□□□ 1.93
EIF3B-202ENST00000397011 CASKIN1Q8WXD9 1431 aa27.09■■□□□ 1.93
EIF3B-202ENST00000397011 PTPRKQ15262 1439 aa27.08■■□□□ 1.93
EIF3B-202ENST00000397011 FGD6Q6ZV73 1430 aa27.07■■□□□ 1.92
EIF3B-202ENST00000397011 FYCO1Q9BQS8 1478 aa27.06■■□□□ 1.92
EIF3B-202ENST00000397011 CFAP43Q8NDM7 1665 aa27.04■■□□□ 1.92
EIF3B-202ENST00000397011 URB2Q14146 1524 aaKnown RBP27.03■■□□□ 1.92
EIF3B-202ENST00000397011 ANP32CO43423 234 aa27.02■■□□□ 1.92
EIF3B-202ENST00000397011 FOXD1Q16676 465 aa27.01■■□□□ 1.91
EIF3B-202ENST00000397011 FMN1Q68DA7 1419 aa27■■□□□ 1.91
EIF3B-202ENST00000397011 CCDC18Q5T9S5 1454 aa27■■□□□ 1.91
EIF3B-202ENST00000397011 TSHZ2Q9NRE2 1034 aa26.94■■□□□ 1.9
EIF3B-202ENST00000397011 GAPVD1Q14C86 1478 aa26.94■■□□□ 1.9
EIF3B-202ENST00000397011 CNGB1Q14028 1251 aaPredicted RBP26.93■■□□□ 1.9
EIF3B-202ENST00000397011 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
EIF3B-202ENST00000397011 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
EIF3B-202ENST00000397011 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.94e-7■■■■□ 26.3
EIF3B-202ENST00000397011 EFCAB5A4FU69 1503 aa26.92■■□□□ 1.9
EIF3B-202ENST00000397011 CTTNBP2Q8WZ74 1663 aa26.87■■□□□ 1.89
EIF3B-202ENST00000397011 IRX6P78412 446 aaPredicted RBP26.85■■□□□ 1.89
EIF3B-202ENST00000397011 NAIPQ13075 1403 aa26.85■■□□□ 1.89
EIF3B-202ENST00000397011 CUL7Q14999 1698 aa26.85■■□□□ 1.89
EIF3B-202ENST00000397011 MYOM3Q5VTT5 1437 aa26.84■■□□□ 1.89
EIF3B-202ENST00000397011 TIMELESSQ9UNS1 1208 aa26.83■■□□□ 1.89
EIF3B-202ENST00000397011 HFM1A2PYH4 1435 aa26.82■■□□□ 1.88
EIF3B-202ENST00000397011 UACAQ9BZF9 1416 aa26.81■■□□□ 1.88
EIF3B-202ENST00000397011 NEFLP07196 543 aa26.81■■□□□ 1.88
EIF3B-202ENST00000397011 LRRIQ1Q96JM4 1722 aa26.78■■□□□ 1.88
EIF3B-202ENST00000397011 HNRNPUQ00839 825 aaKnown RBP eCLIP26.78■■□□□ 1.88
EIF3B-202ENST00000397011 PTPN23Q9H3S7 1636 aa26.77■■□□□ 1.88
EIF3B-202ENST00000397011 MAGI3Q5TCQ9 1506 aa26.76■■□□□ 1.87
EIF3B-202ENST00000397011 HSPA5P11021 654 aaKnown RBP26.76■■□□□ 1.87
EIF3B-202ENST00000397011 PDS5BQ9NTI5 1447 aa26.75■■□□□ 1.87
EIF3B-202ENST00000397011 GRIN2BQ13224 1484 aa26.75■■□□□ 1.87
EIF3B-202ENST00000397011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.75■■□□□ 1.875e-6■■□□□ 13.9
EIF3B-202ENST00000397011 ZNF644Q9H582 1327 aaPredicted RBP26.74■■□□□ 1.87
EIF3B-202ENST00000397011 CDK13Q14004 1512 aaKnown RBP26.73■■□□□ 1.87
EIF3B-202ENST00000397011 SENP3-EIF4A1A0A087X0R7 540 aa26.7■■□□□ 1.86
EIF3B-202ENST00000397011 CCER2I3L3R5 266 aa26.69■■□□□ 1.86
EIF3B-202ENST00000397011 L3MBTL2Q969R5 705 aa26.68■■□□□ 1.86
EIF3B-202ENST00000397011 ABCA5Q8WWZ7 1642 aa26.68■■□□□ 1.86
EIF3B-202ENST00000397011 WASHC2AQ641Q2 1341 aa26.68■■□□□ 1.86
EIF3B-202ENST00000397011 MPHOSPH9Q99550 1183 aa26.68■■□□□ 1.86
EIF3B-202ENST00000397011 POLR3GLQ9BT43 218 aa26.68■■□□□ 1.86
EIF3B-202ENST00000397011 CCDC184Q52MB2 194 aa26.67■■□□□ 1.86
EIF3B-202ENST00000397011 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
EIF3B-202ENST00000397011 SAMD9Q5K651 1589 aa26.66■■□□□ 1.86
EIF3B-202ENST00000397011 FBLN2P98095 1184 aa26.65■■□□□ 1.86
EIF3B-202ENST00000397011 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
EIF3B-202ENST00000397011 ZNF777Q9ULD5 760 aaPredicted RBP26.65■■□□□ 1.86
EIF3B-202ENST00000397011 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
EIF3B-202ENST00000397011 SUPT6HQ7KZ85 1726 aaKnown RBP26.64■■□□□ 1.85
EIF3B-202ENST00000397011 KDM6BO15054 1643 aa26.63■■□□□ 1.85
EIF3B-202ENST00000397011 C11orf95C9JLR9 678 aaPredicted RBP26.62■■□□□ 1.85
EIF3B-202ENST00000397011 FAM9BQ8IZU0 186 aa26.61■■□□□ 1.85
EIF3B-202ENST00000397011 EHBP1L1Q8N3D4 1523 aa26.6■■□□□ 1.85
EIF3B-202ENST00000397011 EIF4G2P78344 907 aaKnown RBP eCLIP26.59■■□□□ 1.851e-6■■■□□ 15.3
EIF3B-202ENST00000397011 UGGT2Q9NYU1 1516 aa26.58■■□□□ 1.85
EIF3B-202ENST00000397011 EPRSP07814 1512 aaKnown RBP26.57■■□□□ 1.84
EIF3B-202ENST00000397011 SLC4A1APQ9BWU0 796 aaKnown RBP26.56■■□□□ 1.84
EIF3B-202ENST00000397011 DENND4BO75064 1496 aaPredicted RBP26.55■■□□□ 1.84
EIF3B-202ENST00000397011 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
EIF3B-202ENST00000397011 NBPF8Q3BBV2 869 aa26.53■■□□□ 1.84
EIF3B-202ENST00000397011 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
EIF3B-202ENST00000397011 KDM5BQ9UGL1 1544 aa26.52■■□□□ 1.84
EIF3B-202ENST00000397011 MYT1Q01538 1121 aa26.5■■□□□ 1.83
EIF3B-202ENST00000397011 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
EIF3B-202ENST00000397011 IQGAP2Q13576 1575 aa26.47■■□□□ 1.83
EIF3B-202ENST00000397011 RBM19Q9Y4C8 960 aaKnown RBP26.46■■□□□ 1.83
EIF3B-202ENST00000397011 MRS2Q9HD23 443 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms