RNA–Protein interactions for RNA: ENST00000392894.7

RNF13-203, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-203ENST00000392894 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
RNF13-203ENST00000392894 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
RNF13-203ENST00000392894 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
RNF13-203ENST00000392894 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
RNF13-203ENST00000392894 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
RNF13-203ENST00000392894 MAPKBP1O60336 1514 aa17.73■□□□□ 0.43
RNF13-203ENST00000392894 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
RNF13-203ENST00000392894 CADPSQ9ULU8 1353 aa17.71■□□□□ 0.43
RNF13-203ENST00000392894 ARID3CA6NKF2 412 aa17.71■□□□□ 0.42
RNF13-203ENST00000392894 WDR97A6NE52 1622 aa17.7■□□□□ 0.42
RNF13-203ENST00000392894 LRRC9Q6ZRR7 1453 aa17.69■□□□□ 0.42
RNF13-203ENST00000392894 TIAM1Q13009 1591 aa17.69■□□□□ 0.42
RNF13-203ENST00000392894 FKBP8Q14318 412 aa17.68■□□□□ 0.42
RNF13-203ENST00000392894 TSHZ2Q9NRE2 1034 aa17.64■□□□□ 0.41
RNF13-203ENST00000392894 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
RNF13-203ENST00000392894 NESP48681 1621 aa17.61■□□□□ 0.41
RNF13-203ENST00000392894 PCF11O94913 1555 aaKnown RBP17.61■□□□□ 0.41
RNF13-203ENST00000392894 FANCD2Q9BXW9 1451 aa17.58■□□□□ 0.4
RNF13-203ENST00000392894 PPP1R15AO75807 674 aaPredicted RBP17.57■□□□□ 0.4
RNF13-203ENST00000392894 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
RNF13-203ENST00000392894 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
RNF13-203ENST00000392894 FHAD1B1AJZ9 1412 aa17.56■□□□□ 0.4
RNF13-203ENST00000392894 RRP7BPQ9NSQ0 103 aa17.56■□□□□ 0.4
RNF13-203ENST00000392894 ANP32CO43423 234 aa17.54■□□□□ 0.4
RNF13-203ENST00000392894 IRX6P78412 446 aaPredicted RBP17.53■□□□□ 0.4
RNF13-203ENST00000392894 CNGB1Q14028 1251 aaPredicted RBP17.53■□□□□ 0.4
RNF13-203ENST00000392894 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
RNF13-203ENST00000392894 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
RNF13-203ENST00000392894 FOXD1Q16676 465 aa17.49■□□□□ 0.39
RNF13-203ENST00000392894 PTPRKQ15262 1439 aa17.49■□□□□ 0.39
RNF13-203ENST00000392894 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
RNF13-203ENST00000392894 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
RNF13-203ENST00000392894 NEFLP07196 543 aa17.45■□□□□ 0.38
RNF13-203ENST00000392894 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
RNF13-203ENST00000392894 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
RNF13-203ENST00000392894 MYT1Q01538 1121 aa17.43■□□□□ 0.38
RNF13-203ENST00000392894 MAP3K1Q13233 1512 aa17.43■□□□□ 0.38
RNF13-203ENST00000392894 CCDC18Q5T9S5 1454 aa17.42■□□□□ 0.38
RNF13-203ENST00000392894 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
RNF13-203ENST00000392894 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
RNF13-203ENST00000392894 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
RNF13-203ENST00000392894 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
RNF13-203ENST00000392894 AQRO60306 1485 aaKnown RBP eCLIP17.41■□□□□ 0.38
RNF13-203ENST00000392894 CFAP43Q8NDM7 1665 aa17.39■□□□□ 0.38
RNF13-203ENST00000392894 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
RNF13-203ENST00000392894 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
RNF13-203ENST00000392894 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
RNF13-203ENST00000392894 HSPA5P11021 654 aaKnown RBP17.34■□□□□ 0.37
RNF13-203ENST00000392894 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
RNF13-203ENST00000392894 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
RNF13-203ENST00000392894 NCOA2Q15596 1464 aa17.33■□□□□ 0.37
RNF13-203ENST00000392894 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
RNF13-203ENST00000392894 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
RNF13-203ENST00000392894 NAIPQ13075 1403 aa17.32■□□□□ 0.36
RNF13-203ENST00000392894 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
RNF13-203ENST00000392894 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
RNF13-203ENST00000392894 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
RNF13-203ENST00000392894 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
RNF13-203ENST00000392894 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
RNF13-203ENST00000392894 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
RNF13-203ENST00000392894 UACAQ9BZF9 1416 aa17.29■□□□□ 0.36
RNF13-203ENST00000392894 HFM1A2PYH4 1435 aa17.28■□□□□ 0.36
RNF13-203ENST00000392894 C11orf95C9JLR9 678 aaPredicted RBP17.28■□□□□ 0.36
RNF13-203ENST00000392894 ANP32EQ9BTT0 268 aa17.27■□□□□ 0.36
RNF13-203ENST00000392894 MYOM3Q5VTT5 1437 aa17.27■□□□□ 0.36
RNF13-203ENST00000392894 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.35
RNF13-203ENST00000392894 EFCAB5A4FU69 1503 aa17.26■□□□□ 0.35
RNF13-203ENST00000392894 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
RNF13-203ENST00000392894 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
RNF13-203ENST00000392894 ZNF326Q5BKZ1 582 aaKnown RBP17.26■□□□□ 0.35
RNF13-203ENST00000392894 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
RNF13-203ENST00000392894 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
RNF13-203ENST00000392894 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
RNF13-203ENST00000392894 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
RNF13-203ENST00000392894 MAGI3Q5TCQ9 1506 aa17.23■□□□□ 0.35
RNF13-203ENST00000392894 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF13-203ENST00000392894 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.2■□□□□ 0.34
RNF13-203ENST00000392894 KDM6BO15054 1643 aa17.2■□□□□ 0.34
RNF13-203ENST00000392894 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
RNF13-203ENST00000392894 CUL7Q14999 1698 aa17.19■□□□□ 0.34
RNF13-203ENST00000392894 ZNF777Q9ULD5 760 aaPredicted RBP17.19■□□□□ 0.34
RNF13-203ENST00000392894 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
RNF13-203ENST00000392894 NBPF8Q3BBV2 869 aa17.18■□□□□ 0.34
RNF13-203ENST00000392894 MRS2Q9HD23 443 aa17.16■□□□□ 0.34
RNF13-203ENST00000392894 SLC4A1APQ9BWU0 796 aaKnown RBP17.15■□□□□ 0.34
RNF13-203ENST00000392894 DENND4BO75064 1496 aaPredicted RBP17.15■□□□□ 0.34
RNF13-203ENST00000392894 SUPT6HQ7KZ85 1726 aaKnown RBP17.14■□□□□ 0.33
RNF13-203ENST00000392894 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
RNF13-203ENST00000392894 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
RNF13-203ENST00000392894 FBLN2P98095 1184 aa17.12■□□□□ 0.33
RNF13-203ENST00000392894 PDS5BQ9NTI5 1447 aa17.12■□□□□ 0.33
RNF13-203ENST00000392894 MSH5O43196 834 aa17.11■□□□□ 0.33
RNF13-203ENST00000392894 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
RNF13-203ENST00000392894 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
RNF13-203ENST00000392894 EHBP1L1Q8N3D4 1523 aa17.09■□□□□ 0.33
RNF13-203ENST00000392894 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
RNF13-203ENST00000392894 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
RNF13-203ENST00000392894 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.32
RNF13-203ENST00000392894 EPRSP07814 1512 aaKnown RBP17.07■□□□□ 0.32
RNF13-203ENST00000392894 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms