RNA–Protein interactions for RNA: ENST00000373826.3

RAB42-201, Transcript of RAB42, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB42, Length 1,950 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42-201ENST00000373826 CCER2I3L3R5 266 aa18.86■□□□□ 0.61
RAB42-201ENST00000373826 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
RAB42-201ENST00000373826 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.61
RAB42-201ENST00000373826 DDX10Q13206 875 aaKnown RBP18.81■□□□□ 0.6
RAB42-201ENST00000373826 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
RAB42-201ENST00000373826 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
RAB42-201ENST00000373826 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
RAB42-201ENST00000373826 IGF1RP08069 1367 aa18.78■□□□□ 0.6
RAB42-201ENST00000373826 CADPSQ9ULU8 1353 aa18.74■□□□□ 0.59
RAB42-201ENST00000373826 ANP32CO43423 234 aa18.73■□□□□ 0.59
RAB42-201ENST00000373826 ITGAEP38570 1179 aa18.73■□□□□ 0.59
RAB42-201ENST00000373826 FANCIQ9NVI1 1328 aa18.73■□□□□ 0.59
RAB42-201ENST00000373826 TIAM1Q13009 1591 aa18.71■□□□□ 0.59
RAB42-201ENST00000373826 FGD5Q6ZNL6 1462 aa18.7■□□□□ 0.58
RAB42-201ENST00000373826 MSH5O43196 834 aa18.69■□□□□ 0.58
RAB42-201ENST00000373826 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
RAB42-201ENST00000373826 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
RAB42-201ENST00000373826 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
RAB42-201ENST00000373826 LRRC9Q6ZRR7 1453 aa18.64■□□□□ 0.57
RAB42-201ENST00000373826 MYT1LQ9UL68 1186 aa18.62■□□□□ 0.57
RAB42-201ENST00000373826 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
RAB42-201ENST00000373826 CFAP43Q8NDM7 1665 aa18.6■□□□□ 0.57
RAB42-201ENST00000373826 PHLDB1Q86UU1 1377 aa18.59■□□□□ 0.57
RAB42-201ENST00000373826 ERICH6BQ5W0A0 696 aa18.59■□□□□ 0.57
RAB42-201ENST00000373826 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.57
RAB42-201ENST00000373826 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
RAB42-201ENST00000373826 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.56■□□□□ 0.56
RAB42-201ENST00000373826 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
RAB42-201ENST00000373826 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
RAB42-201ENST00000373826 PCF11O94913 1555 aaKnown RBP18.54■□□□□ 0.56
RAB42-201ENST00000373826 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
RAB42-201ENST00000373826 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
RAB42-201ENST00000373826 FAM50AQ14320 339 aaKnown RBP18.52■□□□□ 0.56
RAB42-201ENST00000373826 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
RAB42-201ENST00000373826 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
RAB42-201ENST00000373826 TONSLQ96HA7 1378 aa18.49■□□□□ 0.55
RAB42-201ENST00000373826 CUL7Q14999 1698 aa18.47■□□□□ 0.55
RAB42-201ENST00000373826 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.555e-11■■■■■ 56.6
RAB42-201ENST00000373826 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
RAB42-201ENST00000373826 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
RAB42-201ENST00000373826 POLA1P09884 1462 aaPredicted RBP18.47■□□□□ 0.55
RAB42-201ENST00000373826 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
RAB42-201ENST00000373826 HNRNPUQ00839 825 aaKnown RBP eCLIP18.46■□□□□ 0.55
RAB42-201ENST00000373826 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
RAB42-201ENST00000373826 CASKIN1Q8WXD9 1431 aa18.44■□□□□ 0.54
RAB42-201ENST00000373826 FHOD3Q2V2M9 1422 aa18.44■□□□□ 0.54
RAB42-201ENST00000373826 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
RAB42-201ENST00000373826 P3H3Q8IVL6 736 aa18.42■□□□□ 0.54
RAB42-201ENST00000373826 UACAQ9BZF9 1416 aa18.39■□□□□ 0.53
RAB42-201ENST00000373826 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
RAB42-201ENST00000373826 CCDC18Q5T9S5 1454 aa18.37■□□□□ 0.53
RAB42-201ENST00000373826 NESP48681 1621 aa18.36■□□□□ 0.53
RAB42-201ENST00000373826 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
RAB42-201ENST00000373826 DEKP35659 375 aaKnown RBP18.34■□□□□ 0.53
RAB42-201ENST00000373826 KDM5BQ9UGL1 1544 aa18.34■□□□□ 0.53
RAB42-201ENST00000373826 FMN1Q68DA7 1419 aa18.34■□□□□ 0.53
RAB42-201ENST00000373826 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
RAB42-201ENST00000373826 FGD6Q6ZV73 1430 aa18.33■□□□□ 0.53
RAB42-201ENST00000373826 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.52
RAB42-201ENST00000373826 NCOA2Q15596 1464 aa18.31■□□□□ 0.52
RAB42-201ENST00000373826 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
RAB42-201ENST00000373826 PTPN23Q9H3S7 1636 aa18.31■□□□□ 0.52
RAB42-201ENST00000373826 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
RAB42-201ENST00000373826 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
RAB42-201ENST00000373826 ABCA5Q8WWZ7 1642 aa18.3■□□□□ 0.52
RAB42-201ENST00000373826 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
RAB42-201ENST00000373826 CNTLNQ9NXG0 1405 aa18.27■□□□□ 0.52
RAB42-201ENST00000373826 LRRIQ1Q96JM4 1722 aa18.27■□□□□ 0.51
RAB42-201ENST00000373826 NOP58Q9Y2X3 529 aaKnown RBP18.26■□□□□ 0.51
RAB42-201ENST00000373826 ZBED9Q6R2W3 1325 aa18.26■□□□□ 0.51
RAB42-201ENST00000373826 HSPA5P11021 654 aaKnown RBP18.25■□□□□ 0.51
RAB42-201ENST00000373826 NAIPQ13075 1403 aa18.25■□□□□ 0.51
RAB42-201ENST00000373826 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
RAB42-201ENST00000373826 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
RAB42-201ENST00000373826 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
RAB42-201ENST00000373826 MTUS2Q5JR59 1369 aa18.22■□□□□ 0.51
RAB42-201ENST00000373826 GAPVD1Q14C86 1478 aa18.21■□□□□ 0.51
RAB42-201ENST00000373826 B4GALNT3Q6L9W6 998 aa18.21■□□□□ 0.51
RAB42-201ENST00000373826 EIF4G2P78344 907 aaKnown RBP eCLIP18.21■□□□□ 0.5
RAB42-201ENST00000373826 TDRD9Q8NDG6 1382 aaKnown RBP18.19■□□□□ 0.5
RAB42-201ENST00000373826 MYOM3Q5VTT5 1437 aa18.18■□□□□ 0.5
RAB42-201ENST00000373826 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
RAB42-201ENST00000373826 PRKRIP1Q9H875 184 aaPredicted RBP18.18■□□□□ 0.5
RAB42-201ENST00000373826 KIF21AQ7Z4S6 1674 aa18.18■□□□□ 0.5
RAB42-201ENST00000373826 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
RAB42-201ENST00000373826 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
RAB42-201ENST00000373826 CCDC184Q52MB2 194 aa18.16■□□□□ 0.5
RAB42-201ENST00000373826 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
RAB42-201ENST00000373826 CCDC7Q96M83 1385 aa18.14■□□□□ 0.5
RAB42-201ENST00000373826 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
RAB42-201ENST00000373826 UGGT2Q9NYU1 1516 aa18.14■□□□□ 0.49
RAB42-201ENST00000373826 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
RAB42-201ENST00000373826 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
RAB42-201ENST00000373826 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
RAB42-201ENST00000373826 PAK3O75914 559 aaPredicted RBP18.12■□□□□ 0.49
RAB42-201ENST00000373826 FAM9BQ8IZU0 186 aa18.12■□□□□ 0.49
RAB42-201ENST00000373826 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
RAB42-201ENST00000373826 ANP32AP39687 249 aaKnown RBP18.1■□□□□ 0.49
RAB42-201ENST00000373826 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
RAB42-201ENST00000373826 MAGI3Q5TCQ9 1506 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms