RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
C9orf85-202ENST00000377027 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
C9orf85-202ENST00000377027 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
C9orf85-202ENST00000377027 CHD1O14646 1710 aa17.65■□□□□ 0.42
C9orf85-202ENST00000377027 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
C9orf85-202ENST00000377027 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.41
C9orf85-202ENST00000377027 RAD54L2Q9Y4B4 1467 aa17.6■□□□□ 0.41
C9orf85-202ENST00000377027 CUX1P39880 1505 aa17.58■□□□□ 0.41
C9orf85-202ENST00000377027 ARHGEF11O15085 1522 aa17.57■□□□□ 0.4
C9orf85-202ENST00000377027 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
C9orf85-202ENST00000377027 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
C9orf85-202ENST00000377027 DSG3P32926 999 aa17.51■□□□□ 0.39
C9orf85-202ENST00000377027 SOGA1O94964 1423 aa17.5■□□□□ 0.39
C9orf85-202ENST00000377027 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
C9orf85-202ENST00000377027 SNAPC4Q5SXM2 1469 aa17.46■□□□□ 0.39
C9orf85-202ENST00000377027 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
C9orf85-202ENST00000377027 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
C9orf85-202ENST00000377027 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
C9orf85-202ENST00000377027 ABCB7O75027 752 aa17.42■□□□□ 0.38
C9orf85-202ENST00000377027 POLA2Q14181 598 aa17.39■□□□□ 0.37
C9orf85-202ENST00000377027 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.37
C9orf85-202ENST00000377027 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
C9orf85-202ENST00000377027 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
C9orf85-202ENST00000377027 FBLN2P98095 1184 aa17.36■□□□□ 0.37
C9orf85-202ENST00000377027 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
C9orf85-202ENST00000377027 ABCA10Q8WWZ4 1543 aa17.34■□□□□ 0.37
C9orf85-202ENST00000377027 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
C9orf85-202ENST00000377027 SYNJ2O15056 1496 aa17.32■□□□□ 0.36
C9orf85-202ENST00000377027 CYB5RLQ6IPT4 315 aa17.32■□□□□ 0.36
C9orf85-202ENST00000377027 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
C9orf85-202ENST00000377027 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
C9orf85-202ENST00000377027 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
C9orf85-202ENST00000377027 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
C9orf85-202ENST00000377027 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
C9orf85-202ENST00000377027 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
C9orf85-202ENST00000377027 CEP170Q5SW79 1584 aa17.19■□□□□ 0.34
C9orf85-202ENST00000377027 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
C9orf85-202ENST00000377027 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
C9orf85-202ENST00000377027 NUP160Q12769 1436 aa17.14■□□□□ 0.33
C9orf85-202ENST00000377027 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
C9orf85-202ENST00000377027 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
C9orf85-202ENST00000377027 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.32
C9orf85-202ENST00000377027 ZBTB12Q9Y330 459 aaPredicted RBP17.07■□□□□ 0.32
C9orf85-202ENST00000377027 RUSC2Q8N2Y8 1516 aa17.01■□□□□ 0.31
C9orf85-202ENST00000377027 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
C9orf85-202ENST00000377027 KIF13AQ9H1H9 1805 aa16.92■□□□□ 0.3
C9orf85-202ENST00000377027 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
C9orf85-202ENST00000377027 CUL7Q14999 1698 aa16.88■□□□□ 0.29
C9orf85-202ENST00000377027 IGF1RP08069 1367 aa16.88■□□□□ 0.29
C9orf85-202ENST00000377027 JPH4Q96JJ6 628 aa16.85■□□□□ 0.29
C9orf85-202ENST00000377027 ADCY10Q96PN6 1610 aa16.83■□□□□ 0.28
C9orf85-202ENST00000377027 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
C9orf85-202ENST00000377027 KIAA0586Q9BVV6 1533 aa16.81■□□□□ 0.28
C9orf85-202ENST00000377027 MAPKBP1O60336 1514 aa16.75■□□□□ 0.27
C9orf85-202ENST00000377027 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
C9orf85-202ENST00000377027 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
C9orf85-202ENST00000377027 ABCC10Q5T3U5 1492 aa16.71■□□□□ 0.27
C9orf85-202ENST00000377027 IQGAP2Q13576 1575 aa16.68■□□□□ 0.26
C9orf85-202ENST00000377027 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
C9orf85-202ENST00000377027 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
C9orf85-202ENST00000377027 SPDYE2BA6NHP3 402 aa16.62■□□□□ 0.25
C9orf85-202ENST00000377027 SPDYE6P0CI01 402 aa16.62■□□□□ 0.25
C9orf85-202ENST00000377027 SPDYE2Q495Y8 402 aa16.62■□□□□ 0.25
C9orf85-202ENST00000377027 TSPOAP1O95153 1857 aa16.62■□□□□ 0.25
C9orf85-202ENST00000377027 FAM69CQ0P6D2 419 aa16.61■□□□□ 0.25
C9orf85-202ENST00000377027 PTPRGP23470 1445 aa16.6■□□□□ 0.25
C9orf85-202ENST00000377027 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
C9orf85-202ENST00000377027 PPRC1Q5VV67 1664 aaKnown RBP16.59■□□□□ 0.25
C9orf85-202ENST00000377027 TNIKQ9UKE5 1360 aa16.59■□□□□ 0.25
C9orf85-202ENST00000377027 RAPGEF2Q9Y4G8 1499 aa16.59■□□□□ 0.25
C9orf85-202ENST00000377027 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
C9orf85-202ENST00000377027 KIAA0556O60303 1618 aa16.58■□□□□ 0.24
C9orf85-202ENST00000377027 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
C9orf85-202ENST00000377027 UHRF1BP1LA0JNW5 1464 aa16.56■□□□□ 0.24
C9orf85-202ENST00000377027 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
C9orf85-202ENST00000377027 SPDYE4A6NLX3 237 aa16.55■□□□□ 0.24
C9orf85-202ENST00000377027 NPM1P06748 294 aaKnown RBP eCLIP16.55■□□□□ 0.24
C9orf85-202ENST00000377027 ZNF692Q9BU19 519 aaPredicted RBP16.54■□□□□ 0.24
C9orf85-202ENST00000377027 KDM6BO15054 1643 aa16.54■□□□□ 0.24
C9orf85-202ENST00000377027 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
C9orf85-202ENST00000377027 ASXL2Q76L83 1435 aa16.52■□□□□ 0.23
C9orf85-202ENST00000377027 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.23
C9orf85-202ENST00000377027 GLI2P10070 1586 aa16.51■□□□□ 0.23
C9orf85-202ENST00000377027 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
C9orf85-202ENST00000377027 KDM5BQ9UGL1 1544 aa16.5■□□□□ 0.23
C9orf85-202ENST00000377027 FKBP8Q14318 412 aa16.49■□□□□ 0.23
C9orf85-202ENST00000377027 SSUH2Q9Y2M2 353 aa16.49■□□□□ 0.23
C9orf85-202ENST00000377027 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
C9orf85-202ENST00000377027 MAP3K4Q9Y6R4 1608 aa16.48■□□□□ 0.23
C9orf85-202ENST00000377027 PLB1Q6P1J6 1458 aa16.46■□□□□ 0.23
C9orf85-202ENST00000377027 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
C9orf85-202ENST00000377027 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
C9orf85-202ENST00000377027 ABCA8O94911 1581 aa16.43■□□□□ 0.22
C9orf85-202ENST00000377027 COL17A1Q9UMD9 1497 aaPredicted RBP16.42■□□□□ 0.22
C9orf85-202ENST00000377027 KDM4FA0A1W2PPD8 638 aa16.37■□□□□ 0.21
C9orf85-202ENST00000377027 WDR7Q9Y4E6 1490 aa16.35■□□□□ 0.21
C9orf85-202ENST00000377027 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
C9orf85-202ENST00000377027 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
C9orf85-202ENST00000377027 CFAP43Q8NDM7 1665 aa16.31■□□□□ 0.2
C9orf85-202ENST00000377027 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms