RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 NEFLP07196 543 aa11.74□□□□□ -0.53
BDNF-206ENST00000395983 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
BDNF-206ENST00000395983 FAM50AQ14320 339 aaKnown RBP11.72□□□□□ -0.53
BDNF-206ENST00000395983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.72□□□□□ -0.53
BDNF-206ENST00000395983 CFAP43Q8NDM7 1665 aa11.72□□□□□ -0.53
BDNF-206ENST00000395983 EFCAB5A4FU69 1503 aa11.71□□□□□ -0.53
BDNF-206ENST00000395983 MAPKBP1O60336 1514 aa11.7□□□□□ -0.54
BDNF-206ENST00000395983 FGD5Q6ZNL6 1462 aa11.69□□□□□ -0.54
BDNF-206ENST00000395983 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
BDNF-206ENST00000395983 ANP32CO43423 234 aa11.68□□□□□ -0.54
BDNF-206ENST00000395983 AQRO60306 1485 aaKnown RBP eCLIP11.68□□□□□ -0.54
BDNF-206ENST00000395983 CCER2I3L3R5 266 aa11.68□□□□□ -0.54
BDNF-206ENST00000395983 ATP1B4Q9UN42 357 aaPredicted RBP11.66□□□□□ -0.54
BDNF-206ENST00000395983 FMN1Q68DA7 1419 aa11.66□□□□□ -0.54
BDNF-206ENST00000395983 PHLDB1Q86UU1 1377 aa11.65□□□□□ -0.54
BDNF-206ENST00000395983 CASKIN1Q8WXD9 1431 aa11.65□□□□□ -0.55
BDNF-206ENST00000395983 CC2D2AQ9P2K1 1620 aa11.64□□□□□ -0.55
BDNF-206ENST00000395983 PCF11O94913 1555 aaKnown RBP11.64□□□□□ -0.55
BDNF-206ENST00000395983 CUL7Q14999 1698 aa11.64□□□□□ -0.55
BDNF-206ENST00000395983 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
BDNF-206ENST00000395983 DDX10Q13206 875 aaKnown RBP11.64□□□□□ -0.55
BDNF-206ENST00000395983 WDR97A6NE52 1622 aa11.62□□□□□ -0.55
BDNF-206ENST00000395983 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
BDNF-206ENST00000395983 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
BDNF-206ENST00000395983 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
BDNF-206ENST00000395983 FANCD2Q9BXW9 1451 aa11.6□□□□□ -0.55
BDNF-206ENST00000395983 TSHZ2Q9NRE2 1034 aa11.6□□□□□ -0.55
BDNF-206ENST00000395983 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
BDNF-206ENST00000395983 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
BDNF-206ENST00000395983 SIN3AQ96ST3 1273 aa11.58□□□□□ -0.55
BDNF-206ENST00000395983 FKBP8Q14318 412 aa11.58□□□□□ -0.56
BDNF-206ENST00000395983 FGD6Q6ZV73 1430 aa11.58□□□□□ -0.56
BDNF-206ENST00000395983 FHOD3Q2V2M9 1422 aa11.57□□□□□ -0.56
BDNF-206ENST00000395983 UACAQ9BZF9 1416 aa11.57□□□□□ -0.56
BDNF-206ENST00000395983 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
BDNF-206ENST00000395983 ANP32EQ9BTT0 268 aa11.56□□□□□ -0.56
BDNF-206ENST00000395983 CCDC18Q5T9S5 1454 aa11.56□□□□□ -0.56
BDNF-206ENST00000395983 THOC2Q8NI27 1593 aaKnown RBP11.55□□□□□ -0.56
BDNF-206ENST00000395983 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
BDNF-206ENST00000395983 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
BDNF-206ENST00000395983 POLA1P09884 1462 aaPredicted RBP11.52□□□□□ -0.57
BDNF-206ENST00000395983 SUPT6HQ7KZ85 1726 aaKnown RBP11.51□□□□□ -0.57
BDNF-206ENST00000395983 EHBP1L1Q8N3D4 1523 aa11.51□□□□□ -0.57
BDNF-206ENST00000395983 MYOM3Q5VTT5 1437 aa11.51□□□□□ -0.57
BDNF-206ENST00000395983 BCANQ96GW7 911 aa11.5□□□□□ -0.57
BDNF-206ENST00000395983 KCNH8Q96L42 1107 aa11.5□□□□□ -0.57
BDNF-206ENST00000395983 KIF21AQ7Z4S6 1674 aa11.5□□□□□ -0.57
BDNF-206ENST00000395983 PTPN23Q9H3S7 1636 aa11.5□□□□□ -0.57
BDNF-206ENST00000395983 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
BDNF-206ENST00000395983 RAD54L2Q9Y4B4 1467 aa11.48□□□□□ -0.57
BDNF-206ENST00000395983 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
BDNF-206ENST00000395983 NCOA2Q15596 1464 aa11.47□□□□□ -0.57
BDNF-206ENST00000395983 TRIM52Q96A61 297 aa11.46□□□□□ -0.57
BDNF-206ENST00000395983 SAMD9Q5K651 1589 aa11.46□□□□□ -0.57
BDNF-206ENST00000395983 NAIPQ13075 1403 aa11.45□□□□□ -0.58
BDNF-206ENST00000395983 AKNAQ7Z591 1439 aa11.45□□□□□ -0.58
BDNF-206ENST00000395983 LAMC3Q9Y6N6 1575 aa11.45□□□□□ -0.58
BDNF-206ENST00000395983 CDK11AQ9UQ88 783 aaPredicted RBP11.44□□□□□ -0.58
BDNF-206ENST00000395983 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
BDNF-206ENST00000395983 GRIN2BQ13224 1484 aa11.43□□□□□ -0.58
BDNF-206ENST00000395983 GAPVD1Q14C86 1478 aa11.42□□□□□ -0.58
BDNF-206ENST00000395983 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
BDNF-206ENST00000395983 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
BDNF-206ENST00000395983 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
BDNF-206ENST00000395983 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
BDNF-206ENST00000395983 UGGT2Q9NYU1 1516 aa11.41□□□□□ -0.58
BDNF-206ENST00000395983 PDS5BQ9NTI5 1447 aa11.41□□□□□ -0.58
BDNF-206ENST00000395983 ERICH6Q7L0X2 663 aa11.41□□□□□ -0.58
BDNF-206ENST00000395983 GCC2Q8IWJ2 1684 aa11.4□□□□□ -0.58
BDNF-206ENST00000395983 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
BDNF-206ENST00000395983 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
BDNF-206ENST00000395983 TCOF1Q13428 1488 aaKnown RBP11.4□□□□□ -0.58
BDNF-206ENST00000395983 PTPRKQ15262 1439 aa11.37□□□□□ -0.59
BDNF-206ENST00000395983 ARHGEF11O15085 1522 aa11.37□□□□□ -0.59
BDNF-206ENST00000395983 CNTLNQ9NXG0 1405 aa11.37□□□□□ -0.59
BDNF-206ENST00000395983 HSPA5P11021 654 aaKnown RBP11.36□□□□□ -0.59
BDNF-206ENST00000395983 MYT1LQ9UL68 1186 aa11.36□□□□□ -0.59
BDNF-206ENST00000395983 TDRD9Q8NDG6 1382 aaKnown RBP11.35□□□□□ -0.59
BDNF-206ENST00000395983 URB2Q14146 1524 aaKnown RBP11.35□□□□□ -0.59
BDNF-206ENST00000395983 RRP7BPQ9NSQ0 103 aa11.35□□□□□ -0.59
BDNF-206ENST00000395983 PPP4R2Q9NY27 417 aa11.34□□□□□ -0.59
BDNF-206ENST00000395983 FANCIQ9NVI1 1328 aa11.34□□□□□ -0.59
BDNF-206ENST00000395983 NESP48681 1621 aa11.33□□□□□ -0.6
BDNF-206ENST00000395983 ROCK1Q13464 1354 aa11.32□□□□□ -0.6
BDNF-206ENST00000395983 MPHOSPH9Q99550 1183 aa11.32□□□□□ -0.6
BDNF-206ENST00000395983 LRRIQ1Q96JM4 1722 aa11.32□□□□□ -0.6
BDNF-206ENST00000395983 IQGAP2Q13576 1575 aa11.32□□□□□ -0.6
BDNF-206ENST00000395983 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
BDNF-206ENST00000395983 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
BDNF-206ENST00000395983 EPRSP07814 1512 aaKnown RBP11.31□□□□□ -0.6
BDNF-206ENST00000395983 KDM5BQ9UGL1 1544 aa11.3□□□□□ -0.6
BDNF-206ENST00000395983 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
BDNF-206ENST00000395983 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
BDNF-206ENST00000395983 CCDC7Q96M83 1385 aa11.29□□□□□ -0.6
BDNF-206ENST00000395983 NCOA1Q15788 1441 aa11.29□□□□□ -0.6
BDNF-206ENST00000395983 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
BDNF-206ENST00000395983 L3MBTL2Q969R5 705 aa11.28□□□□□ -0.6
BDNF-206ENST00000395983 RPRD2Q5VT52 1461 aaKnown RBP11.28□□□□□ -0.6
BDNF-206ENST00000395983 PBRM1Q86U86 1689 aa11.26□□□□□ -0.61
BDNF-206ENST00000395983 WDR62O43379 1518 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms