RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 PPARGC1BQ86YN6 1023 aaKnown RBP5.99□□□□□ -1.45
CCDC110-202ENST00000393540 PDS5BQ9NTI5 1447 aa5.99□□□□□ -1.45
CCDC110-202ENST00000393540 TARBP1Q13395 1621 aaKnown RBP5.98□□□□□ -1.45
CCDC110-202ENST00000393540 CLIP1P30622 1438 aa5.98□□□□□ -1.45
CCDC110-202ENST00000393540 ARAP1Q96P48 1450 aa5.98□□□□□ -1.45
CCDC110-202ENST00000393540 ABCA5Q8WWZ7 1642 aa5.98□□□□□ -1.45
CCDC110-202ENST00000393540 HRCP23327 699 aa5.97□□□□□ -1.45
CCDC110-202ENST00000393540 CARMIL1Q5VZK9 1371 aa5.96□□□□□ -1.46
CCDC110-202ENST00000393540 OSCARQ8IYS5 282 aa5.95□□□□□ -1.46
CCDC110-202ENST00000393540 VPS8Q8N3P4 1428 aa5.95□□□□□ -1.46
CCDC110-202ENST00000393540 ARHGAP35Q9NRY4 1499 aa5.95□□□□□ -1.46
CCDC110-202ENST00000393540 MRC2Q9UBG0 1479 aa5.94□□□□□ -1.46
CCDC110-202ENST00000393540 DISP3Q9P2K9 1392 aa5.94□□□□□ -1.46
CCDC110-202ENST00000393540 CYB5RLQ6IPT4 315 aa5.94□□□□□ -1.46
CCDC110-202ENST00000393540 WDR62O43379 1518 aa5.93□□□□□ -1.46
CCDC110-202ENST00000393540 CUL7Q14999 1698 aa5.93□□□□□ -1.46
CCDC110-202ENST00000393540 TDRD9Q8NDG6 1382 aaKnown RBP5.93□□□□□ -1.46
CCDC110-202ENST00000393540 TRHP20396 242 aaPredicted RBP5.93□□□□□ -1.46
CCDC110-202ENST00000393540 RANGAP1P46060 587 aaPredicted RBP5.91□□□□□ -1.46
CCDC110-202ENST00000393540 GAPVD1Q14C86 1478 aa5.91□□□□□ -1.46
CCDC110-202ENST00000393540 PBRM1Q86U86 1689 aa5.91□□□□□ -1.46
CCDC110-202ENST00000393540 CTTNBP2Q8WZ74 1663 aa5.91□□□□□ -1.46
CCDC110-202ENST00000393540 ZNF608Q9ULD9 1512 aaPredicted RBP5.9□□□□□ -1.47
CCDC110-202ENST00000393540 AQRO60306 1485 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCDC110-202ENST00000393540 FBLN2P98095 1184 aa5.89□□□□□ -1.47
CCDC110-202ENST00000393540 TTBK1Q5TCY1 1321 aaPredicted RBP5.89□□□□□ -1.47
CCDC110-202ENST00000393540 ADAMTS12P58397 1594 aa5.88□□□□□ -1.47
CCDC110-202ENST00000393540 KANK4Q5T7N3 995 aaPredicted RBP5.88□□□□□ -1.47
CCDC110-202ENST00000393540 IFT140Q96RY7 1462 aa5.87□□□□□ -1.47
CCDC110-202ENST00000393540 SAMD9Q5K651 1589 aa5.86□□□□□ -1.47
CCDC110-202ENST00000393540 EIF4G3O43432 1585 aaKnown RBP5.86□□□□□ -1.47
CCDC110-202ENST00000393540 LRRIQ1Q96JM4 1722 aa5.85□□□□□ -1.47
CCDC110-202ENST00000393540 PCF11O94913 1555 aaKnown RBP5.85□□□□□ -1.47
CCDC110-202ENST00000393540 GRIN2BQ13224 1484 aa5.85□□□□□ -1.47
CCDC110-202ENST00000393540 RIMBP3CA6NJZ7 1639 aa5.85□□□□□ -1.47
CCDC110-202ENST00000393540 RIMBP3BA6NNM3 1639 aa5.85□□□□□ -1.47
CCDC110-202ENST00000393540 RIMBP3Q9UFD9 1639 aa5.85□□□□□ -1.47
CCDC110-202ENST00000393540 KDM6BO15054 1643 aa5.84□□□□□ -1.47
CCDC110-202ENST00000393540 EFCAB5A4FU69 1503 aa5.84□□□□□ -1.47
CCDC110-202ENST00000393540 FHAD1B1AJZ9 1412 aa5.84□□□□□ -1.47
CCDC110-202ENST00000393540 FHOD3Q2V2M9 1422 aa5.84□□□□□ -1.47
CCDC110-202ENST00000393540 TIAM1Q13009 1591 aa5.84□□□□□ -1.47
CCDC110-202ENST00000393540 MAP3K1Q13233 1512 aa5.84□□□□□ -1.47
CCDC110-202ENST00000393540 CFAP43Q8NDM7 1665 aa5.84□□□□□ -1.47
CCDC110-202ENST00000393540 PITPNM2Q9BZ72 1349 aa5.84□□□□□ -1.48
CCDC110-202ENST00000393540 SNAPC4Q5SXM2 1469 aa5.83□□□□□ -1.48
CCDC110-202ENST00000393540 P3H3Q8IVL6 736 aa5.83□□□□□ -1.48
CCDC110-202ENST00000393540 ARHGEF11O15085 1522 aa5.82□□□□□ -1.48
CCDC110-202ENST00000393540 CASKIN1Q8WXD9 1431 aa5.81□□□□□ -1.48
CCDC110-202ENST00000393540 LRRC9Q6ZRR7 1453 aa5.81□□□□□ -1.48
CCDC110-202ENST00000393540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.81□□□□□ -1.48
CCDC110-202ENST00000393540 RRBP1Q9P2E9 1410 aaKnown RBP5.81□□□□□ -1.48
CCDC110-202ENST00000393540 FYCO1Q9BQS8 1478 aa5.8□□□□□ -1.48
CCDC110-202ENST00000393540 IQGAP2Q13576 1575 aa5.8□□□□□ -1.48
CCDC110-202ENST00000393540 CEP170Q5SW79 1584 aa5.8□□□□□ -1.48
CCDC110-202ENST00000393540 GRIN2AQ12879 1464 aa5.8□□□□□ -1.48
CCDC110-202ENST00000393540 UGGT2Q9NYU1 1516 aa5.79□□□□□ -1.48
CCDC110-202ENST00000393540 DISP1Q96F81 1524 aa5.79□□□□□ -1.48
CCDC110-202ENST00000393540 MAGI1Q96QZ7 1491 aaPredicted RBP5.78□□□□□ -1.48
CCDC110-202ENST00000393540 PHLDB1Q86UU1 1377 aa5.78□□□□□ -1.48
CCDC110-202ENST00000393540 APLP2Q06481 763 aa5.78□□□□□ -1.48
CCDC110-202ENST00000393540 MAGI3Q5TCQ9 1506 aa5.78□□□□□ -1.48
CCDC110-202ENST00000393540 KIAA0586Q9BVV6 1533 aa5.77□□□□□ -1.49
CCDC110-202ENST00000393540 SYNJ2O15056 1496 aa5.77□□□□□ -1.49
CCDC110-202ENST00000393540 FMN1Q68DA7 1419 aa5.76□□□□□ -1.49
CCDC110-202ENST00000393540 HNRNPUL2Q1KMD3 747 aaKnown RBP5.76□□□□□ -1.49
CCDC110-202ENST00000393540 KIAA0556O60303 1618 aa5.76□□□□□ -1.49
CCDC110-202ENST00000393540 NUP160Q12769 1436 aa5.76□□□□□ -1.49
CCDC110-202ENST00000393540 ZEB1P37275 1124 aaPredicted RBP5.75□□□□□ -1.49
CCDC110-202ENST00000393540 CCNB3Q8WWL7 1395 aa5.75□□□□□ -1.49
CCDC110-202ENST00000393540 CHD1O14646 1710 aa5.73□□□□□ -1.49
CCDC110-202ENST00000393540 CCER1Q8TC90 406 aaPredicted RBP5.73□□□□□ -1.49
CCDC110-202ENST00000393540 CDK13Q14004 1512 aaKnown RBP5.73□□□□□ -1.49
CCDC110-202ENST00000393540 EPRSP07814 1512 aaKnown RBP5.73□□□□□ -1.49
CCDC110-202ENST00000393540 HECW1Q76N89 1606 aa5.73□□□□□ -1.49
CCDC110-202ENST00000393540 NUP153P49790 1475 aaKnown RBP5.72□□□□□ -1.49
CCDC110-202ENST00000393540 CHMP7Q8WUX9 453 aaPredicted RBP5.72□□□□□ -1.49
CCDC110-202ENST00000393540 ATP1B4Q9UN42 357 aaPredicted RBP5.71□□□□□ -1.49
CCDC110-202ENST00000393540 NCOA2Q15596 1464 aa5.71□□□□□ -1.5
CCDC110-202ENST00000393540 PTPRKQ15262 1439 aa5.71□□□□□ -1.5
CCDC110-202ENST00000393540 DHX57Q6P158 1386 aaKnown RBP5.71□□□□□ -1.5
CCDC110-202ENST00000393540 RAPGEF6Q8TEU7 1601 aa5.71□□□□□ -1.5
CCDC110-202ENST00000393540 EHBP1L1Q8N3D4 1523 aa5.71□□□□□ -1.5
CCDC110-202ENST00000393540 SUPT6HQ7KZ85 1726 aaKnown RBP5.71□□□□□ -1.5
CCDC110-202ENST00000393540 CCDC18Q5T9S5 1454 aa5.7□□□□□ -1.5
CCDC110-202ENST00000393540 FGD6Q6ZV73 1430 aa5.7□□□□□ -1.5
CCDC110-202ENST00000393540 SHROOM2Q13796 1616 aa5.7□□□□□ -1.5
CCDC110-202ENST00000393540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC110-202ENST00000393540 PLB1Q6P1J6 1458 aa5.69□□□□□ -1.5
CCDC110-202ENST00000393540 JPH4Q96JJ6 628 aa5.69□□□□□ -1.5
CCDC110-202ENST00000393540 ABCA8O94911 1581 aa5.69□□□□□ -1.5
CCDC110-202ENST00000393540 MYOM3Q5VTT5 1437 aa5.69□□□□□ -1.5
CCDC110-202ENST00000393540 MTUS2Q5JR59 1369 aa5.68□□□□□ -1.5
CCDC110-202ENST00000393540 TCOF1Q13428 1488 aaKnown RBP5.68□□□□□ -1.5
CCDC110-202ENST00000393540 MAPKBP1O60336 1514 aa5.68□□□□□ -1.5
CCDC110-202ENST00000393540 PTPN23Q9H3S7 1636 aa5.68□□□□□ -1.5
CCDC110-202ENST00000393540 RAB3GAP2Q9H2M9 1393 aa5.67□□□□□ -1.5
CCDC110-202ENST00000393540 ARID3CA6NKF2 412 aa5.67□□□□□ -1.5
CCDC110-202ENST00000393540 ITGAEP38570 1179 aa5.67□□□□□ -1.5
CCDC110-202ENST00000393540 CLASP1Q7Z460 1538 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms