RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 MAPKBP1O60336 1514 aa29.78■■■□□ 2.36
TRIM3-202ENST00000359518 SETD5Q9C0A6 1442 aa29.77■■■□□ 2.36
TRIM3-202ENST00000359518 TIAM1Q13009 1591 aa29.76■■■□□ 2.35
TRIM3-202ENST00000359518 MYT1Q01538 1121 aa29.75■■■□□ 2.35
TRIM3-202ENST00000359518 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
TRIM3-202ENST00000359518 LRRC9Q6ZRR7 1453 aa29.72■■■□□ 2.35
TRIM3-202ENST00000359518 CADPSQ9ULU8 1353 aa29.7■■■□□ 2.35
TRIM3-202ENST00000359518 BCANQ96GW7 911 aa29.69■■■□□ 2.34
TRIM3-202ENST00000359518 WDR97A6NE52 1622 aa29.64■■■□□ 2.34
TRIM3-202ENST00000359518 FHOD3Q2V2M9 1422 aa29.62■■■□□ 2.33
TRIM3-202ENST00000359518 FHAD1B1AJZ9 1412 aa29.57■■■□□ 2.32
TRIM3-202ENST00000359518 TSHZ2Q9NRE2 1034 aa29.55■■■□□ 2.32
TRIM3-202ENST00000359518 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
TRIM3-202ENST00000359518 PCF11O94913 1555 aaKnown RBP29.53■■■□□ 2.32
TRIM3-202ENST00000359518 RAD54L2Q9Y4B4 1467 aa29.53■■■□□ 2.32
TRIM3-202ENST00000359518 FKBP8Q14318 412 aa29.5■■■□□ 2.31
TRIM3-202ENST00000359518 TRIM52Q96A61 297 aa29.49■■■□□ 2.31
TRIM3-202ENST00000359518 PPP1R15AO75807 674 aaPredicted RBP29.47■■■□□ 2.31
TRIM3-202ENST00000359518 PRDM2Q13029 1718 aa29.47■■■□□ 2.31
TRIM3-202ENST00000359518 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
TRIM3-202ENST00000359518 FANCD2Q9BXW9 1451 aa29.44■■■□□ 2.3
TRIM3-202ENST00000359518 ANP32CO43423 234 aa29.37■■■□□ 2.29
TRIM3-202ENST00000359518 CFAP43Q8NDM7 1665 aa29.36■■■□□ 2.29
TRIM3-202ENST00000359518 TONSLQ96HA7 1378 aa29.34■■■□□ 2.29
TRIM3-202ENST00000359518 TIMELESSQ9UNS1 1208 aa29.32■■■□□ 2.28
TRIM3-202ENST00000359518 MTUS2Q5JR59 1369 aa29.32■■■□□ 2.28
TRIM3-202ENST00000359518 CASKIN1Q8WXD9 1431 aa29.31■■■□□ 2.28
TRIM3-202ENST00000359518 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
TRIM3-202ENST00000359518 NESP48681 1621 aa29.3■■■□□ 2.28
TRIM3-202ENST00000359518 FYCO1Q9BQS8 1478 aa29.3■■■□□ 2.28
TRIM3-202ENST00000359518 FGD6Q6ZV73 1430 aa29.27■■■□□ 2.28
TRIM3-202ENST00000359518 NEFLP07196 543 aa29.25■■■□□ 2.27
TRIM3-202ENST00000359518 PTPRKQ15262 1439 aa29.25■■■□□ 2.27
TRIM3-202ENST00000359518 TOPBP1Q92547 1522 aa29.24■■■□□ 2.27
TRIM3-202ENST00000359518 ABCA10Q8WWZ4 1543 aa29.23■■■□□ 2.27
TRIM3-202ENST00000359518 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
TRIM3-202ENST00000359518 CCDC18Q5T9S5 1454 aa29.22■■■□□ 2.27
TRIM3-202ENST00000359518 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.27
TRIM3-202ENST00000359518 CHIC2Q9UKJ5 165 aa29.2■■■□□ 2.27
TRIM3-202ENST00000359518 CCER2I3L3R5 266 aa29.19■■■□□ 2.26
TRIM3-202ENST00000359518 DNMBPQ6XZF7 1577 aa29.19■■■□□ 2.26
TRIM3-202ENST00000359518 FMN1Q68DA7 1419 aa29.18■■■□□ 2.26
TRIM3-202ENST00000359518 RRP7BPQ9NSQ0 103 aa29.18■■■□□ 2.26
TRIM3-202ENST00000359518 EFCAB5A4FU69 1503 aa29.17■■■□□ 2.26
TRIM3-202ENST00000359518 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.15■■■□□ 2.26
TRIM3-202ENST00000359518 ARID3CA6NKF2 412 aa29.13■■■□□ 2.25
TRIM3-202ENST00000359518 AQRO60306 1485 aaKnown RBP eCLIP29.12■■■□□ 2.256e-6■■■■□ 25.1
TRIM3-202ENST00000359518 SNAPC4Q5SXM2 1469 aa29.1■■■□□ 2.25
TRIM3-202ENST00000359518 UACAQ9BZF9 1416 aa29.09■■■□□ 2.25
TRIM3-202ENST00000359518 HFM1A2PYH4 1435 aa29.09■■■□□ 2.25
TRIM3-202ENST00000359518 NCOA2Q15596 1464 aa29.07■■■□□ 2.24
TRIM3-202ENST00000359518 NAIPQ13075 1403 aa29.06■■■□□ 2.24
TRIM3-202ENST00000359518 CTTNBP2Q8WZ74 1663 aa29.05■■■□□ 2.24
TRIM3-202ENST00000359518 ANP32EQ9BTT0 268 aa29.05■■■□□ 2.24
TRIM3-202ENST00000359518 HNRNPUQ00839 825 aaKnown RBP eCLIP29.04■■■□□ 2.24
TRIM3-202ENST00000359518 IRX6P78412 446 aaPredicted RBP29.04■■■□□ 2.24
TRIM3-202ENST00000359518 PTPN23Q9H3S7 1636 aa29.03■■■□□ 2.24
TRIM3-202ENST00000359518 CUL7Q14999 1698 aa29.03■■■□□ 2.24
TRIM3-202ENST00000359518 MYOM3Q5VTT5 1437 aa29.02■■■□□ 2.24
TRIM3-202ENST00000359518 FOXD1Q16676 465 aa28.98■■■□□ 2.23
TRIM3-202ENST00000359518 RBM19Q9Y4C8 960 aaKnown RBP28.98■■■□□ 2.23
TRIM3-202ENST00000359518 URB2Q14146 1524 aaKnown RBP28.98■■■□□ 2.23
TRIM3-202ENST00000359518 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
TRIM3-202ENST00000359518 LRRIQ1Q96JM4 1722 aa28.94■■■□□ 2.22
TRIM3-202ENST00000359518 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
TRIM3-202ENST00000359518 WASHC2AQ641Q2 1341 aa28.92■■■□□ 2.22
TRIM3-202ENST00000359518 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
TRIM3-202ENST00000359518 CCDC184Q52MB2 194 aa28.86■■■□□ 2.21
TRIM3-202ENST00000359518 MAGI3Q5TCQ9 1506 aa28.85■■■□□ 2.21
TRIM3-202ENST00000359518 SAMD9Q5K651 1589 aa28.85■■■□□ 2.21
TRIM3-202ENST00000359518 SUPT6HQ7KZ85 1726 aaKnown RBP28.84■■■□□ 2.21
TRIM3-202ENST00000359518 KDM5BQ9UGL1 1544 aa28.84■■■□□ 2.21
TRIM3-202ENST00000359518 EIF4G2P78344 907 aaKnown RBP eCLIP28.83■■■□□ 2.21
TRIM3-202ENST00000359518 L3MBTL2Q969R5 705 aa28.83■■■□□ 2.21
TRIM3-202ENST00000359518 MPHOSPH9Q99550 1183 aa28.82■■■□□ 2.2
TRIM3-202ENST00000359518 EHBP1L1Q8N3D4 1523 aa28.8■■■□□ 2.2
TRIM3-202ENST00000359518 C11orf95C9JLR9 678 aaPredicted RBP28.79■■■□□ 2.2
TRIM3-202ENST00000359518 CNGB1Q14028 1251 aaPredicted RBP28.79■■■□□ 2.2
TRIM3-202ENST00000359518 FAM9BQ8IZU0 186 aa28.78■■■□□ 2.2
TRIM3-202ENST00000359518 UGGT2Q9NYU1 1516 aa28.77■■■□□ 2.2
TRIM3-202ENST00000359518 ABCA5Q8WWZ7 1642 aa28.76■■■□□ 2.19
TRIM3-202ENST00000359518 DENND4BO75064 1496 aaPredicted RBP28.76■■■□□ 2.19
TRIM3-202ENST00000359518 KDM6BO15054 1643 aa28.75■■■□□ 2.19
TRIM3-202ENST00000359518 CDK13Q14004 1512 aaKnown RBP28.71■■■□□ 2.19
TRIM3-202ENST00000359518 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
TRIM3-202ENST00000359518 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
TRIM3-202ENST00000359518 NBPF8Q3BBV2 869 aa28.67■■■□□ 2.18
TRIM3-202ENST00000359518 PDS5BQ9NTI5 1447 aa28.66■■■□□ 2.18
TRIM3-202ENST00000359518 MRS2Q9HD23 443 aa28.66■■■□□ 2.18
TRIM3-202ENST00000359518 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
TRIM3-202ENST00000359518 ARHGEF11O15085 1522 aa28.65■■■□□ 2.18
TRIM3-202ENST00000359518 EPRSP07814 1512 aaKnown RBP28.65■■■□□ 2.18
TRIM3-202ENST00000359518 PRKRIP1Q9H875 184 aaPredicted RBP28.63■■■□□ 2.17
TRIM3-202ENST00000359518 CDK11AQ9UQ88 783 aaPredicted RBP28.62■■■□□ 2.17
TRIM3-202ENST00000359518 POLR3GLQ9BT43 218 aa28.61■■■□□ 2.17
TRIM3-202ENST00000359518 MSH5O43196 834 aa28.61■■■□□ 2.17
TRIM3-202ENST00000359518 SLC4A1APQ9BWU0 796 aaKnown RBP28.61■■■□□ 2.17
TRIM3-202ENST00000359518 CNTLNQ9NXG0 1405 aa28.6■■■□□ 2.17
TRIM3-202ENST00000359518 TCOF1Q13428 1488 aaKnown RBP28.6■■■□□ 2.17
TRIM3-202ENST00000359518 CCDC7Q96M83 1385 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms