RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 SETD5Q9C0A6 1442 aa25.26■■□□□ 1.63
CHUK-201ENST00000370397 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
CHUK-201ENST00000370397 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
CHUK-201ENST00000370397 IGF1RP08069 1367 aa25.23■■□□□ 1.63
CHUK-201ENST00000370397 PPP1R15AO75807 674 aaPredicted RBP25.22■■□□□ 1.63
CHUK-201ENST00000370397 ANP32EQ9BTT0 268 aa25.22■■□□□ 1.63
CHUK-201ENST00000370397 PCF11O94913 1555 aaKnown RBP25.2■■□□□ 1.62
CHUK-201ENST00000370397 ITGAEP38570 1179 aa25.1■■□□□ 1.61
CHUK-201ENST00000370397 SIN3AQ96ST3 1273 aa25.09■■□□□ 1.61
CHUK-201ENST00000370397 TIMELESSQ9UNS1 1208 aa25.05■■□□□ 1.6
CHUK-201ENST00000370397 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.05■■□□□ 1.6
CHUK-201ENST00000370397 DDX10Q13206 875 aaKnown RBP25.05■■□□□ 1.6
CHUK-201ENST00000370397 KDM5BQ9UGL1 1544 aa25.04■■□□□ 1.6
CHUK-201ENST00000370397 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
CHUK-201ENST00000370397 CARMIL1Q5VZK9 1371 aa25.01■■□□□ 1.59
CHUK-201ENST00000370397 FKBP8Q14318 412 aa25.01■■□□□ 1.59
CHUK-201ENST00000370397 CCER2I3L3R5 266 aa25■■□□□ 1.59
CHUK-201ENST00000370397 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
CHUK-201ENST00000370397 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
CHUK-201ENST00000370397 CADPSQ9ULU8 1353 aa24.99■■□□□ 1.59
CHUK-201ENST00000370397 FYCO1Q9BQS8 1478 aa24.98■■□□□ 1.59
CHUK-201ENST00000370397 BCANQ96GW7 911 aa24.96■■□□□ 1.59
CHUK-201ENST00000370397 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.59
CHUK-201ENST00000370397 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
CHUK-201ENST00000370397 CTTNBP2Q8WZ74 1663 aa24.93■■□□□ 1.58
CHUK-201ENST00000370397 EFCAB5A4FU69 1503 aa24.92■■□□□ 1.58
CHUK-201ENST00000370397 CASKIN1Q8WXD9 1431 aa24.9■■□□□ 1.58
CHUK-201ENST00000370397 RBM19Q9Y4C8 960 aaKnown RBP24.9■■□□□ 1.58
CHUK-201ENST00000370397 PTPN23Q9H3S7 1636 aa24.89■■□□□ 1.58
CHUK-201ENST00000370397 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
CHUK-201ENST00000370397 PTPRKQ15262 1439 aa24.88■■□□□ 1.57
CHUK-201ENST00000370397 FHOD3Q2V2M9 1422 aa24.85■■□□□ 1.57
CHUK-201ENST00000370397 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
CHUK-201ENST00000370397 FGD6Q6ZV73 1430 aa24.83■■□□□ 1.57
CHUK-201ENST00000370397 HFM1A2PYH4 1435 aa24.83■■□□□ 1.57
CHUK-201ENST00000370397 NESP48681 1621 aa24.82■■□□□ 1.56
CHUK-201ENST00000370397 CCDC18Q5T9S5 1454 aa24.82■■□□□ 1.56
CHUK-201ENST00000370397 FAM50AQ14320 339 aaKnown RBP24.82■■□□□ 1.56
CHUK-201ENST00000370397 TRIM52Q96A61 297 aa24.81■■□□□ 1.56
CHUK-201ENST00000370397 CUL7Q14999 1698 aa24.8■■□□□ 1.56
CHUK-201ENST00000370397 UACAQ9BZF9 1416 aa24.8■■□□□ 1.56
CHUK-201ENST00000370397 ABCA10Q8WWZ4 1543 aa24.78■■□□□ 1.56
CHUK-201ENST00000370397 SAMD9Q5K651 1589 aa24.77■■□□□ 1.56
CHUK-201ENST00000370397 MSH5O43196 834 aa24.77■■□□□ 1.56
CHUK-201ENST00000370397 DENND4BO75064 1496 aaPredicted RBP24.77■■□□□ 1.56
CHUK-201ENST00000370397 BCL11AQ9H165 835 aa24.75■■□□□ 1.55
CHUK-201ENST00000370397 NAIPQ13075 1403 aa24.74■■□□□ 1.55
CHUK-201ENST00000370397 ANP32CO43423 234 aa24.73■■□□□ 1.55
CHUK-201ENST00000370397 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
CHUK-201ENST00000370397 FANCD2Q9BXW9 1451 aa24.71■■□□□ 1.55
CHUK-201ENST00000370397 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
CHUK-201ENST00000370397 GCC2Q8IWJ2 1684 aa24.7■■□□□ 1.54
CHUK-201ENST00000370397 NCOA2Q15596 1464 aa24.68■■□□□ 1.54
CHUK-201ENST00000370397 HECW1Q76N89 1606 aa24.68■■□□□ 1.54
CHUK-201ENST00000370397 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
CHUK-201ENST00000370397 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
CHUK-201ENST00000370397 P3H3Q8IVL6 736 aa24.66■■□□□ 1.54
CHUK-201ENST00000370397 GRIN2BQ13224 1484 aa24.66■■□□□ 1.54
CHUK-201ENST00000370397 PDS5BQ9NTI5 1447 aa24.66■■□□□ 1.54
CHUK-201ENST00000370397 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
CHUK-201ENST00000370397 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
CHUK-201ENST00000370397 TONSLQ96HA7 1378 aa24.64■■□□□ 1.54
CHUK-201ENST00000370397 NEFLP07196 543 aa24.63■■□□□ 1.53
CHUK-201ENST00000370397 FMN1Q68DA7 1419 aa24.63■■□□□ 1.53
CHUK-201ENST00000370397 SUPT6HQ7KZ85 1726 aaKnown RBP24.62■■□□□ 1.53
CHUK-201ENST00000370397 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
CHUK-201ENST00000370397 MAGI3Q5TCQ9 1506 aa24.6■■□□□ 1.53
CHUK-201ENST00000370397 UGGT2Q9NYU1 1516 aa24.6■■□□□ 1.53
CHUK-201ENST00000370397 KDM6BO15054 1643 aa24.6■■□□□ 1.53
CHUK-201ENST00000370397 FANCIQ9NVI1 1328 aa24.6■■□□□ 1.53
CHUK-201ENST00000370397 MYOM3Q5VTT5 1437 aa24.6■■□□□ 1.53
CHUK-201ENST00000370397 POLR1AO95602 1720 aaPredicted RBP24.58■■□□□ 1.53
CHUK-201ENST00000370397 WASHC2AQ641Q2 1341 aa24.58■■□□□ 1.52
CHUK-201ENST00000370397 ABCA5Q8WWZ7 1642 aa24.57■■□□□ 1.52
CHUK-201ENST00000370397 EHBP1L1Q8N3D4 1523 aa24.55■■□□□ 1.52
CHUK-201ENST00000370397 TCOF1Q13428 1488 aaKnown RBP24.55■■□□□ 1.52
CHUK-201ENST00000370397 AKNAQ7Z591 1439 aa24.48■■□□□ 1.51
CHUK-201ENST00000370397 CNTLNQ9NXG0 1405 aa24.47■■□□□ 1.51
CHUK-201ENST00000370397 URB2Q14146 1524 aaKnown RBP24.46■■□□□ 1.51
CHUK-201ENST00000370397 MTUS2Q5JR59 1369 aa24.46■■□□□ 1.51
CHUK-201ENST00000370397 CCDC184Q52MB2 194 aa24.45■■□□□ 1.5
CHUK-201ENST00000370397 HNRNPUQ00839 825 aaKnown RBP eCLIP24.44■■□□□ 1.5
CHUK-201ENST00000370397 NCOA1Q15788 1441 aa24.44■■□□□ 1.5
CHUK-201ENST00000370397 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
CHUK-201ENST00000370397 HSPA5P11021 654 aaKnown RBP24.42■■□□□ 1.5
CHUK-201ENST00000370397 ERICH6BQ5W0A0 696 aa24.42■■□□□ 1.5
CHUK-201ENST00000370397 MRC2Q9UBG0 1479 aa24.41■■□□□ 1.5
CHUK-201ENST00000370397 IRX6P78412 446 aaPredicted RBP24.39■■□□□ 1.49
CHUK-201ENST00000370397 C11orf95C9JLR9 678 aaPredicted RBP24.38■■□□□ 1.49
CHUK-201ENST00000370397 WDR62O43379 1518 aa24.37■■□□□ 1.49
CHUK-201ENST00000370397 SPATA31E1Q6ZUB1 1445 aa24.36■■□□□ 1.49
CHUK-201ENST00000370397 TEX14Q8IWB6 1497 aa24.36■■□□□ 1.49
CHUK-201ENST00000370397 CCDC7Q96M83 1385 aa24.32■■□□□ 1.48
CHUK-201ENST00000370397 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
CHUK-201ENST00000370397 PRKRIP1Q9H875 184 aaPredicted RBP24.3■■□□□ 1.48
CHUK-201ENST00000370397 PPP4R2Q9NY27 417 aa24.3■■□□□ 1.48
CHUK-201ENST00000370397 CDK11AQ9UQ88 783 aaPredicted RBP24.3■■□□□ 1.48
CHUK-201ENST00000370397 RPRD2Q5VT52 1461 aaKnown RBP24.28■■□□□ 1.48
CHUK-201ENST00000370397 ZBED9Q6R2W3 1325 aa24.28■■□□□ 1.48
CHUK-201ENST00000370397 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms