RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
NKIRAS2-203ENST00000393879 NEFLP07196 543 aa14.06□□□□□ -0.16
NKIRAS2-203ENST00000393879 CDK11AQ9UQ88 783 aaPredicted RBP14.05□□□□□ -0.16
NKIRAS2-203ENST00000393879 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
NKIRAS2-203ENST00000393879 LAMC3Q9Y6N6 1575 aa14.04□□□□□ -0.16
NKIRAS2-203ENST00000393879 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
NKIRAS2-203ENST00000393879 TONSLQ96HA7 1378 aa14.02□□□□□ -0.17
NKIRAS2-203ENST00000393879 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
NKIRAS2-203ENST00000393879 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
NKIRAS2-203ENST00000393879 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
NKIRAS2-203ENST00000393879 ANP32CO43423 234 aa13.98□□□□□ -0.17
NKIRAS2-203ENST00000393879 RAD54L2Q9Y4B4 1467 aa13.98□□□□□ -0.17
NKIRAS2-203ENST00000393879 CHMP7Q8WUX9 453 aaPredicted RBP13.98□□□□□ -0.17
NKIRAS2-203ENST00000393879 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
NKIRAS2-203ENST00000393879 ZNF777Q9ULD5 760 aaPredicted RBP13.97□□□□□ -0.17
NKIRAS2-203ENST00000393879 FMN1Q68DA7 1419 aa13.95□□□□□ -0.18
NKIRAS2-203ENST00000393879 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
NKIRAS2-203ENST00000393879 DDX10Q13206 875 aaKnown RBP13.95□□□□□ -0.18
NKIRAS2-203ENST00000393879 SETD5Q9C0A6 1442 aa13.94□□□□□ -0.18
NKIRAS2-203ENST00000393879 RRP7BPQ9NSQ0 103 aa13.93□□□□□ -0.18
NKIRAS2-203ENST00000393879 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
NKIRAS2-203ENST00000393879 SIN3AQ96ST3 1273 aa13.93□□□□□ -0.18
NKIRAS2-203ENST00000393879 ABCA5Q8WWZ7 1642 aa13.92□□□□□ -0.18
NKIRAS2-203ENST00000393879 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
NKIRAS2-203ENST00000393879 NESP48681 1621 aa13.92□□□□□ -0.18
NKIRAS2-203ENST00000393879 DNMBPQ6XZF7 1577 aa13.91□□□□□ -0.18
NKIRAS2-203ENST00000393879 KIF21AQ7Z4S6 1674 aa13.89□□□□□ -0.19
NKIRAS2-203ENST00000393879 CNGB1Q14028 1251 aaPredicted RBP13.89□□□□□ -0.19
NKIRAS2-203ENST00000393879 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
NKIRAS2-203ENST00000393879 ZNF326Q5BKZ1 582 aaKnown RBP13.88□□□□□ -0.19
NKIRAS2-203ENST00000393879 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
NKIRAS2-203ENST00000393879 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
NKIRAS2-203ENST00000393879 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
NKIRAS2-203ENST00000393879 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
NKIRAS2-203ENST00000393879 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
NKIRAS2-203ENST00000393879 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
NKIRAS2-203ENST00000393879 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.2
NKIRAS2-203ENST00000393879 LRRC9Q6ZRR7 1453 aa13.82□□□□□ -0.2
NKIRAS2-203ENST00000393879 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
NKIRAS2-203ENST00000393879 CUL7Q14999 1698 aa13.8□□□□□ -0.2
NKIRAS2-203ENST00000393879 PHLDB1Q86UU1 1377 aa13.8□□□□□ -0.2
NKIRAS2-203ENST00000393879 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
NKIRAS2-203ENST00000393879 CFDP1Q9UEE9 299 aaPredicted RBP13.78□□□□□ -0.2
NKIRAS2-203ENST00000393879 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
NKIRAS2-203ENST00000393879 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
NKIRAS2-203ENST00000393879 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.2
NKIRAS2-203ENST00000393879 CTTNBP2Q8WZ74 1663 aa13.77□□□□□ -0.21
NKIRAS2-203ENST00000393879 TSPY4P0CV99 314 aa13.76□□□□□ -0.21
NKIRAS2-203ENST00000393879 TSPY10P0CW01 314 aa13.76□□□□□ -0.21
NKIRAS2-203ENST00000393879 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
NKIRAS2-203ENST00000393879 BCANQ96GW7 911 aa13.76□□□□□ -0.21
NKIRAS2-203ENST00000393879 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
NKIRAS2-203ENST00000393879 WDR62O43379 1518 aa13.75□□□□□ -0.21
NKIRAS2-203ENST00000393879 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
NKIRAS2-203ENST00000393879 EFCAB5A4FU69 1503 aa13.73□□□□□ -0.21
NKIRAS2-203ENST00000393879 FYCO1Q9BQS8 1478 aa13.73□□□□□ -0.21
NKIRAS2-203ENST00000393879 EIF4G2P78344 907 aaKnown RBP eCLIP13.73□□□□□ -0.21
NKIRAS2-203ENST00000393879 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.212e-9■■■■■ 47.9
NKIRAS2-203ENST00000393879 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
NKIRAS2-203ENST00000393879 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
NKIRAS2-203ENST00000393879 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
NKIRAS2-203ENST00000393879 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
NKIRAS2-203ENST00000393879 CARMIL2Q6F5E8 1435 aa13.67□□□□□ -0.22
NKIRAS2-203ENST00000393879 SAMD9Q5K651 1589 aa13.67□□□□□ -0.22
NKIRAS2-203ENST00000393879 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
NKIRAS2-203ENST00000393879 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
NKIRAS2-203ENST00000393879 MAP3K1Q13233 1512 aa13.66□□□□□ -0.22
NKIRAS2-203ENST00000393879 MYOM3Q5VTT5 1437 aa13.65□□□□□ -0.22
NKIRAS2-203ENST00000393879 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.22
NKIRAS2-203ENST00000393879 PCF11O94913 1555 aaKnown RBP13.65□□□□□ -0.22
NKIRAS2-203ENST00000393879 FKBP8Q14318 412 aa13.65□□□□□ -0.22
NKIRAS2-203ENST00000393879 LRRIQ1Q96JM4 1722 aa13.65□□□□□ -0.22
NKIRAS2-203ENST00000393879 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
NKIRAS2-203ENST00000393879 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
NKIRAS2-203ENST00000393879 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
NKIRAS2-203ENST00000393879 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
NKIRAS2-203ENST00000393879 NCOA2Q15596 1464 aa13.63□□□□□ -0.23
NKIRAS2-203ENST00000393879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.63□□□□□ -0.23
NKIRAS2-203ENST00000393879 FOXD1Q16676 465 aa13.62□□□□□ -0.23
NKIRAS2-203ENST00000393879 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
NKIRAS2-203ENST00000393879 KDM2AQ9Y2K7 1162 aa13.61□□□□□ -0.23
NKIRAS2-203ENST00000393879 FAM9BQ8IZU0 186 aa13.6□□□□□ -0.23
NKIRAS2-203ENST00000393879 KCNH8Q96L42 1107 aa13.6□□□□□ -0.23
NKIRAS2-203ENST00000393879 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
NKIRAS2-203ENST00000393879 UACAQ9BZF9 1416 aa13.57□□□□□ -0.24
NKIRAS2-203ENST00000393879 IFT140Q96RY7 1462 aa13.56□□□□□ -0.24
NKIRAS2-203ENST00000393879 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
NKIRAS2-203ENST00000393879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.56□□□□□ -0.24
NKIRAS2-203ENST00000393879 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
NKIRAS2-203ENST00000393879 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
NKIRAS2-203ENST00000393879 EHBP1L1Q8N3D4 1523 aa13.55□□□□□ -0.24
NKIRAS2-203ENST00000393879 L3MBTL2Q969R5 705 aa13.53□□□□□ -0.24
NKIRAS2-203ENST00000393879 PKD2Q13563 968 aa13.52□□□□□ -0.24
NKIRAS2-203ENST00000393879 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
NKIRAS2-203ENST00000393879 HFM1A2PYH4 1435 aa13.51□□□□□ -0.25
NKIRAS2-203ENST00000393879 SUPT6HQ7KZ85 1726 aaKnown RBP13.5□□□□□ -0.25
NKIRAS2-203ENST00000393879 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
NKIRAS2-203ENST00000393879 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
NKIRAS2-203ENST00000393879 HECW1Q76N89 1606 aa13.5□□□□□ -0.25
NKIRAS2-203ENST00000393879 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms