RNA–Protein interactions for RNA: ENST00000370119.8

VCAM1-204, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 2 BASIC

Gene VCAM1, Length 2,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-204ENST00000370119 IGF1RP08069 1367 aa11.57□□□□□ -0.56
VCAM1-204ENST00000370119 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
VCAM1-204ENST00000370119 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
VCAM1-204ENST00000370119 DDX10Q13206 875 aaKnown RBP11.55□□□□□ -0.56
VCAM1-204ENST00000370119 WDR97A6NE52 1622 aa11.55□□□□□ -0.56
VCAM1-204ENST00000370119 ANP32EQ9BTT0 268 aa11.54□□□□□ -0.56
VCAM1-204ENST00000370119 SIN3AQ96ST3 1273 aa11.53□□□□□ -0.56
VCAM1-204ENST00000370119 PHLDB1Q86UU1 1377 aa11.53□□□□□ -0.56
VCAM1-204ENST00000370119 PPP1R15AO75807 674 aaPredicted RBP11.53□□□□□ -0.56
VCAM1-204ENST00000370119 FKBP8Q14318 412 aa11.52□□□□□ -0.57
VCAM1-204ENST00000370119 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
VCAM1-204ENST00000370119 FAM50AQ14320 339 aaKnown RBP11.51□□□□□ -0.57
VCAM1-204ENST00000370119 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
VCAM1-204ENST00000370119 FHAD1B1AJZ9 1412 aa11.5□□□□□ -0.57
VCAM1-204ENST00000370119 CCER2I3L3R5 266 aa11.5□□□□□ -0.57
VCAM1-204ENST00000370119 BCANQ96GW7 911 aa11.49□□□□□ -0.57
VCAM1-204ENST00000370119 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
VCAM1-204ENST00000370119 NEFLP07196 543 aa11.47□□□□□ -0.57
VCAM1-204ENST00000370119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.57
VCAM1-204ENST00000370119 ANP32CO43423 234 aa11.46□□□□□ -0.58
VCAM1-204ENST00000370119 PCF11O94913 1555 aaKnown RBP11.45□□□□□ -0.58
VCAM1-204ENST00000370119 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
VCAM1-204ENST00000370119 CADPSQ9ULU8 1353 aa11.43□□□□□ -0.58
VCAM1-204ENST00000370119 P3H3Q8IVL6 736 aa11.43□□□□□ -0.58
VCAM1-204ENST00000370119 ATP1B4Q9UN42 357 aaPredicted RBP11.43□□□□□ -0.58
VCAM1-204ENST00000370119 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
VCAM1-204ENST00000370119 FYCO1Q9BQS8 1478 aa11.41□□□□□ -0.58
VCAM1-204ENST00000370119 TRIM52Q96A61 297 aa11.41□□□□□ -0.58
VCAM1-204ENST00000370119 CASKIN1Q8WXD9 1431 aa11.4□□□□□ -0.58
VCAM1-204ENST00000370119 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
VCAM1-204ENST00000370119 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
VCAM1-204ENST00000370119 TONSLQ96HA7 1378 aa11.39□□□□□ -0.59
VCAM1-204ENST00000370119 EFCAB5A4FU69 1503 aa11.39□□□□□ -0.59
VCAM1-204ENST00000370119 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
VCAM1-204ENST00000370119 FGD6Q6ZV73 1430 aa11.37□□□□□ -0.59
VCAM1-204ENST00000370119 ERCC6Q03468 1493 aa11.36□□□□□ -0.59
VCAM1-204ENST00000370119 CCDC18Q5T9S5 1454 aa11.36□□□□□ -0.59
VCAM1-204ENST00000370119 UACAQ9BZF9 1416 aa11.35□□□□□ -0.59
VCAM1-204ENST00000370119 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
VCAM1-204ENST00000370119 FMN1Q68DA7 1419 aa11.33□□□□□ -0.6
VCAM1-204ENST00000370119 ABCA10Q8WWZ4 1543 aa11.32□□□□□ -0.6
VCAM1-204ENST00000370119 PTPN23Q9H3S7 1636 aa11.32□□□□□ -0.6
VCAM1-204ENST00000370119 PTPRKQ15262 1439 aa11.32□□□□□ -0.6
VCAM1-204ENST00000370119 CTTNBP2Q8WZ74 1663 aa11.31□□□□□ -0.6
VCAM1-204ENST00000370119 CUL7Q14999 1698 aa11.31□□□□□ -0.6
VCAM1-204ENST00000370119 MTUS2Q5JR59 1369 aa11.31□□□□□ -0.6
VCAM1-204ENST00000370119 FANCD2Q9BXW9 1451 aa11.31□□□□□ -0.6
VCAM1-204ENST00000370119 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
VCAM1-204ENST00000370119 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
VCAM1-204ENST00000370119 SNAPC4Q5SXM2 1469 aa11.3□□□□□ -0.6
VCAM1-204ENST00000370119 AEBP2Q6ZN18 517 aaPredicted RBP11.3□□□□□ -0.6
VCAM1-204ENST00000370119 THOC2Q8NI27 1593 aaKnown RBP11.3□□□□□ -0.6
VCAM1-204ENST00000370119 NAIPQ13075 1403 aa11.29□□□□□ -0.6
VCAM1-204ENST00000370119 HNRNPUQ00839 825 aaKnown RBP eCLIP11.29□□□□□ -0.6
VCAM1-204ENST00000370119 KDM5BQ9UGL1 1544 aa11.28□□□□□ -0.6
VCAM1-204ENST00000370119 POLA1P09884 1462 aaPredicted RBP11.27□□□□□ -0.61
VCAM1-204ENST00000370119 MYOM3Q5VTT5 1437 aa11.27□□□□□ -0.61
VCAM1-204ENST00000370119 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
VCAM1-204ENST00000370119 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
VCAM1-204ENST00000370119 NCOA2Q15596 1464 aa11.26□□□□□ -0.61
VCAM1-204ENST00000370119 ERICH6BQ5W0A0 696 aa11.26□□□□□ -0.61
VCAM1-204ENST00000370119 CDK11AQ9UQ88 783 aaPredicted RBP11.26□□□□□ -0.61
VCAM1-204ENST00000370119 FANCIQ9NVI1 1328 aa11.25□□□□□ -0.61
VCAM1-204ENST00000370119 MSH5O43196 834 aa11.25□□□□□ -0.61
VCAM1-204ENST00000370119 HSPA5P11021 654 aaKnown RBP11.24□□□□□ -0.61
VCAM1-204ENST00000370119 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
VCAM1-204ENST00000370119 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
VCAM1-204ENST00000370119 SUPT6HQ7KZ85 1726 aaKnown RBP11.24□□□□□ -0.61
VCAM1-204ENST00000370119 GRIN2BQ13224 1484 aa11.23□□□□□ -0.61
VCAM1-204ENST00000370119 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
VCAM1-204ENST00000370119 LRRIQ1Q96JM4 1722 aa11.23□□□□□ -0.61
VCAM1-204ENST00000370119 EHBP1L1Q8N3D4 1523 aa11.22□□□□□ -0.61
VCAM1-204ENST00000370119 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
VCAM1-204ENST00000370119 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.61
VCAM1-204ENST00000370119 UGGT2Q9NYU1 1516 aa11.2□□□□□ -0.62
VCAM1-204ENST00000370119 PPP4R2Q9NY27 417 aa11.2□□□□□ -0.62
VCAM1-204ENST00000370119 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
VCAM1-204ENST00000370119 ARHGEF11O15085 1522 aa11.19□□□□□ -0.62
VCAM1-204ENST00000370119 CNTLNQ9NXG0 1405 aa11.19□□□□□ -0.62
VCAM1-204ENST00000370119 HECW1Q76N89 1606 aa11.19□□□□□ -0.62
VCAM1-204ENST00000370119 TCOF1Q13428 1488 aaKnown RBP11.19□□□□□ -0.62
VCAM1-204ENST00000370119 GCC2Q8IWJ2 1684 aa11.18□□□□□ -0.62
VCAM1-204ENST00000370119 DENND4BO75064 1496 aaPredicted RBP11.18□□□□□ -0.62
VCAM1-204ENST00000370119 AKNAQ7Z591 1439 aa11.17□□□□□ -0.62
VCAM1-204ENST00000370119 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
VCAM1-204ENST00000370119 CCDC184Q52MB2 194 aa11.16□□□□□ -0.62
VCAM1-204ENST00000370119 ERICH6Q7L0X2 663 aa11.16□□□□□ -0.62
VCAM1-204ENST00000370119 MPHOSPH9Q99550 1183 aa11.16□□□□□ -0.62
VCAM1-204ENST00000370119 PRKRIP1Q9H875 184 aaPredicted RBP11.15□□□□□ -0.62
VCAM1-204ENST00000370119 ABCA5Q8WWZ7 1642 aa11.15□□□□□ -0.62
VCAM1-204ENST00000370119 MAGI3Q5TCQ9 1506 aa11.15□□□□□ -0.62
VCAM1-204ENST00000370119 NCOA1Q15788 1441 aa11.15□□□□□ -0.62
VCAM1-204ENST00000370119 CCDC7Q96M83 1385 aa11.15□□□□□ -0.62
VCAM1-204ENST00000370119 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
VCAM1-204ENST00000370119 L3MBTL2Q969R5 705 aa11.15□□□□□ -0.62
VCAM1-204ENST00000370119 TDRD9Q8NDG6 1382 aaKnown RBP11.14□□□□□ -0.63
VCAM1-204ENST00000370119 NESP48681 1621 aa11.14□□□□□ -0.63
VCAM1-204ENST00000370119 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
VCAM1-204ENST00000370119 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
VCAM1-204ENST00000370119 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms