RNA–Protein interactions for RNA: ENST00000359875.9

HHLA3-201, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-201ENST00000359875 URB2Q14146 1524 aaKnown RBP12.4□□□□□ -0.42
HHLA3-201ENST00000359875 PRDM2Q13029 1718 aa12.4□□□□□ -0.43
HHLA3-201ENST00000359875 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
HHLA3-201ENST00000359875 CCDC88BA6NC98 1476 aa12.38□□□□□ -0.43
HHLA3-201ENST00000359875 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
HHLA3-201ENST00000359875 MKRN4PQ13434 485 aaPredicted RBP12.35□□□□□ -0.43
HHLA3-201ENST00000359875 ABCC8Q09428 1581 aa12.34□□□□□ -0.43
HHLA3-201ENST00000359875 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
HHLA3-201ENST00000359875 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
HHLA3-201ENST00000359875 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
HHLA3-201ENST00000359875 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
HHLA3-201ENST00000359875 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
HHLA3-201ENST00000359875 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
HHLA3-201ENST00000359875 ZNF608Q9ULD9 1512 aaPredicted RBP12.22□□□□□ -0.45
HHLA3-201ENST00000359875 EIF4G3O43432 1585 aaKnown RBP12.19□□□□□ -0.46
HHLA3-201ENST00000359875 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
HHLA3-201ENST00000359875 SPDYE1Q8NFV5 336 aaPredicted RBP12.18□□□□□ -0.46
HHLA3-201ENST00000359875 TARBP1Q13395 1621 aaKnown RBP12.17□□□□□ -0.46
HHLA3-201ENST00000359875 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
HHLA3-201ENST00000359875 WDR97A6NE52 1622 aa12.15□□□□□ -0.47
HHLA3-201ENST00000359875 AQRO60306 1485 aaKnown RBP eCLIP12.12□□□□□ -0.47
HHLA3-201ENST00000359875 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
HHLA3-201ENST00000359875 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
HHLA3-201ENST00000359875 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
HHLA3-201ENST00000359875 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
HHLA3-201ENST00000359875 SOGA1O94964 1423 aa12.11□□□□□ -0.47
HHLA3-201ENST00000359875 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
HHLA3-201ENST00000359875 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
HHLA3-201ENST00000359875 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
HHLA3-201ENST00000359875 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.48
HHLA3-201ENST00000359875 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
HHLA3-201ENST00000359875 CHD1O14646 1710 aa12.06□□□□□ -0.48
HHLA3-201ENST00000359875 CUX1P39880 1505 aa12.05□□□□□ -0.48
HHLA3-201ENST00000359875 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
HHLA3-201ENST00000359875 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
HHLA3-201ENST00000359875 GRIN2BQ13224 1484 aa12.02□□□□□ -0.48
HHLA3-201ENST00000359875 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
HHLA3-201ENST00000359875 SYNJ2O15056 1496 aa11.99□□□□□ -0.49
HHLA3-201ENST00000359875 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
HHLA3-201ENST00000359875 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
HHLA3-201ENST00000359875 CYB5RLQ6IPT4 315 aa11.98□□□□□ -0.49
HHLA3-201ENST00000359875 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
HHLA3-201ENST00000359875 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
HHLA3-201ENST00000359875 ARAP1Q96P48 1450 aa11.97□□□□□ -0.49
HHLA3-201ENST00000359875 GAPVD1Q14C86 1478 aa11.96□□□□□ -0.49
HHLA3-201ENST00000359875 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
HHLA3-201ENST00000359875 SUPT5HO00267 1087 aaKnown RBP11.95□□□□□ -0.5
HHLA3-201ENST00000359875 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
HHLA3-201ENST00000359875 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
HHLA3-201ENST00000359875 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
HHLA3-201ENST00000359875 PBRM1Q86U86 1689 aa11.93□□□□□ -0.5
HHLA3-201ENST00000359875 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
HHLA3-201ENST00000359875 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
HHLA3-201ENST00000359875 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
HHLA3-201ENST00000359875 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
HHLA3-201ENST00000359875 HAX1O00165 279 aa11.86□□□□□ -0.51
HHLA3-201ENST00000359875 GRIN2AQ12879 1464 aa11.86□□□□□ -0.51
HHLA3-201ENST00000359875 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
HHLA3-201ENST00000359875 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
HHLA3-201ENST00000359875 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
HHLA3-201ENST00000359875 NUP160Q12769 1436 aa11.83□□□□□ -0.52
HHLA3-201ENST00000359875 SP7Q8TDD2 431 aaPredicted RBP11.81□□□□□ -0.52
HHLA3-201ENST00000359875 CEP170Q5SW79 1584 aa11.79□□□□□ -0.52
HHLA3-201ENST00000359875 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
HHLA3-201ENST00000359875 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
HHLA3-201ENST00000359875 ERCC6L2Q5T890 1561 aa11.71□□□□□ -0.53
HHLA3-201ENST00000359875 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
HHLA3-201ENST00000359875 PROM2Q8N271 834 aa11.69□□□□□ -0.54
HHLA3-201ENST00000359875 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
HHLA3-201ENST00000359875 PRG4Q92954 1404 aaPredicted RBP11.69□□□□□ -0.54
HHLA3-201ENST00000359875 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
HHLA3-201ENST00000359875 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
HHLA3-201ENST00000359875 FARP1Q9Y4F1 1045 aaPredicted RBP11.67□□□□□ -0.54
HHLA3-201ENST00000359875 CUL7Q14999 1698 aa11.65□□□□□ -0.54
HHLA3-201ENST00000359875 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.55
HHLA3-201ENST00000359875 IGF1RP08069 1367 aa11.64□□□□□ -0.55
HHLA3-201ENST00000359875 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
HHLA3-201ENST00000359875 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
HHLA3-201ENST00000359875 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
HHLA3-201ENST00000359875 EVX2Q03828 476 aa11.58□□□□□ -0.56
HHLA3-201ENST00000359875 ABCC10Q5T3U5 1492 aa11.57□□□□□ -0.56
HHLA3-201ENST00000359875 CARMIL1Q5VZK9 1371 aa11.56□□□□□ -0.56
HHLA3-201ENST00000359875 CLCN6P51797 869 aa11.56□□□□□ -0.56
HHLA3-201ENST00000359875 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
HHLA3-201ENST00000359875 KIF13AQ9H1H9 1805 aa11.55□□□□□ -0.56
HHLA3-201ENST00000359875 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
HHLA3-201ENST00000359875 ADCY10Q96PN6 1610 aa11.53□□□□□ -0.56
HHLA3-201ENST00000359875 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
HHLA3-201ENST00000359875 DIP2BQ9P265 1576 aa11.52□□□□□ -0.57
HHLA3-201ENST00000359875 PTPRGP23470 1445 aa11.52□□□□□ -0.57
HHLA3-201ENST00000359875 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
HHLA3-201ENST00000359875 FAM69CQ0P6D2 419 aa11.51□□□□□ -0.57
HHLA3-201ENST00000359875 FKBP8Q14318 412 aa11.51□□□□□ -0.57
HHLA3-201ENST00000359875 TNIKQ9UKE5 1360 aa11.51□□□□□ -0.57
HHLA3-201ENST00000359875 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
HHLA3-201ENST00000359875 RAPGEF2Q9Y4G8 1499 aa11.48□□□□□ -0.57
HHLA3-201ENST00000359875 ABCC2Q92887 1545 aa11.48□□□□□ -0.57
HHLA3-201ENST00000359875 UHRF1BP1LA0JNW5 1464 aa11.47□□□□□ -0.57
HHLA3-201ENST00000359875 UGGT2Q9NYU1 1516 aa11.45□□□□□ -0.58
HHLA3-201ENST00000359875 GABBR2O75899 941 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms