RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 FKBP8Q14318 412 aa14.69□□□□□ -0.06
CASP4-201ENST00000393150 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
CASP4-201ENST00000393150 ARAP1Q96P48 1450 aa14.68□□□□□ -0.06
CASP4-201ENST00000393150 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
CASP4-201ENST00000393150 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.06
CASP4-201ENST00000393150 EIF4G3O43432 1585 aaKnown RBP14.64□□□□□ -0.07
CASP4-201ENST00000393150 PRDM2Q13029 1718 aa14.64□□□□□ -0.07
CASP4-201ENST00000393150 POLA2Q14181 598 aa14.6□□□□□ -0.07
CASP4-201ENST00000393150 CHD1O14646 1710 aa14.59□□□□□ -0.07
CASP4-201ENST00000393150 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
CASP4-201ENST00000393150 DNMBPQ6XZF7 1577 aa14.58□□□□□ -0.08
CASP4-201ENST00000393150 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
CASP4-201ENST00000393150 SOGA1O94964 1423 aa14.54□□□□□ -0.08
CASP4-201ENST00000393150 SYNJ1O43426 1573 aa14.53□□□□□ -0.08
CASP4-201ENST00000393150 TDRD9Q8NDG6 1382 aaKnown RBP14.53□□□□□ -0.08
CASP4-201ENST00000393150 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
CASP4-201ENST00000393150 TARBP1Q13395 1621 aaKnown RBP14.5□□□□□ -0.09
CASP4-201ENST00000393150 ABCB7O75027 752 aa14.49□□□□□ -0.09
CASP4-201ENST00000393150 SNAPC4Q5SXM2 1469 aa14.48□□□□□ -0.09
CASP4-201ENST00000393150 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
CASP4-201ENST00000393150 DSG3P32926 999 aa14.45□□□□□ -0.1
CASP4-201ENST00000393150 RAD54L2Q9Y4B4 1467 aa14.45□□□□□ -0.1
CASP4-201ENST00000393150 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
CASP4-201ENST00000393150 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
CASP4-201ENST00000393150 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
CASP4-201ENST00000393150 CLASP1Q7Z460 1538 aa14.43□□□□□ -0.1
CASP4-201ENST00000393150 SYNJ2O15056 1496 aa14.41□□□□□ -0.1
CASP4-201ENST00000393150 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
CASP4-201ENST00000393150 NPM1P06748 294 aaKnown RBP eCLIP14.35□□□□□ -0.11
CASP4-201ENST00000393150 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
CASP4-201ENST00000393150 POTEHQ6S545 545 aa14.3□□□□□ -0.12
CASP4-201ENST00000393150 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
CASP4-201ENST00000393150 FAM69CQ0P6D2 419 aa14.25□□□□□ -0.13
CASP4-201ENST00000393150 PROM2Q8N271 834 aa14.25□□□□□ -0.13
CASP4-201ENST00000393150 CUX1P39880 1505 aa14.22□□□□□ -0.13
CASP4-201ENST00000393150 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
CASP4-201ENST00000393150 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
CASP4-201ENST00000393150 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
CASP4-201ENST00000393150 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
CASP4-201ENST00000393150 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
CASP4-201ENST00000393150 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
CASP4-201ENST00000393150 CEP170Q5SW79 1584 aa14.15□□□□□ -0.14
CASP4-201ENST00000393150 FHAD1B1AJZ9 1412 aa14.14□□□□□ -0.15
CASP4-201ENST00000393150 NUP160Q12769 1436 aa14.14□□□□□ -0.15
CASP4-201ENST00000393150 PRG4Q92954 1404 aaPredicted RBP14.13□□□□□ -0.15
CASP4-201ENST00000393150 ERCC6L2Q5T890 1561 aa14.12□□□□□ -0.15
CASP4-201ENST00000393150 ABCC10Q5T3U5 1492 aa14.11□□□□□ -0.15
CASP4-201ENST00000393150 KDM4FA0A1W2PPD8 638 aa14.11□□□□□ -0.15
CASP4-201ENST00000393150 ABCA5Q8WWZ7 1642 aa14.1□□□□□ -0.15
CASP4-201ENST00000393150 KIF13AQ9H1H9 1805 aa14.07□□□□□ -0.16
CASP4-201ENST00000393150 ADAMTS12P58397 1594 aa14.05□□□□□ -0.16
CASP4-201ENST00000393150 KDM6BO15054 1643 aa14.05□□□□□ -0.16
CASP4-201ENST00000393150 SHROOM2Q13796 1616 aa14.05□□□□□ -0.16
CASP4-201ENST00000393150 RTN4Q9NQC3 1192 aaKnown RBP14.04□□□□□ -0.16
CASP4-201ENST00000393150 MAPKBP1O60336 1514 aa14.01□□□□□ -0.17
CASP4-201ENST00000393150 ERICH3Q5RHP9 1530 aa14.01□□□□□ -0.17
CASP4-201ENST00000393150 SPDYE2BA6NHP3 402 aa14.01□□□□□ -0.17
CASP4-201ENST00000393150 SPDYE6P0CI01 402 aa14.01□□□□□ -0.17
CASP4-201ENST00000393150 SPDYE2Q495Y8 402 aa14.01□□□□□ -0.17
CASP4-201ENST00000393150 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
CASP4-201ENST00000393150 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
CASP4-201ENST00000393150 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
CASP4-201ENST00000393150 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
CASP4-201ENST00000393150 DIP2BQ9P265 1576 aa13.96□□□□□ -0.17
CASP4-201ENST00000393150 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
CASP4-201ENST00000393150 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
CASP4-201ENST00000393150 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
CASP4-201ENST00000393150 PTPRGP23470 1445 aa13.91□□□□□ -0.18
CASP4-201ENST00000393150 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
CASP4-201ENST00000393150 ADCY10Q96PN6 1610 aa13.88□□□□□ -0.19
CASP4-201ENST00000393150 CARMIL2Q6F5E8 1435 aa13.88□□□□□ -0.19
CASP4-201ENST00000393150 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
CASP4-201ENST00000393150 ADGRL1O94910 1474 aa13.87□□□□□ -0.19
CASP4-201ENST00000393150 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
CASP4-201ENST00000393150 KIAA0586Q9BVV6 1533 aa13.87□□□□□ -0.19
CASP4-201ENST00000393150 BIVM-ERCC5R4GMW8 1640 aa13.85□□□□□ -0.19
CASP4-201ENST00000393150 RUSC2Q8N2Y8 1516 aa13.85□□□□□ -0.19
CASP4-201ENST00000393150 FBXO41Q8TF61 875 aa13.85□□□□□ -0.19
CASP4-201ENST00000393150 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
CASP4-201ENST00000393150 TEX14Q8IWB6 1497 aa13.82□□□□□ -0.2
CASP4-201ENST00000393150 ASXL2Q76L83 1435 aa13.82□□□□□ -0.2
CASP4-201ENST00000393150 ABCC2Q92887 1545 aa13.81□□□□□ -0.2
CASP4-201ENST00000393150 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
CASP4-201ENST00000393150 FAM9AQ8IZU1 332 aaPredicted RBP13.78□□□□□ -0.2
CASP4-201ENST00000393150 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
CASP4-201ENST00000393150 GLI2P10070 1586 aa13.77□□□□□ -0.2
CASP4-201ENST00000393150 IFNLR1Q8IU57 520 aaPredicted RBP13.77□□□□□ -0.21
CASP4-201ENST00000393150 IGF1RP08069 1367 aa13.75□□□□□ -0.21
CASP4-201ENST00000393150 UACAQ9BZF9 1416 aa13.74□□□□□ -0.21
CASP4-201ENST00000393150 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.21
CASP4-201ENST00000393150 CUL7Q14999 1698 aa13.71□□□□□ -0.21
CASP4-201ENST00000393150 UHRF1BP1LA0JNW5 1464 aa13.71□□□□□ -0.22
CASP4-201ENST00000393150 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
CASP4-201ENST00000393150 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
CASP4-201ENST00000393150 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
CASP4-201ENST00000393150 COL17A1Q9UMD9 1497 aaPredicted RBP13.67□□□□□ -0.22
CASP4-201ENST00000393150 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
CASP4-201ENST00000393150 PPRC1Q5VV67 1664 aaKnown RBP13.64□□□□□ -0.23
CASP4-201ENST00000393150 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
CASP4-201ENST00000393150 KDM5BQ9UGL1 1544 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms