RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.55
CAPN8-201ENST00000366872 CADPSQ9ULU8 1353 aa18.48■□□□□ 0.55
CAPN8-201ENST00000366872 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
CAPN8-201ENST00000366872 RANGAP1P46060 587 aaPredicted RBP18.48■□□□□ 0.55
CAPN8-201ENST00000366872 CARMIL1Q5VZK9 1371 aa18.48■□□□□ 0.55
CAPN8-201ENST00000366872 FGD5Q6ZNL6 1462 aa18.47■□□□□ 0.55
CAPN8-201ENST00000366872 CUL7Q14999 1698 aa18.45■□□□□ 0.54
CAPN8-201ENST00000366872 PCF11O94913 1555 aaKnown RBP18.45■□□□□ 0.54
CAPN8-201ENST00000366872 FYCO1Q9BQS8 1478 aa18.45■□□□□ 0.54
CAPN8-201ENST00000366872 CTTNBP2Q8WZ74 1663 aa18.44■□□□□ 0.54
CAPN8-201ENST00000366872 SUPT16HQ9Y5B9 1047 aaKnown RBP18.41■□□□□ 0.54
CAPN8-201ENST00000366872 DNMBPQ6XZF7 1577 aa18.4■□□□□ 0.54
CAPN8-201ENST00000366872 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.53
CAPN8-201ENST00000366872 PHLDB1Q86UU1 1377 aa18.39■□□□□ 0.53
CAPN8-201ENST00000366872 CASKIN1Q8WXD9 1431 aa18.37■□□□□ 0.53
CAPN8-201ENST00000366872 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
CAPN8-201ENST00000366872 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
CAPN8-201ENST00000366872 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
CAPN8-201ENST00000366872 FANCD2Q9BXW9 1451 aa18.29■□□□□ 0.52
CAPN8-201ENST00000366872 SAMD9Q5K651 1589 aa18.27■□□□□ 0.52
CAPN8-201ENST00000366872 FMN1Q68DA7 1419 aa18.27■□□□□ 0.51
CAPN8-201ENST00000366872 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
CAPN8-201ENST00000366872 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
CAPN8-201ENST00000366872 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
CAPN8-201ENST00000366872 PPP1R15AO75807 674 aaPredicted RBP18.23■□□□□ 0.51
CAPN8-201ENST00000366872 POLA1P09884 1462 aaPredicted RBP18.23■□□□□ 0.51
CAPN8-201ENST00000366872 FGD6Q6ZV73 1430 aa18.22■□□□□ 0.51
CAPN8-201ENST00000366872 HFM1A2PYH4 1435 aa18.21■□□□□ 0.51
CAPN8-201ENST00000366872 PTPN23Q9H3S7 1636 aa18.2■□□□□ 0.5
CAPN8-201ENST00000366872 LRRIQ1Q96JM4 1722 aa18.2■□□□□ 0.5
CAPN8-201ENST00000366872 ABCA5Q8WWZ7 1642 aa18.19■□□□□ 0.5
CAPN8-201ENST00000366872 ITGAEP38570 1179 aa18.19■□□□□ 0.5
CAPN8-201ENST00000366872 FHOD3Q2V2M9 1422 aa18.19■□□□□ 0.5
CAPN8-201ENST00000366872 UACAQ9BZF9 1416 aa18.19■□□□□ 0.5
CAPN8-201ENST00000366872 SUPT6HQ7KZ85 1726 aaKnown RBP18.18■□□□□ 0.5
CAPN8-201ENST00000366872 CCDC18Q5T9S5 1454 aa18.16■□□□□ 0.5
CAPN8-201ENST00000366872 TSHZ2Q9NRE2 1034 aa18.16■□□□□ 0.5
CAPN8-201ENST00000366872 EHBP1L1Q8N3D4 1523 aa18.15■□□□□ 0.5
CAPN8-201ENST00000366872 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
CAPN8-201ENST00000366872 ARHGEF11O15085 1522 aa18.15■□□□□ 0.5
CAPN8-201ENST00000366872 GCC2Q8IWJ2 1684 aa18.15■□□□□ 0.5
CAPN8-201ENST00000366872 GRIN2BQ13224 1484 aa18.14■□□□□ 0.49
CAPN8-201ENST00000366872 FAM50AQ14320 339 aaKnown RBP18.14■□□□□ 0.49
CAPN8-201ENST00000366872 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
CAPN8-201ENST00000366872 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
CAPN8-201ENST00000366872 MYOM3Q5VTT5 1437 aa18.11■□□□□ 0.49
CAPN8-201ENST00000366872 AKNAQ7Z591 1439 aa18.11■□□□□ 0.49
CAPN8-201ENST00000366872 HECW1Q76N89 1606 aa18.11■□□□□ 0.49
CAPN8-201ENST00000366872 KDM5BQ9UGL1 1544 aa18.09■□□□□ 0.49
CAPN8-201ENST00000366872 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
CAPN8-201ENST00000366872 TCOF1Q13428 1488 aaKnown RBP18.08■□□□□ 0.49
CAPN8-201ENST00000366872 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.49
CAPN8-201ENST00000366872 NAIPQ13075 1403 aa18.07■□□□□ 0.48
CAPN8-201ENST00000366872 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
CAPN8-201ENST00000366872 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
CAPN8-201ENST00000366872 TONSLQ96HA7 1378 aa18.06■□□□□ 0.48
CAPN8-201ENST00000366872 ANP32CO43423 234 aa18.04■□□□□ 0.48
CAPN8-201ENST00000366872 PTPRKQ15262 1439 aa18.04■□□□□ 0.48
CAPN8-201ENST00000366872 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
CAPN8-201ENST00000366872 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
CAPN8-201ENST00000366872 GAPVD1Q14C86 1478 aa17.99■□□□□ 0.47
CAPN8-201ENST00000366872 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
CAPN8-201ENST00000366872 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
CAPN8-201ENST00000366872 NEFLP07196 543 aa17.97■□□□□ 0.47
CAPN8-201ENST00000366872 P3H3Q8IVL6 736 aa17.97■□□□□ 0.47
CAPN8-201ENST00000366872 TARBP1Q13395 1621 aaKnown RBP17.95■□□□□ 0.46
CAPN8-201ENST00000366872 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
CAPN8-201ENST00000366872 FKBP8Q14318 412 aa17.95■□□□□ 0.46
CAPN8-201ENST00000366872 NESP48681 1621 aa17.94■□□□□ 0.46
CAPN8-201ENST00000366872 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
CAPN8-201ENST00000366872 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
CAPN8-201ENST00000366872 DENND4BO75064 1496 aaPredicted RBP17.9■□□□□ 0.46
CAPN8-201ENST00000366872 ATP1B4Q9UN42 357 aaPredicted RBP17.9■□□□□ 0.46
CAPN8-201ENST00000366872 ERICH6BQ5W0A0 696 aa17.89■□□□□ 0.45
CAPN8-201ENST00000366872 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.45
CAPN8-201ENST00000366872 IQGAP2Q13576 1575 aa17.88■□□□□ 0.45
CAPN8-201ENST00000366872 WDR62O43379 1518 aa17.86■□□□□ 0.45
CAPN8-201ENST00000366872 EPRSP07814 1512 aaKnown RBP17.86■□□□□ 0.45
CAPN8-201ENST00000366872 ADAMTS12P58397 1594 aa17.85■□□□□ 0.45
CAPN8-201ENST00000366872 ROCK1Q13464 1354 aa17.84■□□□□ 0.45
CAPN8-201ENST00000366872 CNTLNQ9NXG0 1405 aa17.83■□□□□ 0.44
CAPN8-201ENST00000366872 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.44
CAPN8-201ENST00000366872 KDM6BO15054 1643 aa17.81■□□□□ 0.44
CAPN8-201ENST00000366872 TDRD9Q8NDG6 1382 aaKnown RBP17.8■□□□□ 0.44
CAPN8-201ENST00000366872 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
CAPN8-201ENST00000366872 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
CAPN8-201ENST00000366872 RBM19Q9Y4C8 960 aaKnown RBP17.79■□□□□ 0.44
CAPN8-201ENST00000366872 RPRD2Q5VT52 1461 aaKnown RBP17.78■□□□□ 0.44
CAPN8-201ENST00000366872 WASHC2AQ641Q2 1341 aa17.77■□□□□ 0.44
CAPN8-201ENST00000366872 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.44
CAPN8-201ENST00000366872 BCANQ96GW7 911 aa17.77■□□□□ 0.43
CAPN8-201ENST00000366872 EIF4G2P78344 907 aaKnown RBP eCLIP17.76■□□□□ 0.43
CAPN8-201ENST00000366872 TEX14Q8IWB6 1497 aa17.75■□□□□ 0.43
CAPN8-201ENST00000366872 HSPA5P11021 654 aaKnown RBP17.74■□□□□ 0.43
CAPN8-201ENST00000366872 ADGBQ8N7X0 1667 aa17.74■□□□□ 0.43
CAPN8-201ENST00000366872 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
CAPN8-201ENST00000366872 ANKRD30BQ9BXX2 1392 aa17.72■□□□□ 0.43
CAPN8-201ENST00000366872 DAPK1P53355 1430 aa17.72■□□□□ 0.43
CAPN8-201ENST00000366872 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
CAPN8-201ENST00000366872 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms