RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 ABCA5Q8WWZ7 1642 aa31.69■■■□□ 2.66
CLDND1-202ENST00000394180 GAPVD1Q14C86 1478 aa31.69■■■□□ 2.66
CLDND1-202ENST00000394180 RAPGEF2Q9Y4G8 1499 aa31.65■■■□□ 2.66
CLDND1-202ENST00000394180 PRXQ9BXM0 1461 aa31.64■■■□□ 2.66
CLDND1-202ENST00000394180 CEP162Q5TB80 1403 aa31.63■■■□□ 2.65
CLDND1-202ENST00000394180 KIF21BO75037 1637 aa31.63■■■□□ 2.65
CLDND1-202ENST00000394180 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
CLDND1-202ENST00000394180 UBTFP17480 764 aaKnown RBP31.6■■■□□ 2.65
CLDND1-202ENST00000394180 GOLGA3Q08378 1498 aa31.6■■■□□ 2.65
CLDND1-202ENST00000394180 CARMIL1Q5VZK9 1371 aa31.57■■■□□ 2.64
CLDND1-202ENST00000394180 EIF4G3O43432 1585 aaKnown RBP31.53■■■□□ 2.64
CLDND1-202ENST00000394180 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.64
CLDND1-202ENST00000394180 PBRM1Q86U86 1689 aa31.5■■■□□ 2.63
CLDND1-202ENST00000394180 GRIN2BQ13224 1484 aa31.46■■■□□ 2.63
CLDND1-202ENST00000394180 CUL7Q14999 1698 aa31.43■■■□□ 2.62
CLDND1-202ENST00000394180 SNAPC4Q5SXM2 1469 aa31.35■■■□□ 2.61
CLDND1-202ENST00000394180 RANGAP1P46060 587 aaPredicted RBP31.34■■■□□ 2.61
CLDND1-202ENST00000394180 ADAMTS12P58397 1594 aa31.31■■■□□ 2.6
CLDND1-202ENST00000394180 FHAD1B1AJZ9 1412 aa31.3■■■□□ 2.6
CLDND1-202ENST00000394180 PRKCSHP14314 528 aaPredicted RBP31.27■■■□□ 2.6
CLDND1-202ENST00000394180 ERICH6Q7L0X2 663 aa31.26■■■□□ 2.6
CLDND1-202ENST00000394180 MYT1LQ9UL68 1186 aa31.26■■■□□ 2.6
CLDND1-202ENST00000394180 MAGI1Q96QZ7 1491 aaPredicted RBP31.22■■■□□ 2.59
CLDND1-202ENST00000394180 FBLN2P98095 1184 aa31.19■■■□□ 2.58
CLDND1-202ENST00000394180 CHMP7Q8WUX9 453 aaPredicted RBP31.15■■■□□ 2.58
CLDND1-202ENST00000394180 RBM19Q9Y4C8 960 aaKnown RBP31.15■■■□□ 2.58
CLDND1-202ENST00000394180 CLIP1P30622 1438 aa31.13■■■□□ 2.57
CLDND1-202ENST00000394180 SYNJ2O15056 1496 aa31.13■■■□□ 2.57
CLDND1-202ENST00000394180 GRIN2AQ12879 1464 aa31.11■■■□□ 2.57
CLDND1-202ENST00000394180 CTTNBP2Q8WZ74 1663 aa31.05■■■□□ 2.56
CLDND1-202ENST00000394180 FANCIQ9NVI1 1328 aa31.01■■■□□ 2.55
CLDND1-202ENST00000394180 HNRNPUL2Q1KMD3 747 aaKnown RBP30.99■■■□□ 2.55
CLDND1-202ENST00000394180 ARHGAP35Q9NRY4 1499 aa30.95■■■□□ 2.54
CLDND1-202ENST00000394180 DHX57Q6P158 1386 aaKnown RBP30.95■■■□□ 2.54
CLDND1-202ENST00000394180 CEP170Q5SW79 1584 aa30.94■■■□□ 2.54
CLDND1-202ENST00000394180 CHD1O14646 1710 aa30.92■■■□□ 2.54
CLDND1-202ENST00000394180 P3H3Q8IVL6 736 aa30.92■■■□□ 2.54
CLDND1-202ENST00000394180 VPS8Q8N3P4 1428 aa30.9■■■□□ 2.54
CLDND1-202ENST00000394180 ARAP1Q96P48 1450 aa30.89■■■□□ 2.54
CLDND1-202ENST00000394180 IQGAP2Q13576 1575 aa30.89■■■□□ 2.53
CLDND1-202ENST00000394180 FKBP8Q14318 412 aa30.88■■■□□ 2.53
CLDND1-202ENST00000394180 NUP160Q12769 1436 aa30.87■■■□□ 2.53
CLDND1-202ENST00000394180 NEFLP07196 543 aa30.87■■■□□ 2.53
CLDND1-202ENST00000394180 KIAA0586Q9BVV6 1533 aa30.86■■■□□ 2.53
CLDND1-202ENST00000394180 MSH5O43196 834 aa30.79■■■□□ 2.52
CLDND1-202ENST00000394180 FHOD3Q2V2M9 1422 aa30.78■■■□□ 2.52
CLDND1-202ENST00000394180 EFCAB5A4FU69 1503 aa30.74■■■□□ 2.51
CLDND1-202ENST00000394180 SAMD9Q5K651 1589 aa30.73■■■□□ 2.51
CLDND1-202ENST00000394180 APLP2Q06481 763 aa30.7■■■□□ 2.51
CLDND1-202ENST00000394180 JPH4Q96JJ6 628 aa30.7■■■□□ 2.51
CLDND1-202ENST00000394180 UGGT2Q9NYU1 1516 aa30.7■■■□□ 2.51
CLDND1-202ENST00000394180 BCANQ96GW7 911 aa30.7■■■□□ 2.5
CLDND1-202ENST00000394180 DISP1Q96F81 1524 aa30.64■■■□□ 2.5
CLDND1-202ENST00000394180 CCER2I3L3R5 266 aa30.61■■■□□ 2.49
CLDND1-202ENST00000394180 ERICH6BQ5W0A0 696 aa30.61■■■□□ 2.49
CLDND1-202ENST00000394180 KIAA0556O60303 1618 aa30.58■■■□□ 2.49
CLDND1-202ENST00000394180 CLASP1Q7Z460 1538 aa30.53■■■□□ 2.48
CLDND1-202ENST00000394180 ATP1B4Q9UN42 357 aaPredicted RBP30.53■■■□□ 2.48
CLDND1-202ENST00000394180 PRG4Q92954 1404 aaPredicted RBP30.52■■■□□ 2.48
CLDND1-202ENST00000394180 FMN1Q68DA7 1419 aa30.51■■■□□ 2.47
CLDND1-202ENST00000394180 PCF11O94913 1555 aaKnown RBP30.5■■■□□ 2.47
CLDND1-202ENST00000394180 RRBP1Q9P2E9 1410 aaKnown RBP30.49■■■□□ 2.47
CLDND1-202ENST00000394180 OSCARQ8IYS5 282 aa30.49■■■□□ 2.47
CLDND1-202ENST00000394180 CDK11AQ9UQ88 783 aaPredicted RBP30.49■■■□□ 2.47
CLDND1-202ENST00000394180 CARMIL2Q6F5E8 1435 aa30.48■■■□□ 2.47
CLDND1-202ENST00000394180 KCNH8Q96L42 1107 aa30.48■■■□□ 2.47
CLDND1-202ENST00000394180 DEKP35659 375 aaKnown RBP30.46■■■□□ 2.47
CLDND1-202ENST00000394180 SHROOM2Q13796 1616 aa30.46■■■□□ 2.47
CLDND1-202ENST00000394180 ERCC6L2Q5T890 1561 aa30.43■■■□□ 2.46
CLDND1-202ENST00000394180 CASKIN1Q8WXD9 1431 aa30.41■■■□□ 2.46
CLDND1-202ENST00000394180 FYCO1Q9BQS8 1478 aa30.38■■■□□ 2.45
CLDND1-202ENST00000394180 KANK4Q5T7N3 995 aaPredicted RBP30.37■■■□□ 2.45
CLDND1-202ENST00000394180 ARID3CA6NKF2 412 aa30.33■■■□□ 2.45
CLDND1-202ENST00000394180 PPP1R15AO75807 674 aaPredicted RBP30.32■■■□□ 2.45
CLDND1-202ENST00000394180 TIMELESSQ9UNS1 1208 aa30.32■■■□□ 2.45
CLDND1-202ENST00000394180 PLB1Q6P1J6 1458 aa30.3■■■□□ 2.44
CLDND1-202ENST00000394180 ITGAEP38570 1179 aa30.29■■■□□ 2.44
CLDND1-202ENST00000394180 LRRIQ1Q96JM4 1722 aa30.28■■■□□ 2.44
CLDND1-202ENST00000394180 PTPRGP23470 1445 aa30.28■■■□□ 2.44
CLDND1-202ENST00000394180 TIAM1Q13009 1591 aa30.27■■■□□ 2.44
CLDND1-202ENST00000394180 RAPGEF6Q8TEU7 1601 aa30.23■■■□□ 2.43
CLDND1-202ENST00000394180 MAPKBP1O60336 1514 aa30.23■■■□□ 2.43
CLDND1-202ENST00000394180 HECW1Q76N89 1606 aa30.22■■■□□ 2.43
CLDND1-202ENST00000394180 NUP153P49790 1475 aaKnown RBP30.2■■■□□ 2.43
CLDND1-202ENST00000394180 MAP3K1Q13233 1512 aa30.2■■■□□ 2.42
CLDND1-202ENST00000394180 CFAP43Q8NDM7 1665 aa30.19■■■□□ 2.42
CLDND1-202ENST00000394180 ANP32CO43423 234 aa30.19■■■□□ 2.42
CLDND1-202ENST00000394180 EPRSP07814 1512 aaKnown RBP30.18■■■□□ 2.42
CLDND1-202ENST00000394180 CDK13Q14004 1512 aaKnown RBP30.18■■■□□ 2.42
CLDND1-202ENST00000394180 LRRC9Q6ZRR7 1453 aa30.16■■■□□ 2.42
CLDND1-202ENST00000394180 DDX10Q13206 875 aaKnown RBP30.16■■■□□ 2.42
CLDND1-202ENST00000394180 ABCA8O94911 1581 aa30.14■■■□□ 2.42
CLDND1-202ENST00000394180 CCNB3Q8WWL7 1395 aa30.12■■■□□ 2.41
CLDND1-202ENST00000394180 CCDC18Q5T9S5 1454 aa30.11■■■□□ 2.41
CLDND1-202ENST00000394180 PPP4R2Q9NY27 417 aa30.1■■■□□ 2.41
CLDND1-202ENST00000394180 ANO8Q9HCE9 1232 aaPredicted RBP30.09■■■□□ 2.41
CLDND1-202ENST00000394180 NOP58Q9Y2X3 529 aaKnown RBP30.07■■■□□ 2.4
CLDND1-202ENST00000394180 UACAQ9BZF9 1416 aa30.07■■■□□ 2.4
CLDND1-202ENST00000394180 TRIM52Q96A61 297 aa30.07■■■□□ 2.4
CLDND1-202ENST00000394180 MTUS2Q5JR59 1369 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms