RNA–Protein interactions for RNA: ENST00000376286.8

PCCA-203, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2 BASIC

Gene PCCA, Length 2,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-203ENST00000376286 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
PCCA-203ENST00000376286 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
PCCA-203ENST00000376286 CFTRP13569 1480 aa26.39■■□□□ 1.81
PCCA-203ENST00000376286 LRRC9Q6ZRR7 1453 aa26.38■■□□□ 1.81
PCCA-203ENST00000376286 PHLDB1Q86UU1 1377 aa26.37■■□□□ 1.81
PCCA-203ENST00000376286 PPP1R15AO75807 674 aaPredicted RBP26.37■■□□□ 1.81
PCCA-203ENST00000376286 IGF1RP08069 1367 aa26.35■■□□□ 1.81
PCCA-203ENST00000376286 FAM50AQ14320 339 aaKnown RBP26.35■■□□□ 1.81
PCCA-203ENST00000376286 TIMELESSQ9UNS1 1208 aa26.33■■□□□ 1.81
PCCA-203ENST00000376286 NEFLP07196 543 aa26.31■■□□□ 1.8
PCCA-203ENST00000376286 CCER2I3L3R5 266 aa26.28■■□□□ 1.8
PCCA-203ENST00000376286 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.79
PCCA-203ENST00000376286 ANP32CO43423 234 aa26.25■■□□□ 1.79
PCCA-203ENST00000376286 FHAD1B1AJZ9 1412 aa26.25■■□□□ 1.79
PCCA-203ENST00000376286 HIRIP3Q9BW71 556 aaPredicted RBP26.24■■□□□ 1.79
PCCA-203ENST00000376286 TRIM52Q96A61 297 aa26.23■■□□□ 1.79
PCCA-203ENST00000376286 RBM19Q9Y4C8 960 aaKnown RBP26.2■■□□□ 1.78
PCCA-203ENST00000376286 CFAP43Q8NDM7 1665 aa26.19■■□□□ 1.78
PCCA-203ENST00000376286 PCF11O94913 1555 aaKnown RBP26.16■■□□□ 1.78
PCCA-203ENST00000376286 ATP1B4Q9UN42 357 aaPredicted RBP26.15■■□□□ 1.78
PCCA-203ENST00000376286 P3H3Q8IVL6 736 aa26.14■■□□□ 1.77
PCCA-203ENST00000376286 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
PCCA-203ENST00000376286 FGD5Q6ZNL6 1462 aa26.09■■□□□ 1.77
PCCA-203ENST00000376286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.09■■□□□ 1.77
PCCA-203ENST00000376286 TONSLQ96HA7 1378 aa26.08■■□□□ 1.77
PCCA-203ENST00000376286 FHOD3Q2V2M9 1422 aa26.04■■□□□ 1.76
PCCA-203ENST00000376286 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
PCCA-203ENST00000376286 BCL11AQ9H165 835 aa26.02■■□□□ 1.76
PCCA-203ENST00000376286 CADPSQ9ULU8 1353 aa26■■□□□ 1.75
PCCA-203ENST00000376286 CASKIN1Q8WXD9 1431 aa25.99■■□□□ 1.75
PCCA-203ENST00000376286 CCDC18Q5T9S5 1454 aa25.97■■□□□ 1.75
PCCA-203ENST00000376286 FGD6Q6ZV73 1430 aa25.96■■□□□ 1.75
PCCA-203ENST00000376286 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.75
PCCA-203ENST00000376286 EFCAB5A4FU69 1503 aa25.95■■□□□ 1.74
PCCA-203ENST00000376286 UACAQ9BZF9 1416 aa25.94■■□□□ 1.74
PCCA-203ENST00000376286 HFM1A2PYH4 1435 aa25.91■■□□□ 1.74
PCCA-203ENST00000376286 HNRNPUQ00839 825 aaKnown RBP eCLIP25.9■■□□□ 1.74
PCCA-203ENST00000376286 PTPRKQ15262 1439 aa25.87■■□□□ 1.73
PCCA-203ENST00000376286 MSH5O43196 834 aa25.86■■□□□ 1.73
PCCA-203ENST00000376286 PTPN23Q9H3S7 1636 aa25.86■■□□□ 1.73
PCCA-203ENST00000376286 FMN1Q68DA7 1419 aa25.84■■□□□ 1.73
PCCA-203ENST00000376286 MTUS2Q5JR59 1369 aa25.84■■□□□ 1.73
PCCA-203ENST00000376286 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
PCCA-203ENST00000376286 IRX6P78412 446 aaPredicted RBP25.81■■□□□ 1.72
PCCA-203ENST00000376286 NAIPQ13075 1403 aa25.81■■□□□ 1.72
PCCA-203ENST00000376286 FANCIQ9NVI1 1328 aa25.8■■□□□ 1.72
PCCA-203ENST00000376286 KDM5BQ9UGL1 1544 aa25.79■■□□□ 1.72
PCCA-203ENST00000376286 SNAPC4Q5SXM2 1469 aa25.78■■□□□ 1.72
PCCA-203ENST00000376286 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
PCCA-203ENST00000376286 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
PCCA-203ENST00000376286 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
PCCA-203ENST00000376286 CTTNBP2Q8WZ74 1663 aa25.75■■□□□ 1.71
PCCA-203ENST00000376286 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
PCCA-203ENST00000376286 WASHC2AQ641Q2 1341 aa25.74■■□□□ 1.71
PCCA-203ENST00000376286 MYOM3Q5VTT5 1437 aa25.73■■□□□ 1.71
PCCA-203ENST00000376286 CUL7Q14999 1698 aa25.73■■□□□ 1.71
PCCA-203ENST00000376286 HSPA5P11021 654 aaKnown RBP25.72■■□□□ 1.71
PCCA-203ENST00000376286 NCOA2Q15596 1464 aa25.72■■□□□ 1.71
PCCA-203ENST00000376286 ERICH6BQ5W0A0 696 aa25.71■■□□□ 1.71
PCCA-203ENST00000376286 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.7
PCCA-203ENST00000376286 POLA1P09884 1462 aaPredicted RBP25.69■■□□□ 1.7
PCCA-203ENST00000376286 ERICH6Q7L0X2 663 aa25.68■■□□□ 1.7
PCCA-203ENST00000376286 PPP4R2Q9NY27 417 aa25.64■■□□□ 1.7
PCCA-203ENST00000376286 TOPBP1Q92547 1522 aa25.64■■□□□ 1.7
PCCA-203ENST00000376286 EIF4G2P78344 907 aaKnown RBP eCLIP25.64■■□□□ 1.69
PCCA-203ENST00000376286 CNTLNQ9NXG0 1405 aa25.62■■□□□ 1.69
PCCA-203ENST00000376286 SUPT6HQ7KZ85 1726 aaKnown RBP25.62■■□□□ 1.69
PCCA-203ENST00000376286 LRRIQ1Q96JM4 1722 aa25.61■■□□□ 1.69
PCCA-203ENST00000376286 RRP7BPQ9NSQ0 103 aa25.61■■□□□ 1.69
PCCA-203ENST00000376286 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
PCCA-203ENST00000376286 EHBP1L1Q8N3D4 1523 aa25.6■■□□□ 1.69
PCCA-203ENST00000376286 SAMD9Q5K651 1589 aa25.59■■□□□ 1.69
PCCA-203ENST00000376286 CCDC184Q52MB2 194 aa25.59■■□□□ 1.69
PCCA-203ENST00000376286 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
PCCA-203ENST00000376286 CHIC2Q9UKJ5 165 aa25.56■■□□□ 1.68
PCCA-203ENST00000376286 DENND4BO75064 1496 aaPredicted RBP25.56■■□□□ 1.68
PCCA-203ENST00000376286 UGGT2Q9NYU1 1516 aa25.55■■□□□ 1.68
PCCA-203ENST00000376286 HECW1Q76N89 1606 aa25.55■■□□□ 1.68
PCCA-203ENST00000376286 PRKRIP1Q9H875 184 aaPredicted RBP25.54■■□□□ 1.68
PCCA-203ENST00000376286 FAM9BQ8IZU0 186 aa25.53■■□□□ 1.68
PCCA-203ENST00000376286 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
PCCA-203ENST00000376286 GCC2Q8IWJ2 1684 aa25.51■■□□□ 1.67
PCCA-203ENST00000376286 MRS2Q9HD23 443 aa25.51■■□□□ 1.67
PCCA-203ENST00000376286 CCDC7Q96M83 1385 aa25.5■■□□□ 1.67
PCCA-203ENST00000376286 ZBED9Q6R2W3 1325 aa25.5■■□□□ 1.67
PCCA-203ENST00000376286 NCOA1Q15788 1441 aa25.5■■□□□ 1.67
PCCA-203ENST00000376286 C11orf95C9JLR9 678 aaPredicted RBP25.49■■□□□ 1.67
PCCA-203ENST00000376286 L3MBTL2Q969R5 705 aa25.49■■□□□ 1.67
PCCA-203ENST00000376286 TCOF1Q13428 1488 aaKnown RBP25.49■■□□□ 1.67
PCCA-203ENST00000376286 B4GALNT3Q6L9W6 998 aa25.48■■□□□ 1.67
PCCA-203ENST00000376286 AKNAQ7Z591 1439 aa25.48■■□□□ 1.67
PCCA-203ENST00000376286 MPHOSPH9Q99550 1183 aa25.47■■□□□ 1.67
PCCA-203ENST00000376286 MAGI3Q5TCQ9 1506 aa25.47■■□□□ 1.67
PCCA-203ENST00000376286 KDM6BO15054 1643 aa25.45■■□□□ 1.66
PCCA-203ENST00000376286 TDRD9Q8NDG6 1382 aaKnown RBP25.42■■□□□ 1.66
PCCA-203ENST00000376286 MYT1LQ9UL68 1186 aa25.41■■□□□ 1.66
PCCA-203ENST00000376286 NESP48681 1621 aa25.4■■□□□ 1.66
PCCA-203ENST00000376286 FOXD1Q16676 465 aa25.4■■□□□ 1.66
PCCA-203ENST00000376286 ABCA5Q8WWZ7 1642 aa25.38■■□□□ 1.65
PCCA-203ENST00000376286 GAPVD1Q14C86 1478 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms