RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
PBX3-204ENST00000373489 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
PBX3-204ENST00000373489 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
PBX3-204ENST00000373489 NEFLP07196 543 aa22.85■■□□□ 1.25
PBX3-204ENST00000373489 URB2Q14146 1524 aaKnown RBP22.84■■□□□ 1.25
PBX3-204ENST00000373489 MSH5O43196 834 aa22.84■■□□□ 1.25
PBX3-204ENST00000373489 CUX2O14529 1486 aa22.83■■□□□ 1.25
PBX3-204ENST00000373489 ARAP1Q96P48 1450 aa22.82■■□□□ 1.24
PBX3-204ENST00000373489 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
PBX3-204ENST00000373489 TRIM52Q96A61 297 aa22.79■■□□□ 1.24
PBX3-204ENST00000373489 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
PBX3-204ENST00000373489 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
PBX3-204ENST00000373489 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
PBX3-204ENST00000373489 IGF1RP08069 1367 aa22.67■■□□□ 1.22
PBX3-204ENST00000373489 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
PBX3-204ENST00000373489 MRC2Q9UBG0 1479 aa22.67■■□□□ 1.22
PBX3-204ENST00000373489 HIRIP3Q9BW71 556 aaPredicted RBP22.67■■□□□ 1.22
PBX3-204ENST00000373489 ERICH6Q7L0X2 663 aa22.67■■□□□ 1.22
PBX3-204ENST00000373489 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
PBX3-204ENST00000373489 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
PBX3-204ENST00000373489 IRX6P78412 446 aaPredicted RBP22.59■■□□□ 1.21
PBX3-204ENST00000373489 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
PBX3-204ENST00000373489 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.2
PBX3-204ENST00000373489 SIN3AQ96ST3 1273 aa22.55■■□□□ 1.2
PBX3-204ENST00000373489 PRKCSHP14314 528 aaPredicted RBP22.53■■□□□ 1.2
PBX3-204ENST00000373489 RRBP1Q9P2E9 1410 aaKnown RBP22.53■■□□□ 1.2
PBX3-204ENST00000373489 WDR97A6NE52 1622 aa22.52■■□□□ 1.2
PBX3-204ENST00000373489 PPP1R15AO75807 674 aaPredicted RBP22.52■■□□□ 1.2
PBX3-204ENST00000373489 WDR62O43379 1518 aa22.51■■□□□ 1.19
PBX3-204ENST00000373489 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
PBX3-204ENST00000373489 ANP32CO43423 234 aa22.5■■□□□ 1.19
PBX3-204ENST00000373489 FANCIQ9NVI1 1328 aa22.5■■□□□ 1.19
PBX3-204ENST00000373489 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
PBX3-204ENST00000373489 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
PBX3-204ENST00000373489 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
PBX3-204ENST00000373489 CCNB3Q8WWL7 1395 aa22.47■■□□□ 1.19
PBX3-204ENST00000373489 ABCA5Q8WWZ7 1642 aa22.45■■□□□ 1.18
PBX3-204ENST00000373489 DEKP35659 375 aaKnown RBP22.43■■□□□ 1.18
PBX3-204ENST00000373489 CCER2I3L3R5 266 aa22.43■■□□□ 1.18
PBX3-204ENST00000373489 MAPKBP1O60336 1514 aa22.42■■□□□ 1.18
PBX3-204ENST00000373489 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
PBX3-204ENST00000373489 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.18
PBX3-204ENST00000373489 IFT140Q96RY7 1462 aa22.4■■□□□ 1.18
PBX3-204ENST00000373489 CUL7Q14999 1698 aa22.4■■□□□ 1.18
PBX3-204ENST00000373489 TIAM1Q13009 1591 aa22.37■■□□□ 1.17
PBX3-204ENST00000373489 HNRNPUQ00839 825 aaKnown RBP eCLIP22.36■■□□□ 1.17
PBX3-204ENST00000373489 MAP3K1Q13233 1512 aa22.35■■□□□ 1.17
PBX3-204ENST00000373489 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
PBX3-204ENST00000373489 NBR1Q14596 966 aa22.3■■□□□ 1.16
PBX3-204ENST00000373489 P3H3Q8IVL6 736 aa22.29■■□□□ 1.16
PBX3-204ENST00000373489 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
PBX3-204ENST00000373489 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
PBX3-204ENST00000373489 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
PBX3-204ENST00000373489 FHAD1B1AJZ9 1412 aa22.27■■□□□ 1.16
PBX3-204ENST00000373489 FAM50AQ14320 339 aaKnown RBP22.27■■□□□ 1.15
PBX3-204ENST00000373489 SETD5Q9C0A6 1442 aa22.26■■□□□ 1.15
PBX3-204ENST00000373489 PCF11O94913 1555 aaKnown RBP22.23■■□□□ 1.15
PBX3-204ENST00000373489 PHLDB1Q86UU1 1377 aa22.23■■□□□ 1.15
PBX3-204ENST00000373489 MYT1LQ9UL68 1186 aa22.22■■□□□ 1.15
PBX3-204ENST00000373489 ANO8Q9HCE9 1232 aaPredicted RBP22.22■■□□□ 1.15
PBX3-204ENST00000373489 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
PBX3-204ENST00000373489 FHOD3Q2V2M9 1422 aa22.21■■□□□ 1.15
PBX3-204ENST00000373489 B4GALNT3Q6L9W6 998 aa22.21■■□□□ 1.15
PBX3-204ENST00000373489 CFAP43Q8NDM7 1665 aa22.2■■□□□ 1.14
PBX3-204ENST00000373489 ATP1B4Q9UN42 357 aaPredicted RBP22.19■■□□□ 1.14
PBX3-204ENST00000373489 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
PBX3-204ENST00000373489 PPP4R2Q9NY27 417 aa22.17■■□□□ 1.14
PBX3-204ENST00000373489 CTTNBP2Q8WZ74 1663 aa22.17■■□□□ 1.14
PBX3-204ENST00000373489 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
PBX3-204ENST00000373489 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
PBX3-204ENST00000373489 EFCAB5A4FU69 1503 aa22.15■■□□□ 1.14
PBX3-204ENST00000373489 NOP58Q9Y2X3 529 aaKnown RBP22.13■■□□□ 1.13
PBX3-204ENST00000373489 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
PBX3-204ENST00000373489 CASKIN1Q8WXD9 1431 aa22.11■■□□□ 1.13
PBX3-204ENST00000373489 TIMELESSQ9UNS1 1208 aa22.1■■□□□ 1.13
PBX3-204ENST00000373489 FBLN2P98095 1184 aa22.07■■□□□ 1.12
PBX3-204ENST00000373489 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
PBX3-204ENST00000373489 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
PBX3-204ENST00000373489 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
PBX3-204ENST00000373489 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
PBX3-204ENST00000373489 SALL2Q9Y467 1007 aaPredicted RBP22.04■■□□□ 1.12
PBX3-204ENST00000373489 FMN1Q68DA7 1419 aa22.02■■□□□ 1.12
PBX3-204ENST00000373489 ERICH6BQ5W0A0 696 aa22.01■■□□□ 1.11
PBX3-204ENST00000373489 FAM9BQ8IZU0 186 aa22.01■■□□□ 1.11
PBX3-204ENST00000373489 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
PBX3-204ENST00000373489 SYNJ2O15056 1496 aa21.99■■□□□ 1.11
PBX3-204ENST00000373489 RTN4Q9NQC3 1192 aaKnown RBP21.98■■□□□ 1.11
PBX3-204ENST00000373489 IQGAP2Q13576 1575 aa21.97■■□□□ 1.11
PBX3-204ENST00000373489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.97■■□□□ 1.11
PBX3-204ENST00000373489 CCDC136Q96JN2 1154 aa21.96■■□□□ 1.11
PBX3-204ENST00000373489 SAMD9Q5K651 1589 aa21.96■■□□□ 1.11
PBX3-204ENST00000373489 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
PBX3-204ENST00000373489 IL27Q8NEV9 243 aa21.94■■□□□ 1.1
PBX3-204ENST00000373489 FGD6Q6ZV73 1430 aa21.92■■□□□ 1.1
PBX3-204ENST00000373489 KIAA0586Q9BVV6 1533 aa21.92■■□□□ 1.1
PBX3-204ENST00000373489 MTUS2Q5JR59 1369 aa21.91■■□□□ 1.1
PBX3-204ENST00000373489 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
PBX3-204ENST00000373489 WASHC2AQ641Q2 1341 aa21.91■■□□□ 1.1
PBX3-204ENST00000373489 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
PBX3-204ENST00000373489 ANP32AP39687 249 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms