RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 P3H3Q8IVL6 736 aa21.28■■□□□ 1
COL9A2-202ENST00000372748 ATP1B4Q9UN42 357 aaPredicted RBP21.24■□□□□ 0.99
COL9A2-202ENST00000372748 ANP32EQ9BTT0 268 aa21.22■□□□□ 0.99
COL9A2-202ENST00000372748 NESP48681 1621 aa21.21■□□□□ 0.99
COL9A2-202ENST00000372748 FKBP8Q14318 412 aa21.16■□□□□ 0.98
COL9A2-202ENST00000372748 FANCD2Q9BXW9 1451 aa21.16■□□□□ 0.98
COL9A2-202ENST00000372748 DDX10Q13206 875 aaKnown RBP21.16■□□□□ 0.98
COL9A2-202ENST00000372748 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
COL9A2-202ENST00000372748 TIAM1Q13009 1591 aa21.14■□□□□ 0.98
COL9A2-202ENST00000372748 RAB3GAP2Q9H2M9 1393 aa21.14■□□□□ 0.97
COL9A2-202ENST00000372748 FAM50AQ14320 339 aaKnown RBP21.13■□□□□ 0.97
COL9A2-202ENST00000372748 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
COL9A2-202ENST00000372748 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
COL9A2-202ENST00000372748 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
COL9A2-202ENST00000372748 HIRIP3Q9BW71 556 aaPredicted RBP21.07■□□□□ 0.96
COL9A2-202ENST00000372748 MAPKBP1O60336 1514 aa21.07■□□□□ 0.96
COL9A2-202ENST00000372748 FHOD3Q2V2M9 1422 aa21.06■□□□□ 0.96
COL9A2-202ENST00000372748 MAP3K1Q13233 1512 aa21.03■□□□□ 0.96
COL9A2-202ENST00000372748 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
COL9A2-202ENST00000372748 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.96
COL9A2-202ENST00000372748 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
COL9A2-202ENST00000372748 TRIM52Q96A61 297 aa21.02■□□□□ 0.96
COL9A2-202ENST00000372748 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
COL9A2-202ENST00000372748 TOPBP1Q92547 1522 aa21.01■□□□□ 0.95
COL9A2-202ENST00000372748 DNMBPQ6XZF7 1577 aa21■□□□□ 0.95
COL9A2-202ENST00000372748 WDR97A6NE52 1622 aa21■□□□□ 0.95
COL9A2-202ENST00000372748 ABCA10Q8WWZ4 1543 aa20.97■□□□□ 0.95
COL9A2-202ENST00000372748 NEFLP07196 543 aa20.96■□□□□ 0.95
COL9A2-202ENST00000372748 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
COL9A2-202ENST00000372748 RBM19Q9Y4C8 960 aaKnown RBP20.95■□□□□ 0.94
COL9A2-202ENST00000372748 CFAP43Q8NDM7 1665 aa20.92■□□□□ 0.94
COL9A2-202ENST00000372748 BCL11AQ9H165 835 aa20.91■□□□□ 0.94
COL9A2-202ENST00000372748 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
COL9A2-202ENST00000372748 ANP32CO43423 234 aa20.87■□□□□ 0.93
COL9A2-202ENST00000372748 CASKIN1Q8WXD9 1431 aa20.87■□□□□ 0.93
COL9A2-202ENST00000372748 FYCO1Q9BQS8 1478 aa20.87■□□□□ 0.93
COL9A2-202ENST00000372748 URB2Q14146 1524 aaKnown RBP20.85■□□□□ 0.93
COL9A2-202ENST00000372748 EFCAB5A4FU69 1503 aa20.84■□□□□ 0.93
COL9A2-202ENST00000372748 CUL7Q14999 1698 aa20.84■□□□□ 0.93
COL9A2-202ENST00000372748 CTTNBP2Q8WZ74 1663 aa20.82■□□□□ 0.92
COL9A2-202ENST00000372748 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
COL9A2-202ENST00000372748 MTUS2Q5JR59 1369 aa20.8■□□□□ 0.92
COL9A2-202ENST00000372748 FMN1Q68DA7 1419 aa20.79■□□□□ 0.92
COL9A2-202ENST00000372748 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
COL9A2-202ENST00000372748 AQRO60306 1485 aaKnown RBP eCLIP20.78■□□□□ 0.92
COL9A2-202ENST00000372748 LAMC3Q9Y6N6 1575 aa20.78■□□□□ 0.92
COL9A2-202ENST00000372748 FGD6Q6ZV73 1430 aa20.76■□□□□ 0.91
COL9A2-202ENST00000372748 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
COL9A2-202ENST00000372748 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
COL9A2-202ENST00000372748 TIMELESSQ9UNS1 1208 aa20.75■□□□□ 0.91
COL9A2-202ENST00000372748 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
COL9A2-202ENST00000372748 MSH5O43196 834 aa20.73■□□□□ 0.91
COL9A2-202ENST00000372748 PTPRKQ15262 1439 aa20.71■□□□□ 0.91
COL9A2-202ENST00000372748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.7■□□□□ 0.9
COL9A2-202ENST00000372748 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
COL9A2-202ENST00000372748 ABCA5Q8WWZ7 1642 aa20.69■□□□□ 0.9
COL9A2-202ENST00000372748 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
COL9A2-202ENST00000372748 HNRNPUQ00839 825 aaKnown RBP eCLIP20.68■□□□□ 0.9
COL9A2-202ENST00000372748 LRRIQ1Q96JM4 1722 aa20.67■□□□□ 0.9
COL9A2-202ENST00000372748 CCDC18Q5T9S5 1454 aa20.66■□□□□ 0.9
COL9A2-202ENST00000372748 NCOA2Q15596 1464 aa20.65■□□□□ 0.9
COL9A2-202ENST00000372748 ARID3CA6NKF2 412 aa20.65■□□□□ 0.9
COL9A2-202ENST00000372748 SAMD9Q5K651 1589 aa20.65■□□□□ 0.9
COL9A2-202ENST00000372748 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
COL9A2-202ENST00000372748 CHIC2Q9UKJ5 165 aa20.63■□□□□ 0.89
COL9A2-202ENST00000372748 GRIN2BQ13224 1484 aa20.63■□□□□ 0.89
COL9A2-202ENST00000372748 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
COL9A2-202ENST00000372748 RRP7BPQ9NSQ0 103 aa20.61■□□□□ 0.89
COL9A2-202ENST00000372748 HFM1A2PYH4 1435 aa20.6■□□□□ 0.89
COL9A2-202ENST00000372748 PTPN23Q9H3S7 1636 aa20.58■□□□□ 0.88
COL9A2-202ENST00000372748 NAIPQ13075 1403 aa20.58■□□□□ 0.88
COL9A2-202ENST00000372748 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.88
COL9A2-202ENST00000372748 UACAQ9BZF9 1416 aa20.57■□□□□ 0.88
COL9A2-202ENST00000372748 MAGI3Q5TCQ9 1506 aa20.55■□□□□ 0.88
COL9A2-202ENST00000372748 SUPT6HQ7KZ85 1726 aaKnown RBP20.55■□□□□ 0.88
COL9A2-202ENST00000372748 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
COL9A2-202ENST00000372748 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
COL9A2-202ENST00000372748 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
COL9A2-202ENST00000372748 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
COL9A2-202ENST00000372748 UGGT2Q9NYU1 1516 aa20.5■□□□□ 0.87
COL9A2-202ENST00000372748 WASHC2AQ641Q2 1341 aa20.48■□□□□ 0.87
COL9A2-202ENST00000372748 MRC2Q9UBG0 1479 aa20.48■□□□□ 0.87
COL9A2-202ENST00000372748 THOC2Q8NI27 1593 aaKnown RBP20.48■□□□□ 0.87
COL9A2-202ENST00000372748 CCDC184Q52MB2 194 aa20.48■□□□□ 0.87
COL9A2-202ENST00000372748 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
COL9A2-202ENST00000372748 CDK13Q14004 1512 aaKnown RBP20.46■□□□□ 0.87
COL9A2-202ENST00000372748 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
COL9A2-202ENST00000372748 EPRSP07814 1512 aaKnown RBP20.44■□□□□ 0.86
COL9A2-202ENST00000372748 IQGAP2Q13576 1575 aa20.43■□□□□ 0.86
COL9A2-202ENST00000372748 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
COL9A2-202ENST00000372748 FOXD1Q16676 465 aa20.43■□□□□ 0.86
COL9A2-202ENST00000372748 FAM9BQ8IZU0 186 aa20.41■□□□□ 0.86
COL9A2-202ENST00000372748 HECW1Q76N89 1606 aa20.41■□□□□ 0.86
COL9A2-202ENST00000372748 B4GALNT3Q6L9W6 998 aa20.4■□□□□ 0.86
COL9A2-202ENST00000372748 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
COL9A2-202ENST00000372748 KDM6BO15054 1643 aa20.39■□□□□ 0.85
COL9A2-202ENST00000372748 KDM5BQ9UGL1 1544 aa20.39■□□□□ 0.85
COL9A2-202ENST00000372748 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
COL9A2-202ENST00000372748 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
COL9A2-202ENST00000372748 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms