RNA–Protein interactions for RNA: ENST00000377191.4

XRN2-201, Transcript of 5'-3' exoribonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRN2, Length 3,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2-201ENST00000377191 KCNH8Q96L42 1107 aa13.32□□□□□ -0.28
XRN2-201ENST00000377191 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
XRN2-201ENST00000377191 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
XRN2-201ENST00000377191 CARMIL1Q5VZK9 1371 aa13.31□□□□□ -0.28
XRN2-201ENST00000377191 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
XRN2-201ENST00000377191 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
XRN2-201ENST00000377191 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
XRN2-201ENST00000377191 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
XRN2-201ENST00000377191 SIN3AQ96ST3 1273 aa13.26□□□□□ -0.29
XRN2-201ENST00000377191 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
XRN2-201ENST00000377191 FAM50AQ14320 339 aaKnown RBP13.25□□□□□ -0.29
XRN2-201ENST00000377191 CADPSQ9ULU8 1353 aa13.24□□□□□ -0.29
XRN2-201ENST00000377191 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
XRN2-201ENST00000377191 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
XRN2-201ENST00000377191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
XRN2-201ENST00000377191 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
XRN2-201ENST00000377191 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
XRN2-201ENST00000377191 AQRO60306 1485 aaKnown RBP eCLIP13.19□□□□□ -0.31e-8■■■■■ 35.2
XRN2-201ENST00000377191 FHOD3Q2V2M9 1422 aa13.19□□□□□ -0.3
XRN2-201ENST00000377191 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
XRN2-201ENST00000377191 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
XRN2-201ENST00000377191 FKBP8Q14318 412 aa13.19□□□□□ -0.3
XRN2-201ENST00000377191 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
XRN2-201ENST00000377191 BCANQ96GW7 911 aa13.17□□□□□ -0.3
XRN2-201ENST00000377191 ANP32EQ9BTT0 268 aa13.17□□□□□ -0.3
XRN2-201ENST00000377191 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
XRN2-201ENST00000377191 CUL7Q14999 1698 aa13.16□□□□□ -0.3
XRN2-201ENST00000377191 ATP1B4Q9UN42 357 aaPredicted RBP13.15□□□□□ -0.3
XRN2-201ENST00000377191 ANP32CO43423 234 aa13.14□□□□□ -0.31
XRN2-201ENST00000377191 ABCA10Q8WWZ4 1543 aa13.14□□□□□ -0.31
XRN2-201ENST00000377191 FGD6Q6ZV73 1430 aa13.14□□□□□ -0.31
XRN2-201ENST00000377191 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
XRN2-201ENST00000377191 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
XRN2-201ENST00000377191 CCDC18Q5T9S5 1454 aa13.13□□□□□ -0.31
XRN2-201ENST00000377191 FANCD2Q9BXW9 1451 aa13.13□□□□□ -0.31
XRN2-201ENST00000377191 NEFLP07196 543 aa13.13□□□□□ -0.31
XRN2-201ENST00000377191 PTPN23Q9H3S7 1636 aa13.11□□□□□ -0.31
XRN2-201ENST00000377191 TONSLQ96HA7 1378 aa13.11□□□□□ -0.31
XRN2-201ENST00000377191 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
XRN2-201ENST00000377191 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
XRN2-201ENST00000377191 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
XRN2-201ENST00000377191 RAD54L2Q9Y4B4 1467 aa13.11□□□□□ -0.31
XRN2-201ENST00000377191 HFM1A2PYH4 1435 aa13.1□□□□□ -0.31
XRN2-201ENST00000377191 SNAPC4Q5SXM2 1469 aa13.1□□□□□ -0.31
XRN2-201ENST00000377191 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
XRN2-201ENST00000377191 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
XRN2-201ENST00000377191 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
XRN2-201ENST00000377191 PTPRKQ15262 1439 aa13.07□□□□□ -0.32
XRN2-201ENST00000377191 SAMD9Q5K651 1589 aa13.06□□□□□ -0.32
XRN2-201ENST00000377191 MTUS2Q5JR59 1369 aa13.06□□□□□ -0.32
XRN2-201ENST00000377191 SUPT6HQ7KZ85 1726 aaKnown RBP13.05□□□□□ -0.32
XRN2-201ENST00000377191 KDM5BQ9UGL1 1544 aa13.05□□□□□ -0.32
XRN2-201ENST00000377191 NAIPQ13075 1403 aa13.05□□□□□ -0.32
XRN2-201ENST00000377191 RBM19Q9Y4C8 960 aaKnown RBP13.04□□□□□ -0.32
XRN2-201ENST00000377191 THOC2Q8NI27 1593 aaKnown RBP13.03□□□□□ -0.32
XRN2-201ENST00000377191 MYOM3Q5VTT5 1437 aa13.03□□□□□ -0.32
XRN2-201ENST00000377191 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
XRN2-201ENST00000377191 GRIN2BQ13224 1484 aa13.01□□□□□ -0.33
XRN2-201ENST00000377191 EHBP1L1Q8N3D4 1523 aa13.01□□□□□ -0.33
XRN2-201ENST00000377191 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
XRN2-201ENST00000377191 GCC2Q8IWJ2 1684 aa13□□□□□ -0.33
XRN2-201ENST00000377191 HECW1Q76N89 1606 aa12.99□□□□□ -0.33
XRN2-201ENST00000377191 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
XRN2-201ENST00000377191 UGGT2Q9NYU1 1516 aa12.98□□□□□ -0.33
XRN2-201ENST00000377191 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
XRN2-201ENST00000377191 NESP48681 1621 aa12.96□□□□□ -0.33
XRN2-201ENST00000377191 HNRNPUQ00839 825 aaKnown RBP eCLIP12.95□□□□□ -0.34
XRN2-201ENST00000377191 TCOF1Q13428 1488 aaKnown RBP12.94□□□□□ -0.34
XRN2-201ENST00000377191 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
XRN2-201ENST00000377191 DENND4BO75064 1496 aaPredicted RBP12.94□□□□□ -0.34
XRN2-201ENST00000377191 WASHC2AQ641Q2 1341 aa12.94□□□□□ -0.34
XRN2-201ENST00000377191 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
XRN2-201ENST00000377191 AKNAQ7Z591 1439 aa12.92□□□□□ -0.34
XRN2-201ENST00000377191 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
XRN2-201ENST00000377191 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
XRN2-201ENST00000377191 KDM6BO15054 1643 aa12.91□□□□□ -0.34
XRN2-201ENST00000377191 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
XRN2-201ENST00000377191 CNTLNQ9NXG0 1405 aa12.9□□□□□ -0.34
XRN2-201ENST00000377191 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
XRN2-201ENST00000377191 RRP7BPQ9NSQ0 103 aa12.9□□□□□ -0.35
XRN2-201ENST00000377191 POLR1AO95602 1720 aaPredicted RBP12.89□□□□□ -0.35
XRN2-201ENST00000377191 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.354e-7■■■□□ 18.2
XRN2-201ENST00000377191 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
XRN2-201ENST00000377191 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
XRN2-201ENST00000377191 MSH5O43196 834 aa12.87□□□□□ -0.35
XRN2-201ENST00000377191 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
XRN2-201ENST00000377191 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
XRN2-201ENST00000377191 CHIC2Q9UKJ5 165 aa12.87□□□□□ -0.35
XRN2-201ENST00000377191 NCOA1Q15788 1441 aa12.85□□□□□ -0.35
XRN2-201ENST00000377191 MIA2Q96PC5 1412 aa12.85□□□□□ -0.35
XRN2-201ENST00000377191 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
XRN2-201ENST00000377191 EPRSP07814 1512 aaKnown RBP12.84□□□□□ -0.35
XRN2-201ENST00000377191 MPHOSPH9Q99550 1183 aa12.84□□□□□ -0.35
XRN2-201ENST00000377191 CCDC7Q96M83 1385 aa12.83□□□□□ -0.35
XRN2-201ENST00000377191 CCDC184Q52MB2 194 aa12.83□□□□□ -0.36
XRN2-201ENST00000377191 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.36
XRN2-201ENST00000377191 PBRM1Q86U86 1689 aa12.83□□□□□ -0.36
XRN2-201ENST00000377191 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
XRN2-201ENST00000377191 TARBP1Q13395 1621 aaKnown RBP12.82□□□□□ -0.36
XRN2-201ENST00000377191 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms