RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 IGF1RP08069 1367 aa12.41□□□□□ -0.42
BDNF-204ENST00000395980 WDR97A6NE52 1622 aa12.39□□□□□ -0.43
BDNF-204ENST00000395980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
BDNF-204ENST00000395980 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
BDNF-204ENST00000395980 PHLDB1Q86UU1 1377 aa12.37□□□□□ -0.43
BDNF-204ENST00000395980 CCER2I3L3R5 266 aa12.36□□□□□ -0.43
BDNF-204ENST00000395980 CARMIL1Q5VZK9 1371 aa12.36□□□□□ -0.43
BDNF-204ENST00000395980 ITGAEP38570 1179 aa12.36□□□□□ -0.43
BDNF-204ENST00000395980 PPP1R15AO75807 674 aaPredicted RBP12.35□□□□□ -0.43
BDNF-204ENST00000395980 PCF11O94913 1555 aaKnown RBP12.34□□□□□ -0.43
BDNF-204ENST00000395980 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
BDNF-204ENST00000395980 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.44
BDNF-204ENST00000395980 EFCAB5A4FU69 1503 aa12.33□□□□□ -0.44
BDNF-204ENST00000395980 FYCO1Q9BQS8 1478 aa12.33□□□□□ -0.44
BDNF-204ENST00000395980 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
BDNF-204ENST00000395980 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
BDNF-204ENST00000395980 NEFLP07196 543 aa12.3□□□□□ -0.44
BDNF-204ENST00000395980 FKBP8Q14318 412 aa12.29□□□□□ -0.44
BDNF-204ENST00000395980 CASKIN1Q8WXD9 1431 aa12.29□□□□□ -0.44
BDNF-204ENST00000395980 SIN3AQ96ST3 1273 aa12.28□□□□□ -0.44
BDNF-204ENST00000395980 CADPSQ9ULU8 1353 aa12.28□□□□□ -0.44
BDNF-204ENST00000395980 FAM50AQ14320 339 aaKnown RBP12.27□□□□□ -0.44
BDNF-204ENST00000395980 ANP32CO43423 234 aa12.27□□□□□ -0.45
BDNF-204ENST00000395980 CC2D2AQ9P2K1 1620 aa12.25□□□□□ -0.45
BDNF-204ENST00000395980 CUL7Q14999 1698 aa12.24□□□□□ -0.45
BDNF-204ENST00000395980 FGD6Q6ZV73 1430 aa12.23□□□□□ -0.45
BDNF-204ENST00000395980 UACAQ9BZF9 1416 aa12.23□□□□□ -0.45
BDNF-204ENST00000395980 CTTNBP2Q8WZ74 1663 aa12.23□□□□□ -0.45
BDNF-204ENST00000395980 BCANQ96GW7 911 aa12.23□□□□□ -0.45
BDNF-204ENST00000395980 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
BDNF-204ENST00000395980 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
BDNF-204ENST00000395980 ABCA10Q8WWZ4 1543 aa12.22□□□□□ -0.45
BDNF-204ENST00000395980 TONSLQ96HA7 1378 aa12.22□□□□□ -0.45
BDNF-204ENST00000395980 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
BDNF-204ENST00000395980 FHOD3Q2V2M9 1422 aa12.21□□□□□ -0.45
BDNF-204ENST00000395980 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
BDNF-204ENST00000395980 PTPN23Q9H3S7 1636 aa12.2□□□□□ -0.46
BDNF-204ENST00000395980 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
BDNF-204ENST00000395980 SNAPC4Q5SXM2 1469 aa12.19□□□□□ -0.46
BDNF-204ENST00000395980 THOC2Q8NI27 1593 aaKnown RBP12.19□□□□□ -0.46
BDNF-204ENST00000395980 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
BDNF-204ENST00000395980 KDM5BQ9UGL1 1544 aa12.16□□□□□ -0.46
BDNF-204ENST00000395980 TRIM52Q96A61 297 aa12.15□□□□□ -0.46
BDNF-204ENST00000395980 SAMD9Q5K651 1589 aa12.15□□□□□ -0.46
BDNF-204ENST00000395980 NAIPQ13075 1403 aa12.14□□□□□ -0.47
BDNF-204ENST00000395980 ERICH6BQ5W0A0 696 aa12.14□□□□□ -0.47
BDNF-204ENST00000395980 MYOM3Q5VTT5 1437 aa12.14□□□□□ -0.47
BDNF-204ENST00000395980 PTPRKQ15262 1439 aa12.13□□□□□ -0.47
BDNF-204ENST00000395980 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
BDNF-204ENST00000395980 EHBP1L1Q8N3D4 1523 aa12.13□□□□□ -0.47
BDNF-204ENST00000395980 MTUS2Q5JR59 1369 aa12.13□□□□□ -0.47
BDNF-204ENST00000395980 SUPT6HQ7KZ85 1726 aaKnown RBP12.13□□□□□ -0.47
BDNF-204ENST00000395980 P3H3Q8IVL6 736 aa12.13□□□□□ -0.47
BDNF-204ENST00000395980 TOPBP1Q92547 1522 aa12.12□□□□□ -0.47
BDNF-204ENST00000395980 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
BDNF-204ENST00000395980 NCOA2Q15596 1464 aa12.11□□□□□ -0.47
BDNF-204ENST00000395980 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
BDNF-204ENST00000395980 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
BDNF-204ENST00000395980 HECW1Q76N89 1606 aa12.11□□□□□ -0.47
BDNF-204ENST00000395980 GRIN2BQ13224 1484 aa12.11□□□□□ -0.47
BDNF-204ENST00000395980 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
BDNF-204ENST00000395980 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
BDNF-204ENST00000395980 GCC2Q8IWJ2 1684 aa12.11□□□□□ -0.47
BDNF-204ENST00000395980 ARHGEF11O15085 1522 aa12.1□□□□□ -0.47
BDNF-204ENST00000395980 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
BDNF-204ENST00000395980 LRRIQ1Q96JM4 1722 aa12.1□□□□□ -0.47
BDNF-204ENST00000395980 UGGT2Q9NYU1 1516 aa12.09□□□□□ -0.47
BDNF-204ENST00000395980 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.48
BDNF-204ENST00000395980 BCL11AQ9H165 835 aa12.08□□□□□ -0.48
BDNF-204ENST00000395980 HNRNPUQ00839 825 aaKnown RBP eCLIP12.06□□□□□ -0.48
BDNF-204ENST00000395980 ABCA5Q8WWZ7 1642 aa12.05□□□□□ -0.48
BDNF-204ENST00000395980 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
BDNF-204ENST00000395980 CNTLNQ9NXG0 1405 aa12.05□□□□□ -0.48
BDNF-204ENST00000395980 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
BDNF-204ENST00000395980 MSH5O43196 834 aa12.02□□□□□ -0.49
BDNF-204ENST00000395980 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
BDNF-204ENST00000395980 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
BDNF-204ENST00000395980 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
BDNF-204ENST00000395980 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
BDNF-204ENST00000395980 NCOA1Q15788 1441 aa12.01□□□□□ -0.49
BDNF-204ENST00000395980 MIA2Q96PC5 1412 aa12□□□□□ -0.49
BDNF-204ENST00000395980 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
BDNF-204ENST00000395980 POLR1AO95602 1720 aaPredicted RBP11.99□□□□□ -0.49
BDNF-204ENST00000395980 MAGI3Q5TCQ9 1506 aa11.99□□□□□ -0.49
BDNF-204ENST00000395980 GAPVD1Q14C86 1478 aa11.98□□□□□ -0.49
BDNF-204ENST00000395980 LAMC3Q9Y6N6 1575 aa11.98□□□□□ -0.49
BDNF-204ENST00000395980 ZBED9Q6R2W3 1325 aa11.97□□□□□ -0.49
BDNF-204ENST00000395980 CCDC7Q96M83 1385 aa11.97□□□□□ -0.49
BDNF-204ENST00000395980 URB2Q14146 1524 aaKnown RBP11.97□□□□□ -0.49
BDNF-204ENST00000395980 PRKRIP1Q9H875 184 aaPredicted RBP11.95□□□□□ -0.5
BDNF-204ENST00000395980 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
BDNF-204ENST00000395980 KDM6BO15054 1643 aa11.95□□□□□ -0.5
BDNF-204ENST00000395980 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
BDNF-204ENST00000395980 ROCK1Q13464 1354 aa11.94□□□□□ -0.5
BDNF-204ENST00000395980 NESP48681 1621 aa11.94□□□□□ -0.5
BDNF-204ENST00000395980 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
BDNF-204ENST00000395980 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
BDNF-204ENST00000395980 EPRSP07814 1512 aaKnown RBP11.93□□□□□ -0.5
BDNF-204ENST00000395980 RRP7BPQ9NSQ0 103 aa11.93□□□□□ -0.5
BDNF-204ENST00000395980 SPATA31E1Q6ZUB1 1445 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms