RNA–Protein interactions for RNA: ENST00000372858.7

PABPC4-203, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-203ENST00000372858 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
PABPC4-203ENST00000372858 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
PABPC4-203ENST00000372858 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
PABPC4-203ENST00000372858 FAM50AQ14320 339 aaKnown RBP23.65■■□□□ 1.38
PABPC4-203ENST00000372858 MAPKBP1O60336 1514 aa23.65■■□□□ 1.38
PABPC4-203ENST00000372858 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
PABPC4-203ENST00000372858 PHLDB1Q86UU1 1377 aa23.62■■□□□ 1.37
PABPC4-203ENST00000372858 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
PABPC4-203ENST00000372858 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
PABPC4-203ENST00000372858 SIN3AQ96ST3 1273 aa23.57■■□□□ 1.36
PABPC4-203ENST00000372858 BCANQ96GW7 911 aa23.52■■□□□ 1.36
PABPC4-203ENST00000372858 TIMELESSQ9UNS1 1208 aa23.52■■□□□ 1.35
PABPC4-203ENST00000372858 PCF11O94913 1555 aaKnown RBP23.51■■□□□ 1.35
PABPC4-203ENST00000372858 FKBP8Q14318 412 aa23.51■■□□□ 1.35
PABPC4-203ENST00000372858 CFAP43Q8NDM7 1665 aa23.5■■□□□ 1.35
PABPC4-203ENST00000372858 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
PABPC4-203ENST00000372858 ANP32EQ9BTT0 268 aa23.5■■□□□ 1.35
PABPC4-203ENST00000372858 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
PABPC4-203ENST00000372858 PPP1R15AO75807 674 aaPredicted RBP23.48■■□□□ 1.35
PABPC4-203ENST00000372858 FHOD3Q2V2M9 1422 aa23.47■■□□□ 1.35
PABPC4-203ENST00000372858 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
PABPC4-203ENST00000372858 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
PABPC4-203ENST00000372858 NEFLP07196 543 aa23.41■■□□□ 1.34
PABPC4-203ENST00000372858 EFCAB5A4FU69 1503 aa23.41■■□□□ 1.34
PABPC4-203ENST00000372858 CASKIN1Q8WXD9 1431 aa23.41■■□□□ 1.34
PABPC4-203ENST00000372858 CCER2I3L3R5 266 aa23.4■■□□□ 1.34
PABPC4-203ENST00000372858 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
PABPC4-203ENST00000372858 ANP32CO43423 234 aa23.4■■□□□ 1.34
PABPC4-203ENST00000372858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.39■■□□□ 1.34
PABPC4-203ENST00000372858 DNMBPQ6XZF7 1577 aa23.39■■□□□ 1.33
PABPC4-203ENST00000372858 HIRIP3Q9BW71 556 aaPredicted RBP23.39■■□□□ 1.33
PABPC4-203ENST00000372858 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
PABPC4-203ENST00000372858 AQRO60306 1485 aaKnown RBP eCLIP23.37■■□□□ 1.335e-7■■■■■ 32.5
PABPC4-203ENST00000372858 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
PABPC4-203ENST00000372858 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
PABPC4-203ENST00000372858 FMN1Q68DA7 1419 aa23.34■■□□□ 1.33
PABPC4-203ENST00000372858 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
PABPC4-203ENST00000372858 CUL7Q14999 1698 aa23.32■■□□□ 1.32
PABPC4-203ENST00000372858 FGD6Q6ZV73 1430 aa23.3■■□□□ 1.32
PABPC4-203ENST00000372858 MTUS2Q5JR59 1369 aa23.3■■□□□ 1.32
PABPC4-203ENST00000372858 CTTNBP2Q8WZ74 1663 aa23.28■■□□□ 1.32
PABPC4-203ENST00000372858 TONSLQ96HA7 1378 aa23.28■■□□□ 1.32
PABPC4-203ENST00000372858 RBM19Q9Y4C8 960 aaKnown RBP23.24■■□□□ 1.31
PABPC4-203ENST00000372858 CCDC18Q5T9S5 1454 aa23.23■■□□□ 1.31
PABPC4-203ENST00000372858 NESP48681 1621 aa23.22■■□□□ 1.31
PABPC4-203ENST00000372858 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
PABPC4-203ENST00000372858 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
PABPC4-203ENST00000372858 UACAQ9BZF9 1416 aa23.19■■□□□ 1.3
PABPC4-203ENST00000372858 PTPRKQ15262 1439 aa23.16■■□□□ 1.3
PABPC4-203ENST00000372858 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
PABPC4-203ENST00000372858 MYOM3Q5VTT5 1437 aa23.14■■□□□ 1.29
PABPC4-203ENST00000372858 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
PABPC4-203ENST00000372858 PTPN23Q9H3S7 1636 aa23.13■■□□□ 1.29
PABPC4-203ENST00000372858 NAIPQ13075 1403 aa23.11■■□□□ 1.29
PABPC4-203ENST00000372858 URB2Q14146 1524 aaKnown RBP23.1■■□□□ 1.29
PABPC4-203ENST00000372858 SAMD9Q5K651 1589 aa23.1■■□□□ 1.29
PABPC4-203ENST00000372858 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
PABPC4-203ENST00000372858 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
PABPC4-203ENST00000372858 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
PABPC4-203ENST00000372858 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
PABPC4-203ENST00000372858 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
PABPC4-203ENST00000372858 THOC2Q8NI27 1593 aaKnown RBP23.05■■□□□ 1.28
PABPC4-203ENST00000372858 EHBP1L1Q8N3D4 1523 aa23.04■■□□□ 1.28
PABPC4-203ENST00000372858 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
PABPC4-203ENST00000372858 LRRIQ1Q96JM4 1722 aa23.04■■□□□ 1.28
PABPC4-203ENST00000372858 RRP7BPQ9NSQ0 103 aa23.01■■□□□ 1.27
PABPC4-203ENST00000372858 CHIC2Q9UKJ5 165 aa22.99■■□□□ 1.27
PABPC4-203ENST00000372858 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
PABPC4-203ENST00000372858 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
PABPC4-203ENST00000372858 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
PABPC4-203ENST00000372858 BCL11AQ9H165 835 aa22.95■■□□□ 1.26
PABPC4-203ENST00000372858 HSPA5P11021 654 aaKnown RBP22.94■■□□□ 1.26
PABPC4-203ENST00000372858 IRX6P78412 446 aaPredicted RBP22.94■■□□□ 1.26
PABPC4-203ENST00000372858 WASHC2AQ641Q2 1341 aa22.93■■□□□ 1.26
PABPC4-203ENST00000372858 MSH5O43196 834 aa22.92■■□□□ 1.26
PABPC4-203ENST00000372858 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
PABPC4-203ENST00000372858 KDM5BQ9UGL1 1544 aa22.91■■□□□ 1.26
PABPC4-203ENST00000372858 KIF21AQ7Z4S6 1674 aa22.91■■□□□ 1.26
PABPC4-203ENST00000372858 MAGI3Q5TCQ9 1506 aa22.91■■□□□ 1.26
PABPC4-203ENST00000372858 FANCIQ9NVI1 1328 aa22.89■■□□□ 1.25
PABPC4-203ENST00000372858 TCOF1Q13428 1488 aaKnown RBP22.89■■□□□ 1.25
PABPC4-203ENST00000372858 EIF4G2P78344 907 aaKnown RBP eCLIP22.89■■□□□ 1.25
PABPC4-203ENST00000372858 ERICH6BQ5W0A0 696 aa22.88■■□□□ 1.25
PABPC4-203ENST00000372858 HECW1Q76N89 1606 aa22.87■■□□□ 1.25
PABPC4-203ENST00000372858 MPHOSPH9Q99550 1183 aa22.85■■□□□ 1.25
PABPC4-203ENST00000372858 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
PABPC4-203ENST00000372858 GCC2Q8IWJ2 1684 aa22.85■■□□□ 1.25
PABPC4-203ENST00000372858 EPRSP07814 1512 aaKnown RBP22.83■■□□□ 1.25
PABPC4-203ENST00000372858 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
PABPC4-203ENST00000372858 PPP4R2Q9NY27 417 aa22.82■■□□□ 1.24
PABPC4-203ENST00000372858 DENND4BO75064 1496 aaPredicted RBP22.81■■□□□ 1.24
PABPC4-203ENST00000372858 ARID3CA6NKF2 412 aa22.8■■□□□ 1.24
PABPC4-203ENST00000372858 L3MBTL2Q969R5 705 aa22.8■■□□□ 1.24
PABPC4-203ENST00000372858 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
PABPC4-203ENST00000372858 IQGAP2Q13576 1575 aa22.8■■□□□ 1.24
PABPC4-203ENST00000372858 CCDC184Q52MB2 194 aa22.79■■□□□ 1.24
PABPC4-203ENST00000372858 CNTLNQ9NXG0 1405 aa22.79■■□□□ 1.24
PABPC4-203ENST00000372858 ERICH6Q7L0X2 663 aa22.79■■□□□ 1.24
PABPC4-203ENST00000372858 KDM6BO15054 1643 aa22.77■■□□□ 1.24
PABPC4-203ENST00000372858 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms