RNA–Protein interactions for RNA: ENST00000372113.6

LRIT2-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT2, Length 3,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-201ENST00000372113 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
LRIT2-201ENST00000372113 RBM19Q9Y4C8 960 aaKnown RBP16.53■□□□□ 0.24
LRIT2-201ENST00000372113 MAPKBP1O60336 1514 aa16.53■□□□□ 0.24
LRIT2-201ENST00000372113 CUX2O14529 1486 aa16.52■□□□□ 0.23
LRIT2-201ENST00000372113 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
LRIT2-201ENST00000372113 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
LRIT2-201ENST00000372113 NESP48681 1621 aa16.5■□□□□ 0.23
LRIT2-201ENST00000372113 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
LRIT2-201ENST00000372113 FAM50AQ14320 339 aaKnown RBP16.49■□□□□ 0.23
LRIT2-201ENST00000372113 NEFLP07196 543 aa16.48■□□□□ 0.23
LRIT2-201ENST00000372113 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
LRIT2-201ENST00000372113 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
LRIT2-201ENST00000372113 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
LRIT2-201ENST00000372113 SETD5Q9C0A6 1442 aa16.43■□□□□ 0.22
LRIT2-201ENST00000372113 ATP1B4Q9UN42 357 aaPredicted RBP16.43■□□□□ 0.22
LRIT2-201ENST00000372113 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
LRIT2-201ENST00000372113 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
LRIT2-201ENST00000372113 ANP32CO43423 234 aa16.4■□□□□ 0.22
LRIT2-201ENST00000372113 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.22
LRIT2-201ENST00000372113 MSH5O43196 834 aa16.39■□□□□ 0.21
LRIT2-201ENST00000372113 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
LRIT2-201ENST00000372113 IGF1RP08069 1367 aa16.36■□□□□ 0.21
LRIT2-201ENST00000372113 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
LRIT2-201ENST00000372113 CCER2I3L3R5 266 aa16.33■□□□□ 0.2
LRIT2-201ENST00000372113 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
LRIT2-201ENST00000372113 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
LRIT2-201ENST00000372113 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
LRIT2-201ENST00000372113 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
LRIT2-201ENST00000372113 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
LRIT2-201ENST00000372113 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
LRIT2-201ENST00000372113 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
LRIT2-201ENST00000372113 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
LRIT2-201ENST00000372113 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
LRIT2-201ENST00000372113 TONSLQ96HA7 1378 aa16.22■□□□□ 0.19
LRIT2-201ENST00000372113 TIMELESSQ9UNS1 1208 aa16.22■□□□□ 0.19
LRIT2-201ENST00000372113 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
LRIT2-201ENST00000372113 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
LRIT2-201ENST00000372113 CDK11AQ9UQ88 783 aaPredicted RBP16.2■□□□□ 0.18
LRIT2-201ENST00000372113 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
LRIT2-201ENST00000372113 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
LRIT2-201ENST00000372113 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
LRIT2-201ENST00000372113 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
LRIT2-201ENST00000372113 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
LRIT2-201ENST00000372113 FHOD3Q2V2M9 1422 aa16.15■□□□□ 0.18
LRIT2-201ENST00000372113 PCF11O94913 1555 aaKnown RBP16.15■□□□□ 0.18
LRIT2-201ENST00000372113 FANCIQ9NVI1 1328 aa16.13■□□□□ 0.17
LRIT2-201ENST00000372113 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
LRIT2-201ENST00000372113 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
LRIT2-201ENST00000372113 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
LRIT2-201ENST00000372113 HSPA5P11021 654 aaKnown RBP16.09■□□□□ 0.17
LRIT2-201ENST00000372113 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
LRIT2-201ENST00000372113 CCDC18Q5T9S5 1454 aa16.09■□□□□ 0.17
LRIT2-201ENST00000372113 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.17
LRIT2-201ENST00000372113 FAM9BQ8IZU0 186 aa16.08■□□□□ 0.16
LRIT2-201ENST00000372113 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.16
LRIT2-201ENST00000372113 PPP4R2Q9NY27 417 aa16.05■□□□□ 0.16
LRIT2-201ENST00000372113 GAPVD1Q14C86 1478 aa16.05■□□□□ 0.16
LRIT2-201ENST00000372113 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
LRIT2-201ENST00000372113 FGD6Q6ZV73 1430 aa16.04■□□□□ 0.16
LRIT2-201ENST00000372113 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
LRIT2-201ENST00000372113 RRP7BPQ9NSQ0 103 aa16.03■□□□□ 0.16
LRIT2-201ENST00000372113 CUL7Q14999 1698 aa16.03■□□□□ 0.16
LRIT2-201ENST00000372113 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
LRIT2-201ENST00000372113 C11orf95C9JLR9 678 aaPredicted RBP16.02■□□□□ 0.16
LRIT2-201ENST00000372113 UACAQ9BZF9 1416 aa16.02■□□□□ 0.15
LRIT2-201ENST00000372113 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.15
LRIT2-201ENST00000372113 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
LRIT2-201ENST00000372113 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
LRIT2-201ENST00000372113 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
LRIT2-201ENST00000372113 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
LRIT2-201ENST00000372113 FOXD1Q16676 465 aa15.98■□□□□ 0.15
LRIT2-201ENST00000372113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
LRIT2-201ENST00000372113 CASKIN1Q8WXD9 1431 aa15.98■□□□□ 0.15
LRIT2-201ENST00000372113 DEKP35659 375 aaKnown RBP15.98■□□□□ 0.15
LRIT2-201ENST00000372113 HFM1A2PYH4 1435 aa15.98■□□□□ 0.15
LRIT2-201ENST00000372113 NAIPQ13075 1403 aa15.98■□□□□ 0.15
LRIT2-201ENST00000372113 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
LRIT2-201ENST00000372113 MRS2Q9HD23 443 aa15.98■□□□□ 0.15
LRIT2-201ENST00000372113 FYCO1Q9BQS8 1478 aa15.97■□□□□ 0.15
LRIT2-201ENST00000372113 NBR1Q14596 966 aa15.97■□□□□ 0.15
LRIT2-201ENST00000372113 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
LRIT2-201ENST00000372113 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
LRIT2-201ENST00000372113 PRKRIP1Q9H875 184 aaPredicted RBP15.95■□□□□ 0.14
LRIT2-201ENST00000372113 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
LRIT2-201ENST00000372113 L3MBTL2Q969R5 705 aa15.93■□□□□ 0.14
LRIT2-201ENST00000372113 ERICH6BQ5W0A0 696 aa15.92■□□□□ 0.14
LRIT2-201ENST00000372113 CNTLNQ9NXG0 1405 aa15.9■□□□□ 0.14
LRIT2-201ENST00000372113 ZNF608Q9ULD9 1512 aaPredicted RBP15.9■□□□□ 0.14
LRIT2-201ENST00000372113 FMN1Q68DA7 1419 aa15.89■□□□□ 0.13
LRIT2-201ENST00000372113 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
LRIT2-201ENST00000372113 NOP58Q9Y2X3 529 aaKnown RBP15.88■□□□□ 0.13
LRIT2-201ENST00000372113 EFCAB5A4FU69 1503 aa15.88■□□□□ 0.13
LRIT2-201ENST00000372113 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
LRIT2-201ENST00000372113 DENND4BO75064 1496 aaPredicted RBP15.87■□□□□ 0.13
LRIT2-201ENST00000372113 ARID3CA6NKF2 412 aa15.87■□□□□ 0.13
LRIT2-201ENST00000372113 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
LRIT2-201ENST00000372113 NBPF8Q3BBV2 869 aa15.87■□□□□ 0.13
LRIT2-201ENST00000372113 ZBED9Q6R2W3 1325 aa15.87■□□□□ 0.13
LRIT2-201ENST00000372113 CCDC7Q96M83 1385 aa15.87■□□□□ 0.13
LRIT2-201ENST00000372113 SNAPC4Q5SXM2 1469 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms