RNA–Protein interactions for RNA: ENST00000378886.6

MCM8-203, Transcript of minichromosome maintenance 8 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM8, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM8-203ENST00000378886 CLIP1P30622 1438 aa12.88□□□□□ -0.35
MCM8-203ENST00000378886 MSH5O43196 834 aa12.87□□□□□ -0.35
MCM8-203ENST00000378886 HIRIP3Q9BW71 556 aaPredicted RBP12.87□□□□□ -0.35
MCM8-203ENST00000378886 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
MCM8-203ENST00000378886 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.354e-6■■■□□ 19.1
MCM8-203ENST00000378886 TNIKQ9UKE5 1360 aa12.83□□□□□ -0.36
MCM8-203ENST00000378886 FKBP8Q14318 412 aa12.83□□□□□ -0.36
MCM8-203ENST00000378886 KCNH8Q96L42 1107 aa12.83□□□□□ -0.36
MCM8-203ENST00000378886 SYNJ1O43426 1573 aa12.83□□□□□ -0.36
MCM8-203ENST00000378886 POLR3GLQ9BT43 218 aa12.82□□□□□ -0.36
MCM8-203ENST00000378886 CUX1P39880 1505 aa12.8□□□□□ -0.36
MCM8-203ENST00000378886 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
MCM8-203ENST00000378886 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
MCM8-203ENST00000378886 LAMC3Q9Y6N6 1575 aa12.79□□□□□ -0.36
MCM8-203ENST00000378886 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
MCM8-203ENST00000378886 ZNF777Q9ULD5 760 aaPredicted RBP12.78□□□□□ -0.36
MCM8-203ENST00000378886 IGF1RP08069 1367 aa12.77□□□□□ -0.36
MCM8-203ENST00000378886 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.37
MCM8-203ENST00000378886 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
MCM8-203ENST00000378886 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
MCM8-203ENST00000378886 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
MCM8-203ENST00000378886 ANP32CO43423 234 aa12.75□□□□□ -0.37
MCM8-203ENST00000378886 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
MCM8-203ENST00000378886 URB2Q14146 1524 aaKnown RBP12.71□□□□□ -0.38
MCM8-203ENST00000378886 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
MCM8-203ENST00000378886 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
MCM8-203ENST00000378886 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
MCM8-203ENST00000378886 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
MCM8-203ENST00000378886 DNMBPQ6XZF7 1577 aa12.68□□□□□ -0.38
MCM8-203ENST00000378886 KANK4Q5T7N3 995 aaPredicted RBP12.67□□□□□ -0.38
MCM8-203ENST00000378886 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
MCM8-203ENST00000378886 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
MCM8-203ENST00000378886 CHIC2Q9UKJ5 165 aa12.66□□□□□ -0.38
MCM8-203ENST00000378886 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
MCM8-203ENST00000378886 PLEKHD1A6NEE1 506 aa12.63□□□□□ -0.39
MCM8-203ENST00000378886 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
MCM8-203ENST00000378886 DHX57Q6P158 1386 aaKnown RBP12.63□□□□□ -0.39
MCM8-203ENST00000378886 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
MCM8-203ENST00000378886 HNRNPUQ00839 825 aaKnown RBP eCLIP12.62□□□□□ -0.39
MCM8-203ENST00000378886 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
MCM8-203ENST00000378886 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
MCM8-203ENST00000378886 FHOD3Q2V2M9 1422 aa12.62□□□□□ -0.39
MCM8-203ENST00000378886 DEKP35659 375 aaKnown RBP12.61□□□□□ -0.39
MCM8-203ENST00000378886 FANCIQ9NVI1 1328 aa12.61□□□□□ -0.39
MCM8-203ENST00000378886 CARMIL2Q6F5E8 1435 aa12.57□□□□□ -0.4
MCM8-203ENST00000378886 FHAD1B1AJZ9 1412 aa12.57□□□□□ -0.4
MCM8-203ENST00000378886 CYB5RLQ6IPT4 315 aa12.56□□□□□ -0.4
MCM8-203ENST00000378886 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
MCM8-203ENST00000378886 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
MCM8-203ENST00000378886 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
MCM8-203ENST00000378886 ABCA10Q8WWZ4 1543 aa12.56□□□□□ -0.4
MCM8-203ENST00000378886 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
MCM8-203ENST00000378886 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
MCM8-203ENST00000378886 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
MCM8-203ENST00000378886 SALL2Q9Y467 1007 aaPredicted RBP12.55□□□□□ -0.4
MCM8-203ENST00000378886 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
MCM8-203ENST00000378886 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
MCM8-203ENST00000378886 PRXQ9BXM0 1461 aa12.51□□□□□ -0.41
MCM8-203ENST00000378886 CFDP1Q9UEE9 299 aaPredicted RBP12.5□□□□□ -0.41
MCM8-203ENST00000378886 PTPRGP23470 1445 aa12.48□□□□□ -0.41
MCM8-203ENST00000378886 CCNB3Q8WWL7 1395 aa12.48□□□□□ -0.41
MCM8-203ENST00000378886 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
MCM8-203ENST00000378886 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
MCM8-203ENST00000378886 CCDC136Q96JN2 1154 aa12.47□□□□□ -0.41
MCM8-203ENST00000378886 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
MCM8-203ENST00000378886 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
MCM8-203ENST00000378886 TSPY4P0CV99 314 aa12.46□□□□□ -0.41
MCM8-203ENST00000378886 TSPY10P0CW01 314 aa12.46□□□□□ -0.41
MCM8-203ENST00000378886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.421e-6■■□□□ 13.8
MCM8-203ENST00000378886 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
MCM8-203ENST00000378886 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
MCM8-203ENST00000378886 NBR1Q14596 966 aa12.42□□□□□ -0.42
MCM8-203ENST00000378886 RAB3GAP2Q9H2M9 1393 aa12.42□□□□□ -0.42
MCM8-203ENST00000378886 KIF21BO75037 1637 aa12.41□□□□□ -0.42
MCM8-203ENST00000378886 PPP1R15AO75807 674 aaPredicted RBP12.41□□□□□ -0.42
MCM8-203ENST00000378886 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
MCM8-203ENST00000378886 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
MCM8-203ENST00000378886 MRS2Q9HD23 443 aa12.4□□□□□ -0.42
MCM8-203ENST00000378886 IL27Q8NEV9 243 aa12.39□□□□□ -0.43
MCM8-203ENST00000378886 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
MCM8-203ENST00000378886 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
MCM8-203ENST00000378886 ARAP1Q96P48 1450 aa12.38□□□□□ -0.43
MCM8-203ENST00000378886 NPM2Q86SE8 214 aaKnown RBP12.38□□□□□ -0.43
MCM8-203ENST00000378886 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
MCM8-203ENST00000378886 WDR62O43379 1518 aa12.38□□□□□ -0.43
MCM8-203ENST00000378886 GRIN2AQ12879 1464 aa12.37□□□□□ -0.43
MCM8-203ENST00000378886 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
MCM8-203ENST00000378886 ERICH6BQ5W0A0 696 aa12.35□□□□□ -0.43
MCM8-203ENST00000378886 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
MCM8-203ENST00000378886 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
MCM8-203ENST00000378886 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
MCM8-203ENST00000378886 KIAA0586Q9BVV6 1533 aa12.34□□□□□ -0.43
MCM8-203ENST00000378886 CCER2I3L3R5 266 aa12.34□□□□□ -0.43
MCM8-203ENST00000378886 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
MCM8-203ENST00000378886 MAPKBP1O60336 1514 aa12.33□□□□□ -0.43
MCM8-203ENST00000378886 B4GALNT3Q6L9W6 998 aa12.33□□□□□ -0.44
MCM8-203ENST00000378886 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
MCM8-203ENST00000378886 SETD5Q9C0A6 1442 aa12.32□□□□□ -0.44
MCM8-203ENST00000378886 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
MCM8-203ENST00000378886 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms