RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 WDR97A6NE52 1622 aa22.47■■□□□ 1.19
SSH3-203ENST00000376757 CUX2O14529 1486 aa22.46■■□□□ 1.19
SSH3-203ENST00000376757 SETD5Q9C0A6 1442 aa22.43■■□□□ 1.18
SSH3-203ENST00000376757 IGF1RP08069 1367 aa22.41■■□□□ 1.18
SSH3-203ENST00000376757 IRX6P78412 446 aaPredicted RBP22.38■■□□□ 1.17
SSH3-203ENST00000376757 ANP32EQ9BTT0 268 aa22.38■■□□□ 1.17
SSH3-203ENST00000376757 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
SSH3-203ENST00000376757 PPP1R15AO75807 674 aaPredicted RBP22.35■■□□□ 1.17
SSH3-203ENST00000376757 NEFLP07196 543 aa22.35■■□□□ 1.17
SSH3-203ENST00000376757 ANP32CO43423 234 aa22.32■■□□□ 1.16
SSH3-203ENST00000376757 LRRC9Q6ZRR7 1453 aa22.31■■□□□ 1.16
SSH3-203ENST00000376757 TIAM1Q13009 1591 aa22.31■■□□□ 1.16
SSH3-203ENST00000376757 FHOD3Q2V2M9 1422 aa22.3■■□□□ 1.16
SSH3-203ENST00000376757 CFTRP13569 1480 aa22.28■■□□□ 1.16
SSH3-203ENST00000376757 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
SSH3-203ENST00000376757 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
SSH3-203ENST00000376757 TONSLQ96HA7 1378 aa22.2■■□□□ 1.14
SSH3-203ENST00000376757 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
SSH3-203ENST00000376757 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
SSH3-203ENST00000376757 CNGB1Q14028 1251 aaPredicted RBP22.19■■□□□ 1.14
SSH3-203ENST00000376757 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
SSH3-203ENST00000376757 CHIC2Q9UKJ5 165 aa22.17■■□□□ 1.14
SSH3-203ENST00000376757 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
SSH3-203ENST00000376757 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
SSH3-203ENST00000376757 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
SSH3-203ENST00000376757 RRP7BPQ9NSQ0 103 aa22.11■■□□□ 1.13
SSH3-203ENST00000376757 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
SSH3-203ENST00000376757 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
SSH3-203ENST00000376757 CCER2I3L3R5 266 aa22.08■■□□□ 1.13
SSH3-203ENST00000376757 CADPSQ9ULU8 1353 aa22.07■■□□□ 1.12
SSH3-203ENST00000376757 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
SSH3-203ENST00000376757 FOXD1Q16676 465 aa22.06■■□□□ 1.12
SSH3-203ENST00000376757 MTUS2Q5JR59 1369 aa22.06■■□□□ 1.12
SSH3-203ENST00000376757 CCDC184Q52MB2 194 aa22.05■■□□□ 1.12
SSH3-203ENST00000376757 MSH5O43196 834 aa22.04■■□□□ 1.12
SSH3-203ENST00000376757 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
SSH3-203ENST00000376757 CCDC18Q5T9S5 1454 aa22.02■■□□□ 1.12
SSH3-203ENST00000376757 FAM9BQ8IZU0 186 aa21.99■■□□□ 1.11
SSH3-203ENST00000376757 AQRO60306 1485 aaKnown RBP eCLIP21.99■■□□□ 1.11
SSH3-203ENST00000376757 MAP3K1Q13233 1512 aa21.99■■□□□ 1.11
SSH3-203ENST00000376757 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
SSH3-203ENST00000376757 HSPA5P11021 654 aaKnown RBP21.98■■□□□ 1.11
SSH3-203ENST00000376757 TIMELESSQ9UNS1 1208 aa21.98■■□□□ 1.11
SSH3-203ENST00000376757 WASHC2AQ641Q2 1341 aa21.95■■□□□ 1.1
SSH3-203ENST00000376757 CFAP43Q8NDM7 1665 aa21.93■■□□□ 1.1
SSH3-203ENST00000376757 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
SSH3-203ENST00000376757 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
SSH3-203ENST00000376757 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
SSH3-203ENST00000376757 POLR3GLQ9BT43 218 aa21.9■■□□□ 1.1
SSH3-203ENST00000376757 NESP48681 1621 aa21.9■■□□□ 1.1
SSH3-203ENST00000376757 C11orf95C9JLR9 678 aaPredicted RBP21.89■■□□□ 1.1
SSH3-203ENST00000376757 B4GALNT3Q6L9W6 998 aa21.89■■□□□ 1.09
SSH3-203ENST00000376757 FYCO1Q9BQS8 1478 aa21.88■■□□□ 1.09
SSH3-203ENST00000376757 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
SSH3-203ENST00000376757 UACAQ9BZF9 1416 aa21.87■■□□□ 1.09
SSH3-203ENST00000376757 NAIPQ13075 1403 aa21.86■■□□□ 1.09
SSH3-203ENST00000376757 ERICH6Q7L0X2 663 aa21.85■■□□□ 1.09
SSH3-203ENST00000376757 POLA1P09884 1462 aaPredicted RBP21.84■■□□□ 1.09
SSH3-203ENST00000376757 HFM1A2PYH4 1435 aa21.83■■□□□ 1.09
SSH3-203ENST00000376757 L3MBTL2Q969R5 705 aa21.82■■□□□ 1.08
SSH3-203ENST00000376757 MRS2Q9HD23 443 aa21.82■■□□□ 1.08
SSH3-203ENST00000376757 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
SSH3-203ENST00000376757 PTPN23Q9H3S7 1636 aa21.81■■□□□ 1.08
SSH3-203ENST00000376757 EIF4G2P78344 907 aaKnown RBP eCLIP21.81■■□□□ 1.08
SSH3-203ENST00000376757 FMN1Q68DA7 1419 aa21.79■■□□□ 1.08
SSH3-203ENST00000376757 ZNF326Q5BKZ1 582 aaKnown RBP21.78■■□□□ 1.08
SSH3-203ENST00000376757 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
SSH3-203ENST00000376757 MYOM3Q5VTT5 1437 aa21.76■■□□□ 1.07
SSH3-203ENST00000376757 TOPBP1Q92547 1522 aa21.75■■□□□ 1.07
SSH3-203ENST00000376757 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
SSH3-203ENST00000376757 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
SSH3-203ENST00000376757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.73■■□□□ 1.07
SSH3-203ENST00000376757 KDM5BQ9UGL1 1544 aa21.73■■□□□ 1.07
SSH3-203ENST00000376757 DNAJC5BQ9UF47 199 aa21.72■■□□□ 1.07
SSH3-203ENST00000376757 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
SSH3-203ENST00000376757 PRKRIP1Q9H875 184 aaPredicted RBP21.72■■□□□ 1.07
SSH3-203ENST00000376757 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
SSH3-203ENST00000376757 EFCAB5A4FU69 1503 aa21.7■■□□□ 1.06
SSH3-203ENST00000376757 KDM6BO15054 1643 aa21.69■■□□□ 1.06
SSH3-203ENST00000376757 LRRIQ1Q96JM4 1722 aa21.68■■□□□ 1.06
SSH3-203ENST00000376757 PPP4R2Q9NY27 417 aa21.67■■□□□ 1.06
SSH3-203ENST00000376757 DENND4BO75064 1496 aaPredicted RBP21.67■■□□□ 1.06
SSH3-203ENST00000376757 ZNF644Q9H582 1327 aaPredicted RBP21.67■■□□□ 1.06
SSH3-203ENST00000376757 CC2D2AQ9P2K1 1620 aa21.67■■□□□ 1.06
SSH3-203ENST00000376757 MAGI3Q5TCQ9 1506 aa21.66■■□□□ 1.06
SSH3-203ENST00000376757 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
SSH3-203ENST00000376757 NBR1Q14596 966 aa21.63■■□□□ 1.05
SSH3-203ENST00000376757 CTTNBP2Q8WZ74 1663 aa21.63■■□□□ 1.05
SSH3-203ENST00000376757 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
SSH3-203ENST00000376757 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
SSH3-203ENST00000376757 FANCIQ9NVI1 1328 aa21.61■■□□□ 1.05
SSH3-203ENST00000376757 SLC4A1APQ9BWU0 796 aaKnown RBP21.61■■□□□ 1.05
SSH3-203ENST00000376757 KIF7Q2M1P5 1343 aa21.6■■□□□ 1.05
SSH3-203ENST00000376757 GRIN2BQ13224 1484 aa21.6■■□□□ 1.05
SSH3-203ENST00000376757 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.05
SSH3-203ENST00000376757 AKNAQ7Z591 1439 aa21.57■■□□□ 1.04
SSH3-203ENST00000376757 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
SSH3-203ENST00000376757 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
SSH3-203ENST00000376757 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
SSH3-203ENST00000376757 SALL2Q9Y467 1007 aaPredicted RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms