RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 IGF1RP08069 1367 aa16.67■□□□□ 0.26
PACSIN1-202ENST00000374043 FHOD3Q2V2M9 1422 aa16.67■□□□□ 0.26
PACSIN1-202ENST00000374043 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
PACSIN1-202ENST00000374043 KIF21BO75037 1637 aa16.61■□□□□ 0.25
PACSIN1-202ENST00000374043 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
PACSIN1-202ENST00000374043 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
PACSIN1-202ENST00000374043 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
PACSIN1-202ENST00000374043 NESP48681 1621 aa16.59■□□□□ 0.25
PACSIN1-202ENST00000374043 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
PACSIN1-202ENST00000374043 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.25
PACSIN1-202ENST00000374043 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
PACSIN1-202ENST00000374043 FOXD1Q16676 465 aa16.57■□□□□ 0.24
PACSIN1-202ENST00000374043 CUX1P39880 1505 aa16.56■□□□□ 0.24
PACSIN1-202ENST00000374043 DHX57Q6P158 1386 aaKnown RBP16.54■□□□□ 0.24
PACSIN1-202ENST00000374043 CFTRP13569 1480 aa16.54■□□□□ 0.24
PACSIN1-202ENST00000374043 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
PACSIN1-202ENST00000374043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
PACSIN1-202ENST00000374043 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
PACSIN1-202ENST00000374043 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
PACSIN1-202ENST00000374043 FKBP8Q14318 412 aa16.5■□□□□ 0.23
PACSIN1-202ENST00000374043 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
PACSIN1-202ENST00000374043 SETD5Q9C0A6 1442 aa16.49■□□□□ 0.23
PACSIN1-202ENST00000374043 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
PACSIN1-202ENST00000374043 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
PACSIN1-202ENST00000374043 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
PACSIN1-202ENST00000374043 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
PACSIN1-202ENST00000374043 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
PACSIN1-202ENST00000374043 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.23
PACSIN1-202ENST00000374043 IRX6P78412 446 aaPredicted RBP16.44■□□□□ 0.22
PACSIN1-202ENST00000374043 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
PACSIN1-202ENST00000374043 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
PACSIN1-202ENST00000374043 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
PACSIN1-202ENST00000374043 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
PACSIN1-202ENST00000374043 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
PACSIN1-202ENST00000374043 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
PACSIN1-202ENST00000374043 SALL2Q9Y467 1007 aaPredicted RBP16.38■□□□□ 0.21
PACSIN1-202ENST00000374043 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
PACSIN1-202ENST00000374043 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
PACSIN1-202ENST00000374043 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
PACSIN1-202ENST00000374043 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
PACSIN1-202ENST00000374043 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
PACSIN1-202ENST00000374043 RGL3Q3MIN7 710 aa16.36■□□□□ 0.21
PACSIN1-202ENST00000374043 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.21
PACSIN1-202ENST00000374043 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
PACSIN1-202ENST00000374043 FMN1Q68DA7 1419 aa16.34■□□□□ 0.21
PACSIN1-202ENST00000374043 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
PACSIN1-202ENST00000374043 PPP1R15AO75807 674 aaPredicted RBP16.32■□□□□ 0.2
PACSIN1-202ENST00000374043 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
PACSIN1-202ENST00000374043 GAPVD1Q14C86 1478 aa16.31■□□□□ 0.2
PACSIN1-202ENST00000374043 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
PACSIN1-202ENST00000374043 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
PACSIN1-202ENST00000374043 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
PACSIN1-202ENST00000374043 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.2
PACSIN1-202ENST00000374043 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
PACSIN1-202ENST00000374043 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
PACSIN1-202ENST00000374043 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
PACSIN1-202ENST00000374043 L3MBTL2Q969R5 705 aa16.24■□□□□ 0.19
PACSIN1-202ENST00000374043 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
PACSIN1-202ENST00000374043 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
PACSIN1-202ENST00000374043 JPH4Q96JJ6 628 aa16.22■□□□□ 0.19
PACSIN1-202ENST00000374043 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
PACSIN1-202ENST00000374043 PKD2Q13563 968 aa16.2■□□□□ 0.18
PACSIN1-202ENST00000374043 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
PACSIN1-202ENST00000374043 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
PACSIN1-202ENST00000374043 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
PACSIN1-202ENST00000374043 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
PACSIN1-202ENST00000374043 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
PACSIN1-202ENST00000374043 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
PACSIN1-202ENST00000374043 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
PACSIN1-202ENST00000374043 CASKIN1Q8WXD9 1431 aa16.12■□□□□ 0.17
PACSIN1-202ENST00000374043 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
PACSIN1-202ENST00000374043 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
PACSIN1-202ENST00000374043 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
PACSIN1-202ENST00000374043 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
PACSIN1-202ENST00000374043 NUP155O75694 1391 aa16.07■□□□□ 0.16
PACSIN1-202ENST00000374043 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
PACSIN1-202ENST00000374043 DNMBPQ6XZF7 1577 aa16.06■□□□□ 0.16
PACSIN1-202ENST00000374043 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
PACSIN1-202ENST00000374043 PCF11O94913 1555 aaKnown RBP16.04■□□□□ 0.16
PACSIN1-202ENST00000374043 CARMIL2Q6F5E8 1435 aa16.03■□□□□ 0.16
PACSIN1-202ENST00000374043 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
PACSIN1-202ENST00000374043 FYCO1Q9BQS8 1478 aa16.02■□□□□ 0.15
PACSIN1-202ENST00000374043 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
PACSIN1-202ENST00000374043 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
PACSIN1-202ENST00000374043 CCER2I3L3R5 266 aa15.98■□□□□ 0.15
PACSIN1-202ENST00000374043 CDK13Q14004 1512 aaKnown RBP15.98■□□□□ 0.15
PACSIN1-202ENST00000374043 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
PACSIN1-202ENST00000374043 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
PACSIN1-202ENST00000374043 GRIN2BQ13224 1484 aa15.96■□□□□ 0.15
PACSIN1-202ENST00000374043 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
PACSIN1-202ENST00000374043 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
PACSIN1-202ENST00000374043 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
PACSIN1-202ENST00000374043 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
PACSIN1-202ENST00000374043 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
PACSIN1-202ENST00000374043 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
PACSIN1-202ENST00000374043 NBPF8Q3BBV2 869 aa15.93■□□□□ 0.14
PACSIN1-202ENST00000374043 CCDC136Q96JN2 1154 aa15.93■□□□□ 0.14
PACSIN1-202ENST00000374043 PTPRKQ15262 1439 aa15.93■□□□□ 0.14
PACSIN1-202ENST00000374043 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
PACSIN1-202ENST00000374043 PTPRGP23470 1445 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms