RNA–Protein interactions for RNA: ENST00000360115.8

MACF1-202, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-202ENST00000360115 ITGAEP38570 1179 aa19.09■□□□□ 0.65
MACF1-202ENST00000360115 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
MACF1-202ENST00000360115 CFAP43Q8NDM7 1665 aa19.06■□□□□ 0.64
MACF1-202ENST00000360115 TIMELESSQ9UNS1 1208 aa19.06■□□□□ 0.64
MACF1-202ENST00000360115 IGF1RP08069 1367 aa19.03■□□□□ 0.64
MACF1-202ENST00000360115 PHLDB1Q86UU1 1377 aa19.02■□□□□ 0.64
MACF1-202ENST00000360115 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
MACF1-202ENST00000360115 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
MACF1-202ENST00000360115 DDX10Q13206 875 aaKnown RBP18.99■□□□□ 0.63
MACF1-202ENST00000360115 CCER2I3L3R5 266 aa18.98■□□□□ 0.63
MACF1-202ENST00000360115 FKBP8Q14318 412 aa18.98■□□□□ 0.63
MACF1-202ENST00000360115 PCF11O94913 1555 aaKnown RBP18.96■□□□□ 0.63
MACF1-202ENST00000360115 CARMIL1Q5VZK9 1371 aa18.95■□□□□ 0.62
MACF1-202ENST00000360115 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
MACF1-202ENST00000360115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.62
MACF1-202ENST00000360115 BCANQ96GW7 911 aa18.93■□□□□ 0.62
MACF1-202ENST00000360115 NEFLP07196 543 aa18.92■□□□□ 0.62
MACF1-202ENST00000360115 FAM50AQ14320 339 aaKnown RBP18.9■□□□□ 0.62
MACF1-202ENST00000360115 FYCO1Q9BQS8 1478 aa18.88■□□□□ 0.61
MACF1-202ENST00000360115 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
MACF1-202ENST00000360115 ANP32CO43423 234 aa18.87■□□□□ 0.61
MACF1-202ENST00000360115 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.613e-7■■■■□ 20.3
MACF1-202ENST00000360115 EFCAB5A4FU69 1503 aa18.86■□□□□ 0.61
MACF1-202ENST00000360115 RBM19Q9Y4C8 960 aaKnown RBP18.83■□□□□ 0.6
MACF1-202ENST00000360115 CASKIN1Q8WXD9 1431 aa18.82■□□□□ 0.6
MACF1-202ENST00000360115 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
MACF1-202ENST00000360115 TRIM52Q96A61 297 aa18.78■□□□□ 0.6
MACF1-202ENST00000360115 TONSLQ96HA7 1378 aa18.77■□□□□ 0.6
MACF1-202ENST00000360115 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.6
MACF1-202ENST00000360115 FGD6Q6ZV73 1430 aa18.77■□□□□ 0.6
MACF1-202ENST00000360115 CCDC18Q5T9S5 1454 aa18.77■□□□□ 0.6
MACF1-202ENST00000360115 UACAQ9BZF9 1416 aa18.76■□□□□ 0.59
MACF1-202ENST00000360115 HFM1A2PYH4 1435 aa18.75■□□□□ 0.59
MACF1-202ENST00000360115 HIRIP3Q9BW71 556 aaPredicted RBP18.75■□□□□ 0.59
MACF1-202ENST00000360115 PTPN23Q9H3S7 1636 aa18.74■□□□□ 0.59
MACF1-202ENST00000360115 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
MACF1-202ENST00000360115 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
MACF1-202ENST00000360115 CUL7Q14999 1698 aa18.72■□□□□ 0.59
MACF1-202ENST00000360115 BCL11AQ9H165 835 aa18.71■□□□□ 0.59
MACF1-202ENST00000360115 P3H3Q8IVL6 736 aa18.7■□□□□ 0.58
MACF1-202ENST00000360115 FMN1Q68DA7 1419 aa18.7■□□□□ 0.58
MACF1-202ENST00000360115 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
MACF1-202ENST00000360115 KDM5BQ9UGL1 1544 aa18.69■□□□□ 0.58
MACF1-202ENST00000360115 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
MACF1-202ENST00000360115 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
MACF1-202ENST00000360115 PTPRKQ15262 1439 aa18.66■□□□□ 0.58
MACF1-202ENST00000360115 DNMBPQ6XZF7 1577 aa18.66■□□□□ 0.58
MACF1-202ENST00000360115 NAIPQ13075 1403 aa18.65■□□□□ 0.58
MACF1-202ENST00000360115 FANCIQ9NVI1 1328 aa18.64■□□□□ 0.57
MACF1-202ENST00000360115 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
MACF1-202ENST00000360115 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
MACF1-202ENST00000360115 MTUS2Q5JR59 1369 aa18.62■□□□□ 0.57
MACF1-202ENST00000360115 MYOM3Q5VTT5 1437 aa18.61■□□□□ 0.57
MACF1-202ENST00000360115 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
MACF1-202ENST00000360115 ERICH6BQ5W0A0 696 aa18.6■□□□□ 0.57
MACF1-202ENST00000360115 MSH5O43196 834 aa18.59■□□□□ 0.57
MACF1-202ENST00000360115 LRRIQ1Q96JM4 1722 aa18.59■□□□□ 0.57
MACF1-202ENST00000360115 POLA1P09884 1462 aaPredicted RBP18.59■□□□□ 0.57
MACF1-202ENST00000360115 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
MACF1-202ENST00000360115 RAD54L2Q9Y4B4 1467 aa18.59■□□□□ 0.57
MACF1-202ENST00000360115 HNRNPUQ00839 825 aaKnown RBP eCLIP18.59■□□□□ 0.57
MACF1-202ENST00000360115 SUPT6HQ7KZ85 1726 aaKnown RBP18.58■□□□□ 0.57
MACF1-202ENST00000360115 EHBP1L1Q8N3D4 1523 aa18.58■□□□□ 0.56
MACF1-202ENST00000360115 HECW1Q76N89 1606 aa18.57■□□□□ 0.56
MACF1-202ENST00000360115 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
MACF1-202ENST00000360115 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
MACF1-202ENST00000360115 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
MACF1-202ENST00000360115 GCC2Q8IWJ2 1684 aa18.56■□□□□ 0.56
MACF1-202ENST00000360115 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
MACF1-202ENST00000360115 WASHC2AQ641Q2 1341 aa18.53■□□□□ 0.56
MACF1-202ENST00000360115 UGGT2Q9NYU1 1516 aa18.53■□□□□ 0.56
MACF1-202ENST00000360115 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
MACF1-202ENST00000360115 KIF21AQ7Z4S6 1674 aa18.52■□□□□ 0.55
MACF1-202ENST00000360115 AKNAQ7Z591 1439 aa18.52■□□□□ 0.55
MACF1-202ENST00000360115 TCOF1Q13428 1488 aaKnown RBP18.51■□□□□ 0.55
MACF1-202ENST00000360115 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
MACF1-202ENST00000360115 DENND4BO75064 1496 aaPredicted RBP18.49■□□□□ 0.55
MACF1-202ENST00000360115 PPP4R2Q9NY27 417 aa18.48■□□□□ 0.55
MACF1-202ENST00000360115 EIF4G2P78344 907 aaKnown RBP eCLIP18.45■□□□□ 0.54
MACF1-202ENST00000360115 IRX6P78412 446 aaPredicted RBP18.45■□□□□ 0.54
MACF1-202ENST00000360115 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
MACF1-202ENST00000360115 NCOA1Q15788 1441 aa18.44■□□□□ 0.54
MACF1-202ENST00000360115 MAGI3Q5TCQ9 1506 aa18.43■□□□□ 0.54
MACF1-202ENST00000360115 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
MACF1-202ENST00000360115 PRKCSHP14314 528 aaPredicted RBP18.41■□□□□ 0.54
MACF1-202ENST00000360115 CCDC7Q96M83 1385 aa18.4■□□□□ 0.54
MACF1-202ENST00000360115 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
MACF1-202ENST00000360115 KDM6BO15054 1643 aa18.4■□□□□ 0.54
MACF1-202ENST00000360115 MYT1LQ9UL68 1186 aa18.39■□□□□ 0.53
MACF1-202ENST00000360115 POLR1AO95602 1720 aaPredicted RBP18.39■□□□□ 0.53
MACF1-202ENST00000360115 PRKRIP1Q9H875 184 aaPredicted RBP18.39■□□□□ 0.53
MACF1-202ENST00000360115 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
MACF1-202ENST00000360115 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
MACF1-202ENST00000360115 MIA2Q96PC5 1412 aa18.37■□□□□ 0.53
MACF1-202ENST00000360115 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
MACF1-202ENST00000360115 URB2Q14146 1524 aaKnown RBP18.34■□□□□ 0.53
MACF1-202ENST00000360115 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.53
MACF1-202ENST00000360115 L3MBTL2Q969R5 705 aa18.33■□□□□ 0.52
MACF1-202ENST00000360115 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
MACF1-202ENST00000360115 LAMC3Q9Y6N6 1575 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms