RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 CUX2O14529 1486 aa15.48■□□□□ 0.07
ITSN1-201ENST00000379960 SLC24A1O60721 1099 aa15.48■□□□□ 0.07
ITSN1-201ENST00000379960 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
ITSN1-201ENST00000379960 ITGAEP38570 1179 aa15.47■□□□□ 0.07
ITSN1-201ENST00000379960 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
ITSN1-201ENST00000379960 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
ITSN1-201ENST00000379960 GOLGA3Q08378 1498 aa15.45■□□□□ 0.06
ITSN1-201ENST00000379960 KIF27Q86VH2 1401 aa15.45■□□□□ 0.06
ITSN1-201ENST00000379960 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
ITSN1-201ENST00000379960 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
ITSN1-201ENST00000379960 POLA1P09884 1462 aaPredicted RBP15.43■□□□□ 0.06
ITSN1-201ENST00000379960 CEP162Q5TB80 1403 aa15.42■□□□□ 0.06
ITSN1-201ENST00000379960 FANCIQ9NVI1 1328 aa15.41■□□□□ 0.06
ITSN1-201ENST00000379960 PKNOX2Q96KN3 472 aa15.39■□□□□ 0.05
ITSN1-201ENST00000379960 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
ITSN1-201ENST00000379960 IL27Q8NEV9 243 aa15.38■□□□□ 0.05
ITSN1-201ENST00000379960 KIF21BO75037 1637 aa15.38■□□□□ 0.05
ITSN1-201ENST00000379960 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
ITSN1-201ENST00000379960 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
ITSN1-201ENST00000379960 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
ITSN1-201ENST00000379960 NBR1Q14596 966 aa15.34■□□□□ 0.05
ITSN1-201ENST00000379960 IGF1RP08069 1367 aa15.33■□□□□ 0.04
ITSN1-201ENST00000379960 NEFLP07196 543 aa15.32■□□□□ 0.04
ITSN1-201ENST00000379960 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
ITSN1-201ENST00000379960 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
ITSN1-201ENST00000379960 CLIP1P30622 1438 aa15.28■□□□□ 0.04
ITSN1-201ENST00000379960 CARMIL1Q5VZK9 1371 aa15.28■□□□□ 0.04
ITSN1-201ENST00000379960 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
ITSN1-201ENST00000379960 KCNH8Q96L42 1107 aa15.27■□□□□ 0.04
ITSN1-201ENST00000379960 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
ITSN1-201ENST00000379960 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
ITSN1-201ENST00000379960 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
ITSN1-201ENST00000379960 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
ITSN1-201ENST00000379960 P3H3Q8IVL6 736 aa15.2■□□□□ 0.02
ITSN1-201ENST00000379960 TARBP1Q13395 1621 aaKnown RBP15.2■□□□□ 0.02
ITSN1-201ENST00000379960 PODXL2Q9NZ53 605 aa15.19■□□□□ 0.02
ITSN1-201ENST00000379960 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
ITSN1-201ENST00000379960 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
ITSN1-201ENST00000379960 DAXXQ9UER7 740 aaPredicted RBP15.17■□□□□ 0.02
ITSN1-201ENST00000379960 WDR62O43379 1518 aa15.16■□□□□ 0.02
ITSN1-201ENST00000379960 ABCA5Q8WWZ7 1642 aa15.16■□□□□ 0.02
ITSN1-201ENST00000379960 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
ITSN1-201ENST00000379960 NOP58Q9Y2X3 529 aaKnown RBP15.12■□□□□ 0.01
ITSN1-201ENST00000379960 RTL5Q5HYW3 569 aaPredicted RBP15.11■□□□□ 0.01
ITSN1-201ENST00000379960 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
ITSN1-201ENST00000379960 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
ITSN1-201ENST00000379960 ARAP1Q96P48 1450 aa15.1■□□□□ 0.01
ITSN1-201ENST00000379960 PBRM1Q86U86 1689 aa15.1■□□□□ 0.01
ITSN1-201ENST00000379960 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
ITSN1-201ENST00000379960 CUL7Q14999 1698 aa15.09■□□□□ 0.01
ITSN1-201ENST00000379960 ATP1B4Q9UN42 357 aaPredicted RBP15.09■□□□□ 0.01
ITSN1-201ENST00000379960 FBLN2P98095 1184 aa15.09■□□□□ 0.01
ITSN1-201ENST00000379960 IFT140Q96RY7 1462 aa15.08■□□□□ 0
ITSN1-201ENST00000379960 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0
ITSN1-201ENST00000379960 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
ITSN1-201ENST00000379960 TRIM52Q96A61 297 aa15.03■□□□□ -0
ITSN1-201ENST00000379960 TIMELESSQ9UNS1 1208 aa15.03■□□□□ -0
ITSN1-201ENST00000379960 GRIN2BQ13224 1484 aa15.03■□□□□ -0
ITSN1-201ENST00000379960 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
ITSN1-201ENST00000379960 CTTNBP2Q8WZ74 1663 aa15.01□□□□□ -0.01
ITSN1-201ENST00000379960 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
ITSN1-201ENST00000379960 FHOD3Q2V2M9 1422 aa15.01□□□□□ -0.01
ITSN1-201ENST00000379960 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
ITSN1-201ENST00000379960 FHAD1B1AJZ9 1412 aa14.98□□□□□ -0.01
ITSN1-201ENST00000379960 ADAMTS12P58397 1594 aa14.98□□□□□ -0.01
ITSN1-201ENST00000379960 CHMP7Q8WUX9 453 aaPredicted RBP14.97□□□□□ -0.01
ITSN1-201ENST00000379960 ZMYND15Q9H091 742 aa14.95□□□□□ -0.02
ITSN1-201ENST00000379960 ARID3CA6NKF2 412 aa14.93□□□□□ -0.02
ITSN1-201ENST00000379960 VSIG10Q8N0Z9 540 aa14.92□□□□□ -0.02
ITSN1-201ENST00000379960 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
ITSN1-201ENST00000379960 GLIPR1L2Q4G1C9 344 aa14.9□□□□□ -0.02
ITSN1-201ENST00000379960 PCF11O94913 1555 aaKnown RBP14.88□□□□□ -0.03
ITSN1-201ENST00000379960 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
ITSN1-201ENST00000379960 C11orf95C9JLR9 678 aaPredicted RBP14.86□□□□□ -0.03
ITSN1-201ENST00000379960 IQGAP2Q13576 1575 aa14.86□□□□□ -0.03
ITSN1-201ENST00000379960 WASHC2AQ641Q2 1341 aa14.84□□□□□ -0.03
ITSN1-201ENST00000379960 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
ITSN1-201ENST00000379960 ZBTB47Q9UFB7 747 aaPredicted RBP14.84□□□□□ -0.03
ITSN1-201ENST00000379960 EFCAB5A4FU69 1503 aa14.83□□□□□ -0.04
ITSN1-201ENST00000379960 SYNJ2O15056 1496 aa14.83□□□□□ -0.04
ITSN1-201ENST00000379960 RSPH6AQ9H0K4 717 aa14.83□□□□□ -0.04
ITSN1-201ENST00000379960 IPO9Q96P70 1041 aaKnown RBP14.82□□□□□ -0.04
ITSN1-201ENST00000379960 DDX10Q13206 875 aaKnown RBP14.82□□□□□ -0.04
ITSN1-201ENST00000379960 ANP32AP39687 249 aaKnown RBP14.81□□□□□ -0.04
ITSN1-201ENST00000379960 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
ITSN1-201ENST00000379960 SAMD9Q5K651 1589 aa14.8□□□□□ -0.04
ITSN1-201ENST00000379960 WASHC2CQ9Y4E1 1318 aa14.79□□□□□ -0.04
ITSN1-201ENST00000379960 NEFMP07197 916 aa14.79□□□□□ -0.04
ITSN1-201ENST00000379960 B4GALNT3Q6L9W6 998 aa14.79□□□□□ -0.04
ITSN1-201ENST00000379960 TIAM1Q13009 1591 aa14.78□□□□□ -0.04
ITSN1-201ENST00000379960 PPP4R2Q9NY27 417 aa14.78□□□□□ -0.04
ITSN1-201ENST00000379960 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
ITSN1-201ENST00000379960 KIAA0586Q9BVV6 1533 aa14.77□□□□□ -0.04
ITSN1-201ENST00000379960 A0A0U1RQG5 324 aaPredicted RBP14.77□□□□□ -0.05
ITSN1-201ENST00000379960 LAS1LQ9Y4W2 734 aaKnown RBP14.76□□□□□ -0.05
ITSN1-201ENST00000379960 CHD1O14646 1710 aa14.75□□□□□ -0.05
ITSN1-201ENST00000379960 JPH4Q96JJ6 628 aa14.75□□□□□ -0.05
ITSN1-201ENST00000379960 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
ITSN1-201ENST00000379960 DHX57Q6P158 1386 aaKnown RBP14.74□□□□□ -0.05
ITSN1-201ENST00000379960 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms