RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 CC2D2AQ9P2K1 1620 aa16.49■□□□□ 0.23
PTPN20-204ENST00000374346 SETD5Q9C0A6 1442 aa16.49■□□□□ 0.23
PTPN20-204ENST00000374346 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
PTPN20-204ENST00000374346 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
PTPN20-204ENST00000374346 PCF11O94913 1555 aaKnown RBP16.45■□□□□ 0.22
PTPN20-204ENST00000374346 CUL7Q14999 1698 aa16.45■□□□□ 0.22
PTPN20-204ENST00000374346 ABCA10Q8WWZ4 1543 aa16.44■□□□□ 0.22
PTPN20-204ENST00000374346 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
PTPN20-204ENST00000374346 FYCO1Q9BQS8 1478 aa16.43■□□□□ 0.22
PTPN20-204ENST00000374346 MAPKBP1O60336 1514 aa16.43■□□□□ 0.22
PTPN20-204ENST00000374346 FAM50AQ14320 339 aaKnown RBP16.42■□□□□ 0.22
PTPN20-204ENST00000374346 CTTNBP2Q8WZ74 1663 aa16.41■□□□□ 0.22
PTPN20-204ENST00000374346 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
PTPN20-204ENST00000374346 TOPBP1Q92547 1522 aa16.4■□□□□ 0.22
PTPN20-204ENST00000374346 ATP1B4Q9UN42 357 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-204ENST00000374346 TIMELESSQ9UNS1 1208 aa16.39■□□□□ 0.21
PTPN20-204ENST00000374346 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
PTPN20-204ENST00000374346 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-204ENST00000374346 MYT1Q01538 1121 aa16.39■□□□□ 0.21
PTPN20-204ENST00000374346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN20-204ENST00000374346 P3H3Q8IVL6 736 aa16.37■□□□□ 0.21
PTPN20-204ENST00000374346 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
PTPN20-204ENST00000374346 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
PTPN20-204ENST00000374346 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
PTPN20-204ENST00000374346 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
PTPN20-204ENST00000374346 WDR97A6NE52 1622 aa16.29■□□□□ 0.2
PTPN20-204ENST00000374346 NESP48681 1621 aa16.26■□□□□ 0.19
PTPN20-204ENST00000374346 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
PTPN20-204ENST00000374346 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
PTPN20-204ENST00000374346 SIN3AQ96ST3 1273 aa16.26■□□□□ 0.19
PTPN20-204ENST00000374346 SUPT16HQ9Y5B9 1047 aaKnown RBP16.25■□□□□ 0.19
PTPN20-204ENST00000374346 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
PTPN20-204ENST00000374346 SAMD9Q5K651 1589 aa16.23■□□□□ 0.19
PTPN20-204ENST00000374346 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
PTPN20-204ENST00000374346 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
PTPN20-204ENST00000374346 URB2Q14146 1524 aaKnown RBP16.21■□□□□ 0.19
PTPN20-204ENST00000374346 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.18
PTPN20-204ENST00000374346 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
PTPN20-204ENST00000374346 CCDC18Q5T9S5 1454 aa16.2■□□□□ 0.18
PTPN20-204ENST00000374346 KIF21AQ7Z4S6 1674 aa16.2■□□□□ 0.18
PTPN20-204ENST00000374346 DDX10Q13206 875 aaKnown RBP16.2■□□□□ 0.18
PTPN20-204ENST00000374346 SUPT6HQ7KZ85 1726 aaKnown RBP16.19■□□□□ 0.18
PTPN20-204ENST00000374346 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
PTPN20-204ENST00000374346 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
PTPN20-204ENST00000374346 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
PTPN20-204ENST00000374346 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
PTPN20-204ENST00000374346 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
PTPN20-204ENST00000374346 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
PTPN20-204ENST00000374346 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
PTPN20-204ENST00000374346 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
PTPN20-204ENST00000374346 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
PTPN20-204ENST00000374346 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
PTPN20-204ENST00000374346 LRRIQ1Q96JM4 1722 aa16.15■□□□□ 0.18
PTPN20-204ENST00000374346 ANP32CO43423 234 aa16.13■□□□□ 0.17
PTPN20-204ENST00000374346 CCER2I3L3R5 266 aa16.13■□□□□ 0.17
PTPN20-204ENST00000374346 KCNH8Q96L42 1107 aa16.11■□□□□ 0.17
PTPN20-204ENST00000374346 NAIPQ13075 1403 aa16.1■□□□□ 0.17
PTPN20-204ENST00000374346 UGGT2Q9NYU1 1516 aa16.09■□□□□ 0.17
PTPN20-204ENST00000374346 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
PTPN20-204ENST00000374346 HECW1Q76N89 1606 aa16.08■□□□□ 0.16
PTPN20-204ENST00000374346 ARHGEF11O15085 1522 aa16.06■□□□□ 0.16
PTPN20-204ENST00000374346 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
PTPN20-204ENST00000374346 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
PTPN20-204ENST00000374346 HIRIP3Q9BW71 556 aaPredicted RBP16.04■□□□□ 0.16
PTPN20-204ENST00000374346 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
PTPN20-204ENST00000374346 NEFLP07196 543 aa16.03■□□□□ 0.16
PTPN20-204ENST00000374346 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
PTPN20-204ENST00000374346 IQGAP2Q13576 1575 aa16.02■□□□□ 0.16
PTPN20-204ENST00000374346 AKNAQ7Z591 1439 aa16.02■□□□□ 0.16
PTPN20-204ENST00000374346 MIA2Q96PC5 1412 aa16■□□□□ 0.15
PTPN20-204ENST00000374346 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
PTPN20-204ENST00000374346 MAGI3Q5TCQ9 1506 aa15.99■□□□□ 0.15
PTPN20-204ENST00000374346 FKBP8Q14318 412 aa15.97■□□□□ 0.15
PTPN20-204ENST00000374346 ADAMTS12P58397 1594 aa15.97■□□□□ 0.15
PTPN20-204ENST00000374346 RRP7BPQ9NSQ0 103 aa15.96■□□□□ 0.15
PTPN20-204ENST00000374346 TRIM52Q96A61 297 aa15.95■□□□□ 0.14
PTPN20-204ENST00000374346 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
PTPN20-204ENST00000374346 CHIC2Q9UKJ5 165 aa15.93■□□□□ 0.14
PTPN20-204ENST00000374346 WDR62O43379 1518 aa15.93■□□□□ 0.14
PTPN20-204ENST00000374346 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
PTPN20-204ENST00000374346 BCANQ96GW7 911 aa15.9■□□□□ 0.14
PTPN20-204ENST00000374346 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
PTPN20-204ENST00000374346 EIF4G2P78344 907 aaKnown RBP eCLIP15.9■□□□□ 0.14
PTPN20-204ENST00000374346 CDK13Q14004 1512 aaKnown RBP15.9■□□□□ 0.14
PTPN20-204ENST00000374346 MPHOSPH9Q99550 1183 aa15.89■□□□□ 0.13
PTPN20-204ENST00000374346 ROCK1Q13464 1354 aa15.88■□□□□ 0.13
PTPN20-204ENST00000374346 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
PTPN20-204ENST00000374346 CDK11AQ9UQ88 783 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-204ENST00000374346 DENND4BO75064 1496 aaPredicted RBP15.85■□□□□ 0.13
PTPN20-204ENST00000374346 KDM6BO15054 1643 aa15.85■□□□□ 0.13
PTPN20-204ENST00000374346 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
PTPN20-204ENST00000374346 WASHC2AQ641Q2 1341 aa15.84■□□□□ 0.13
PTPN20-204ENST00000374346 DAPK1P53355 1430 aa15.84■□□□□ 0.13
PTPN20-204ENST00000374346 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
PTPN20-204ENST00000374346 DNMT1P26358 1616 aaKnown RBP15.84■□□□□ 0.13
PTPN20-204ENST00000374346 KIAA0556O60303 1618 aa15.83■□□□□ 0.13
PTPN20-204ENST00000374346 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
PTPN20-204ENST00000374346 HNRNPUQ00839 825 aaKnown RBP eCLIP15.82■□□□□ 0.12
PTPN20-204ENST00000374346 L3MBTL2Q969R5 705 aa15.81■□□□□ 0.12
PTPN20-204ENST00000374346 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms