RNA–Protein interactions for RNA: ENST00000392686.6

KCNMB3-204, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNMB3, Length 2,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-204ENST00000392686 WDR97A6NE52 1622 aa18.87■□□□□ 0.61
KCNMB3-204ENST00000392686 ITGAEP38570 1179 aa18.86■□□□□ 0.61
KCNMB3-204ENST00000392686 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
KCNMB3-204ENST00000392686 PHLDB1Q86UU1 1377 aa18.85■□□□□ 0.61
KCNMB3-204ENST00000392686 PCF11O94913 1555 aaKnown RBP18.83■□□□□ 0.61
KCNMB3-204ENST00000392686 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
KCNMB3-204ENST00000392686 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.6
KCNMB3-204ENST00000392686 KCNH8Q96L42 1107 aa18.8■□□□□ 0.6
KCNMB3-204ENST00000392686 FGD5Q6ZNL6 1462 aa18.79■□□□□ 0.6
KCNMB3-204ENST00000392686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
KCNMB3-204ENST00000392686 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
KCNMB3-204ENST00000392686 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
KCNMB3-204ENST00000392686 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
KCNMB3-204ENST00000392686 CADPSQ9ULU8 1353 aa18.73■□□□□ 0.59
KCNMB3-204ENST00000392686 AQRO60306 1485 aaKnown RBP eCLIP18.73■□□□□ 0.59
KCNMB3-204ENST00000392686 SIN3AQ96ST3 1273 aa18.72■□□□□ 0.59
KCNMB3-204ENST00000392686 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
KCNMB3-204ENST00000392686 CCER2I3L3R5 266 aa18.7■□□□□ 0.58
KCNMB3-204ENST00000392686 ANP32EQ9BTT0 268 aa18.7■□□□□ 0.58
KCNMB3-204ENST00000392686 FAM50AQ14320 339 aaKnown RBP18.7■□□□□ 0.58
KCNMB3-204ENST00000392686 CASKIN1Q8WXD9 1431 aa18.69■□□□□ 0.58
KCNMB3-204ENST00000392686 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
KCNMB3-204ENST00000392686 CTTNBP2Q8WZ74 1663 aa18.65■□□□□ 0.58
KCNMB3-204ENST00000392686 FKBP8Q14318 412 aa18.65■□□□□ 0.58
KCNMB3-204ENST00000392686 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
KCNMB3-204ENST00000392686 CUL7Q14999 1698 aa18.64■□□□□ 0.57
KCNMB3-204ENST00000392686 ABCA10Q8WWZ4 1543 aa18.62■□□□□ 0.57
KCNMB3-204ENST00000392686 FGD6Q6ZV73 1430 aa18.61■□□□□ 0.57
KCNMB3-204ENST00000392686 DNMBPQ6XZF7 1577 aa18.61■□□□□ 0.57
KCNMB3-204ENST00000392686 ANP32CO43423 234 aa18.6■□□□□ 0.57
KCNMB3-204ENST00000392686 BCANQ96GW7 911 aa18.6■□□□□ 0.57
KCNMB3-204ENST00000392686 CCDC18Q5T9S5 1454 aa18.59■□□□□ 0.57
KCNMB3-204ENST00000392686 NEFLP07196 543 aa18.59■□□□□ 0.57
KCNMB3-204ENST00000392686 PTPN23Q9H3S7 1636 aa18.58■□□□□ 0.57
KCNMB3-204ENST00000392686 HFM1A2PYH4 1435 aa18.58■□□□□ 0.56
KCNMB3-204ENST00000392686 SNAPC4Q5SXM2 1469 aa18.57■□□□□ 0.56
KCNMB3-204ENST00000392686 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
KCNMB3-204ENST00000392686 PRKCSHP14314 528 aaPredicted RBP18.57■□□□□ 0.56
KCNMB3-204ENST00000392686 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
KCNMB3-204ENST00000392686 FANCD2Q9BXW9 1451 aa18.56■□□□□ 0.56
KCNMB3-204ENST00000392686 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
KCNMB3-204ENST00000392686 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
KCNMB3-204ENST00000392686 P3H3Q8IVL6 736 aa18.54■□□□□ 0.56
KCNMB3-204ENST00000392686 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
KCNMB3-204ENST00000392686 SAMD9Q5K651 1589 aa18.51■□□□□ 0.55
KCNMB3-204ENST00000392686 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
KCNMB3-204ENST00000392686 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
KCNMB3-204ENST00000392686 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
KCNMB3-204ENST00000392686 TOPBP1Q92547 1522 aa18.5■□□□□ 0.55
KCNMB3-204ENST00000392686 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
KCNMB3-204ENST00000392686 ATP1B4Q9UN42 357 aaPredicted RBP18.5■□□□□ 0.55
KCNMB3-204ENST00000392686 PTPRKQ15262 1439 aa18.5■□□□□ 0.55
KCNMB3-204ENST00000392686 LRRIQ1Q96JM4 1722 aa18.5■□□□□ 0.55
KCNMB3-204ENST00000392686 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
KCNMB3-204ENST00000392686 NAIPQ13075 1403 aa18.48■□□□□ 0.55
KCNMB3-204ENST00000392686 RBM19Q9Y4C8 960 aaKnown RBP18.46■□□□□ 0.55
KCNMB3-204ENST00000392686 SUPT6HQ7KZ85 1726 aaKnown RBP18.46■□□□□ 0.55
KCNMB3-204ENST00000392686 MYOM3Q5VTT5 1437 aa18.46■□□□□ 0.55
KCNMB3-204ENST00000392686 MTUS2Q5JR59 1369 aa18.45■□□□□ 0.54
KCNMB3-204ENST00000392686 EHBP1L1Q8N3D4 1523 aa18.45■□□□□ 0.54
KCNMB3-204ENST00000392686 GRIN2BQ13224 1484 aa18.45■□□□□ 0.54
KCNMB3-204ENST00000392686 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
KCNMB3-204ENST00000392686 KIF21AQ7Z4S6 1674 aa18.44■□□□□ 0.54
KCNMB3-204ENST00000392686 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
KCNMB3-204ENST00000392686 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
KCNMB3-204ENST00000392686 HECW1Q76N89 1606 aa18.42■□□□□ 0.54
KCNMB3-204ENST00000392686 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
KCNMB3-204ENST00000392686 UGGT2Q9NYU1 1516 aa18.4■□□□□ 0.54
KCNMB3-204ENST00000392686 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
KCNMB3-204ENST00000392686 TCOF1Q13428 1488 aaKnown RBP18.37■□□□□ 0.53
KCNMB3-204ENST00000392686 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
KCNMB3-204ENST00000392686 DENND4BO75064 1496 aaPredicted RBP18.32■□□□□ 0.52
KCNMB3-204ENST00000392686 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
KCNMB3-204ENST00000392686 MAGI3Q5TCQ9 1506 aa18.31■□□□□ 0.52
KCNMB3-204ENST00000392686 HNRNPUQ00839 825 aaKnown RBP eCLIP18.3■□□□□ 0.52
KCNMB3-204ENST00000392686 ERICH6BQ5W0A0 696 aa18.3■□□□□ 0.52
KCNMB3-204ENST00000392686 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
KCNMB3-204ENST00000392686 CNTLNQ9NXG0 1405 aa18.3■□□□□ 0.52
KCNMB3-204ENST00000392686 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
KCNMB3-204ENST00000392686 FANCIQ9NVI1 1328 aa18.29■□□□□ 0.52
KCNMB3-204ENST00000392686 HSPA5P11021 654 aaKnown RBP18.28■□□□□ 0.52
KCNMB3-204ENST00000392686 NESP48681 1621 aa18.28■□□□□ 0.52
KCNMB3-204ENST00000392686 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.51
KCNMB3-204ENST00000392686 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.51
KCNMB3-204ENST00000392686 KDM6BO15054 1643 aa18.25■□□□□ 0.51
KCNMB3-204ENST00000392686 MSH5O43196 834 aa18.24■□□□□ 0.51
KCNMB3-204ENST00000392686 NCOA1Q15788 1441 aa18.23■□□□□ 0.51
KCNMB3-204ENST00000392686 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
KCNMB3-204ENST00000392686 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
KCNMB3-204ENST00000392686 CDK11AQ9UQ88 783 aaPredicted RBP18.22■□□□□ 0.51
KCNMB3-204ENST00000392686 POLR1AO95602 1720 aaPredicted RBP18.22■□□□□ 0.51
KCNMB3-204ENST00000392686 TDRD9Q8NDG6 1382 aaKnown RBP18.19■□□□□ 0.5
KCNMB3-204ENST00000392686 RRP7BPQ9NSQ0 103 aa18.19■□□□□ 0.5
KCNMB3-204ENST00000392686 CCDC7Q96M83 1385 aa18.18■□□□□ 0.5
KCNMB3-204ENST00000392686 EPRSP07814 1512 aaKnown RBP18.18■□□□□ 0.5
KCNMB3-204ENST00000392686 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
KCNMB3-204ENST00000392686 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
KCNMB3-204ENST00000392686 TEX14Q8IWB6 1497 aa18.15■□□□□ 0.5
KCNMB3-204ENST00000392686 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.5
KCNMB3-204ENST00000392686 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms