RNA–Protein interactions for RNA: ENST00000371217.9

TCTN3-203, Transcript of tectonic family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-203ENST00000371217 SETD5Q9C0A6 1442 aa14.21□□□□□ -0.13
TCTN3-203ENST00000371217 TIAM1Q13009 1591 aa14.21□□□□□ -0.13
TCTN3-203ENST00000371217 LRRC9Q6ZRR7 1453 aa14.2□□□□□ -0.14
TCTN3-203ENST00000371217 PHLDB1Q86UU1 1377 aa14.2□□□□□ -0.14
TCTN3-203ENST00000371217 FGD5Q6ZNL6 1462 aa14.2□□□□□ -0.14
TCTN3-203ENST00000371217 MAP3K1Q13233 1512 aa14.2□□□□□ -0.14
TCTN3-203ENST00000371217 MAPKBP1O60336 1514 aa14.19□□□□□ -0.14
TCTN3-203ENST00000371217 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
TCTN3-203ENST00000371217 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
TCTN3-203ENST00000371217 FHAD1B1AJZ9 1412 aa14.16□□□□□ -0.14
TCTN3-203ENST00000371217 DDX10Q13206 875 aaKnown RBP14.14□□□□□ -0.15
TCTN3-203ENST00000371217 PRDM2Q13029 1718 aa14.13□□□□□ -0.15
TCTN3-203ENST00000371217 FHOD3Q2V2M9 1422 aa14.1□□□□□ -0.15
TCTN3-203ENST00000371217 WDR97A6NE52 1622 aa14.09□□□□□ -0.15
TCTN3-203ENST00000371217 PCF11O94913 1555 aaKnown RBP14.08□□□□□ -0.16
TCTN3-203ENST00000371217 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
TCTN3-203ENST00000371217 HIRIP3Q9BW71 556 aaPredicted RBP14.08□□□□□ -0.16
TCTN3-203ENST00000371217 TIMELESSQ9UNS1 1208 aa14.08□□□□□ -0.16
TCTN3-203ENST00000371217 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
TCTN3-203ENST00000371217 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
TCTN3-203ENST00000371217 CFAP43Q8NDM7 1665 aa14.04□□□□□ -0.16
TCTN3-203ENST00000371217 CASKIN1Q8WXD9 1431 aa14.03□□□□□ -0.16
TCTN3-203ENST00000371217 FYCO1Q9BQS8 1478 aa14.03□□□□□ -0.16
TCTN3-203ENST00000371217 TSHZ2Q9NRE2 1034 aa14.02□□□□□ -0.17
TCTN3-203ENST00000371217 ABCA10Q8WWZ4 1543 aa14.01□□□□□ -0.17
TCTN3-203ENST00000371217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.17
TCTN3-203ENST00000371217 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
TCTN3-203ENST00000371217 BCANQ96GW7 911 aa14□□□□□ -0.17
TCTN3-203ENST00000371217 ANP32CO43423 234 aa13.99□□□□□ -0.17
TCTN3-203ENST00000371217 EFCAB5A4FU69 1503 aa13.99□□□□□ -0.17
TCTN3-203ENST00000371217 DNMBPQ6XZF7 1577 aa13.99□□□□□ -0.17
TCTN3-203ENST00000371217 FKBP8Q14318 412 aa13.99□□□□□ -0.17
TCTN3-203ENST00000371217 CC2D2AQ9P2K1 1620 aa13.99□□□□□ -0.17
TCTN3-203ENST00000371217 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.17
TCTN3-203ENST00000371217 TOPBP1Q92547 1522 aa13.98□□□□□ -0.17
TCTN3-203ENST00000371217 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
TCTN3-203ENST00000371217 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
TCTN3-203ENST00000371217 TONSLQ96HA7 1378 aa13.98□□□□□ -0.17
TCTN3-203ENST00000371217 FMN1Q68DA7 1419 aa13.97□□□□□ -0.17
TCTN3-203ENST00000371217 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
TCTN3-203ENST00000371217 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
TCTN3-203ENST00000371217 NESP48681 1621 aa13.95□□□□□ -0.18
TCTN3-203ENST00000371217 PTPRKQ15262 1439 aa13.93□□□□□ -0.18
TCTN3-203ENST00000371217 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
TCTN3-203ENST00000371217 CUL7Q14999 1698 aa13.92□□□□□ -0.18
TCTN3-203ENST00000371217 NEFLP07196 543 aa13.92□□□□□ -0.18
TCTN3-203ENST00000371217 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
TCTN3-203ENST00000371217 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
TCTN3-203ENST00000371217 HFM1A2PYH4 1435 aa13.91□□□□□ -0.18
TCTN3-203ENST00000371217 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
TCTN3-203ENST00000371217 CTTNBP2Q8WZ74 1663 aa13.89□□□□□ -0.19
TCTN3-203ENST00000371217 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
TCTN3-203ENST00000371217 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
TCTN3-203ENST00000371217 NAIPQ13075 1403 aa13.87□□□□□ -0.19
TCTN3-203ENST00000371217 MYOM3Q5VTT5 1437 aa13.87□□□□□ -0.19
TCTN3-203ENST00000371217 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
TCTN3-203ENST00000371217 PTPN23Q9H3S7 1636 aa13.85□□□□□ -0.19
TCTN3-203ENST00000371217 CHIC2Q9UKJ5 165 aa13.85□□□□□ -0.19
TCTN3-203ENST00000371217 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
TCTN3-203ENST00000371217 GAPVD1Q14C86 1478 aa13.84□□□□□ -0.19
TCTN3-203ENST00000371217 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
TCTN3-203ENST00000371217 SAMD9Q5K651 1589 aa13.81□□□□□ -0.2
TCTN3-203ENST00000371217 ANP32EQ9BTT0 268 aa13.8□□□□□ -0.2
TCTN3-203ENST00000371217 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
TCTN3-203ENST00000371217 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
TCTN3-203ENST00000371217 EHBP1L1Q8N3D4 1523 aa13.78□□□□□ -0.2
TCTN3-203ENST00000371217 SUPT6HQ7KZ85 1726 aaKnown RBP13.78□□□□□ -0.2
TCTN3-203ENST00000371217 LRRIQ1Q96JM4 1722 aa13.78□□□□□ -0.2
TCTN3-203ENST00000371217 ABCA5Q8WWZ7 1642 aa13.78□□□□□ -0.2
TCTN3-203ENST00000371217 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
TCTN3-203ENST00000371217 UGGT2Q9NYU1 1516 aa13.76□□□□□ -0.21
TCTN3-203ENST00000371217 WASHC2AQ641Q2 1341 aa13.76□□□□□ -0.21
TCTN3-203ENST00000371217 ARID3CA6NKF2 412 aa13.76□□□□□ -0.21
TCTN3-203ENST00000371217 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
TCTN3-203ENST00000371217 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
TCTN3-203ENST00000371217 KDM5BQ9UGL1 1544 aa13.75□□□□□ -0.21
TCTN3-203ENST00000371217 PDS5BQ9NTI5 1447 aa13.75□□□□□ -0.21
TCTN3-203ENST00000371217 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
TCTN3-203ENST00000371217 MAGI3Q5TCQ9 1506 aa13.75□□□□□ -0.21
TCTN3-203ENST00000371217 MPHOSPH9Q99550 1183 aa13.74□□□□□ -0.21
TCTN3-203ENST00000371217 FOXD1Q16676 465 aa13.73□□□□□ -0.21
TCTN3-203ENST00000371217 ARHGEF11O15085 1522 aa13.72□□□□□ -0.21
TCTN3-203ENST00000371217 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
TCTN3-203ENST00000371217 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
TCTN3-203ENST00000371217 TCOF1Q13428 1488 aaKnown RBP13.71□□□□□ -0.21
TCTN3-203ENST00000371217 DENND4BO75064 1496 aaPredicted RBP13.71□□□□□ -0.22
TCTN3-203ENST00000371217 IRX6P78412 446 aaPredicted RBP13.7□□□□□ -0.22
TCTN3-203ENST00000371217 EPRSP07814 1512 aaKnown RBP13.69□□□□□ -0.22
TCTN3-203ENST00000371217 KDM6BO15054 1643 aa13.67□□□□□ -0.22
TCTN3-203ENST00000371217 MIA2Q96PC5 1412 aa13.67□□□□□ -0.22
TCTN3-203ENST00000371217 C11orf95C9JLR9 678 aaPredicted RBP13.67□□□□□ -0.22
TCTN3-203ENST00000371217 CCDC184Q52MB2 194 aa13.67□□□□□ -0.22
TCTN3-203ENST00000371217 HECW1Q76N89 1606 aa13.67□□□□□ -0.22
TCTN3-203ENST00000371217 AKNAQ7Z591 1439 aa13.67□□□□□ -0.22
TCTN3-203ENST00000371217 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
TCTN3-203ENST00000371217 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
TCTN3-203ENST00000371217 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
TCTN3-203ENST00000371217 GCC2Q8IWJ2 1684 aa13.64□□□□□ -0.23
TCTN3-203ENST00000371217 KIF21AQ7Z4S6 1674 aa13.64□□□□□ -0.23
TCTN3-203ENST00000371217 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms