RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
SFR1-202ENST00000369729 CUL7Q14999 1698 aa14.31□□□□□ -0.12
SFR1-202ENST00000369729 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
SFR1-202ENST00000369729 KIF21BO75037 1637 aa14.28□□□□□ -0.12
SFR1-202ENST00000369729 GOLGA3Q08378 1498 aa14.28□□□□□ -0.12
SFR1-202ENST00000369729 PRXQ9BXM0 1461 aa14.28□□□□□ -0.12
SFR1-202ENST00000369729 MAGI1Q96QZ7 1491 aaPredicted RBP14.27□□□□□ -0.12
SFR1-202ENST00000369729 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.12
SFR1-202ENST00000369729 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.13
SFR1-202ENST00000369729 UBTFP17480 764 aaKnown RBP14.25□□□□□ -0.13
SFR1-202ENST00000369729 SNAPC4Q5SXM2 1469 aa14.24□□□□□ -0.13
SFR1-202ENST00000369729 LOC105371045A0A1W2PR82 267 aa14.22□□□□□ -0.13
SFR1-202ENST00000369729 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
SFR1-202ENST00000369729 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
SFR1-202ENST00000369729 ADAMTS12P58397 1594 aa14.21□□□□□ -0.14
SFR1-202ENST00000369729 SYNJ2O15056 1496 aa14.2□□□□□ -0.14
SFR1-202ENST00000369729 FBLN2P98095 1184 aa14.19□□□□□ -0.14
SFR1-202ENST00000369729 TNIKQ9UKE5 1360 aa14.18□□□□□ -0.14
SFR1-202ENST00000369729 GRIN2AQ12879 1464 aa14.14□□□□□ -0.15
SFR1-202ENST00000369729 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
SFR1-202ENST00000369729 KIAA0586Q9BVV6 1533 aa14.06□□□□□ -0.16
SFR1-202ENST00000369729 CTTNBP2Q8WZ74 1663 aa14.05□□□□□ -0.16
SFR1-202ENST00000369729 NUP160Q12769 1436 aa14.05□□□□□ -0.16
SFR1-202ENST00000369729 CEP162Q5TB80 1403 aa14.05□□□□□ -0.16
SFR1-202ENST00000369729 POTEHQ6S545 545 aa14.05□□□□□ -0.16
SFR1-202ENST00000369729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
SFR1-202ENST00000369729 CLIP1P30622 1438 aa14.03□□□□□ -0.16
SFR1-202ENST00000369729 CHD1O14646 1710 aa14.03□□□□□ -0.16
SFR1-202ENST00000369729 IQGAP2Q13576 1575 aa14.02□□□□□ -0.16
SFR1-202ENST00000369729 RANGAP1P46060 587 aaPredicted RBP14.01□□□□□ -0.17
SFR1-202ENST00000369729 OSCARQ8IYS5 282 aa14□□□□□ -0.17
SFR1-202ENST00000369729 CEP170Q5SW79 1584 aa14□□□□□ -0.17
SFR1-202ENST00000369729 EFCAB5A4FU69 1503 aa13.98□□□□□ -0.17
SFR1-202ENST00000369729 NPM3O75607 178 aaKnown RBP13.98□□□□□ -0.17
SFR1-202ENST00000369729 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
SFR1-202ENST00000369729 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.17
SFR1-202ENST00000369729 UGGT2Q9NYU1 1516 aa13.95□□□□□ -0.18
SFR1-202ENST00000369729 ARHGAP35Q9NRY4 1499 aa13.91□□□□□ -0.18
SFR1-202ENST00000369729 CLASP1Q7Z460 1538 aa13.9□□□□□ -0.18
SFR1-202ENST00000369729 SAMD9Q5K651 1589 aa13.89□□□□□ -0.19
SFR1-202ENST00000369729 P3H3Q8IVL6 736 aa13.89□□□□□ -0.19
SFR1-202ENST00000369729 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
SFR1-202ENST00000369729 PRG4Q92954 1404 aaPredicted RBP13.88□□□□□ -0.19
SFR1-202ENST00000369729 APLP2Q06481 763 aa13.86□□□□□ -0.19
SFR1-202ENST00000369729 VPS8Q8N3P4 1428 aa13.86□□□□□ -0.19
SFR1-202ENST00000369729 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
SFR1-202ENST00000369729 SHROOM2Q13796 1616 aa13.85□□□□□ -0.19
SFR1-202ENST00000369729 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
SFR1-202ENST00000369729 DISP1Q96F81 1524 aa13.85□□□□□ -0.19
SFR1-202ENST00000369729 ARAP1Q96P48 1450 aa13.85□□□□□ -0.19
SFR1-202ENST00000369729 PTPRGP23470 1445 aa13.8□□□□□ -0.2
SFR1-202ENST00000369729 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
SFR1-202ENST00000369729 TTBK1Q5TCY1 1321 aaPredicted RBP13.78□□□□□ -0.2
SFR1-202ENST00000369729 CASKIN1Q8WXD9 1431 aa13.78□□□□□ -0.2
SFR1-202ENST00000369729 FYCO1Q9BQS8 1478 aa13.77□□□□□ -0.2
SFR1-202ENST00000369729 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
SFR1-202ENST00000369729 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
SFR1-202ENST00000369729 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
SFR1-202ENST00000369729 PCF11O94913 1555 aaKnown RBP13.71□□□□□ -0.22
SFR1-202ENST00000369729 UACAQ9BZF9 1416 aa13.7□□□□□ -0.22
SFR1-202ENST00000369729 RAPGEF6Q8TEU7 1601 aa13.7□□□□□ -0.22
SFR1-202ENST00000369729 CDK11AQ9UQ88 783 aaPredicted RBP13.7□□□□□ -0.22
SFR1-202ENST00000369729 MAP3K1Q13233 1512 aa13.7□□□□□ -0.22
SFR1-202ENST00000369729 ERCC6L2Q5T890 1561 aa13.69□□□□□ -0.22
SFR1-202ENST00000369729 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
SFR1-202ENST00000369729 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
SFR1-202ENST00000369729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
SFR1-202ENST00000369729 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
SFR1-202ENST00000369729 PLB1Q6P1J6 1458 aa13.67□□□□□ -0.22
SFR1-202ENST00000369729 ABCA8O94911 1581 aa13.67□□□□□ -0.22
SFR1-202ENST00000369729 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
SFR1-202ENST00000369729 UHRF1BP1LA0JNW5 1464 aa13.65□□□□□ -0.22
SFR1-202ENST00000369729 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
SFR1-202ENST00000369729 ABCC2Q92887 1545 aa13.64□□□□□ -0.23
SFR1-202ENST00000369729 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
SFR1-202ENST00000369729 NUP153P49790 1475 aaKnown RBP13.64□□□□□ -0.23
SFR1-202ENST00000369729 DSG3P32926 999 aa13.64□□□□□ -0.23
SFR1-202ENST00000369729 MTUS2Q5JR59 1369 aa13.62□□□□□ -0.23
SFR1-202ENST00000369729 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
SFR1-202ENST00000369729 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
SFR1-202ENST00000369729 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
SFR1-202ENST00000369729 PLEKHD1A6NEE1 506 aa13.61□□□□□ -0.23
SFR1-202ENST00000369729 CFAP43Q8NDM7 1665 aa13.61□□□□□ -0.23
SFR1-202ENST00000369729 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
SFR1-202ENST00000369729 CAPN15O75808 1086 aa13.6□□□□□ -0.23
SFR1-202ENST00000369729 CYB5RLQ6IPT4 315 aa13.59□□□□□ -0.23
SFR1-202ENST00000369729 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
SFR1-202ENST00000369729 ATP10BO94823 1461 aa13.58□□□□□ -0.24
SFR1-202ENST00000369729 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
SFR1-202ENST00000369729 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
SFR1-202ENST00000369729 KDM5BQ9UGL1 1544 aa13.57□□□□□ -0.24
SFR1-202ENST00000369729 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
SFR1-202ENST00000369729 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
SFR1-202ENST00000369729 TROQ12816 1431 aaPredicted RBP13.54□□□□□ -0.24
SFR1-202ENST00000369729 ADCY10Q96PN6 1610 aa13.54□□□□□ -0.24
SFR1-202ENST00000369729 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
SFR1-202ENST00000369729 DNAJC5Q9H3Z4 198 aa13.52□□□□□ -0.25
SFR1-202ENST00000369729 ZCCHC11Q5TAX3 1644 aaKnown RBP13.51□□□□□ -0.25
SFR1-202ENST00000369729 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
SFR1-202ENST00000369729 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms