RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 BCANQ96GW7 911 aa15.61■□□□□ 0.09
RPE-202ENST00000359429 SIN3AQ96ST3 1273 aa15.61■□□□□ 0.09
RPE-202ENST00000359429 DDX10Q13206 875 aaKnown RBP15.6■□□□□ 0.09
RPE-202ENST00000359429 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
RPE-202ENST00000359429 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
RPE-202ENST00000359429 SETD5Q9C0A6 1442 aa15.56■□□□□ 0.08
RPE-202ENST00000359429 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
RPE-202ENST00000359429 PHLDB1Q86UU1 1377 aa15.56■□□□□ 0.08
RPE-202ENST00000359429 FKBP8Q14318 412 aa15.55■□□□□ 0.08
RPE-202ENST00000359429 IGF1RP08069 1367 aa15.55■□□□□ 0.08
RPE-202ENST00000359429 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
RPE-202ENST00000359429 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
RPE-202ENST00000359429 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
RPE-202ENST00000359429 CFTRP13569 1480 aa15.53■□□□□ 0.08
RPE-202ENST00000359429 CC2D2AQ9P2K1 1620 aa15.53■□□□□ 0.08
RPE-202ENST00000359429 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
RPE-202ENST00000359429 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
RPE-202ENST00000359429 LRRC9Q6ZRR7 1453 aa15.51■□□□□ 0.07
RPE-202ENST00000359429 MAP3K1Q13233 1512 aa15.49■□□□□ 0.07
RPE-202ENST00000359429 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
RPE-202ENST00000359429 P3H3Q8IVL6 736 aa15.46■□□□□ 0.07
RPE-202ENST00000359429 TRIM52Q96A61 297 aa15.46■□□□□ 0.07
RPE-202ENST00000359429 ATP1B4Q9UN42 357 aaPredicted RBP15.42■□□□□ 0.06
RPE-202ENST00000359429 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
RPE-202ENST00000359429 CCER2I3L3R5 266 aa15.39■□□□□ 0.05
RPE-202ENST00000359429 RBM19Q9Y4C8 960 aaKnown RBP15.39■□□□□ 0.05
RPE-202ENST00000359429 PCF11O94913 1555 aaKnown RBP15.38■□□□□ 0.05
RPE-202ENST00000359429 ANP32CO43423 234 aa15.38■□□□□ 0.05
RPE-202ENST00000359429 FHAD1B1AJZ9 1412 aa15.37■□□□□ 0.05
RPE-202ENST00000359429 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
RPE-202ENST00000359429 NEFLP07196 543 aa15.36■□□□□ 0.05
RPE-202ENST00000359429 FHOD3Q2V2M9 1422 aa15.35■□□□□ 0.05
RPE-202ENST00000359429 CFAP43Q8NDM7 1665 aa15.34■□□□□ 0.05
RPE-202ENST00000359429 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
RPE-202ENST00000359429 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
RPE-202ENST00000359429 TONSLQ96HA7 1378 aa15.29■□□□□ 0.04
RPE-202ENST00000359429 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
RPE-202ENST00000359429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPE-202ENST00000359429 FYCO1Q9BQS8 1478 aa15.26■□□□□ 0.03
RPE-202ENST00000359429 CASKIN1Q8WXD9 1431 aa15.26■□□□□ 0.03
RPE-202ENST00000359429 FGD6Q6ZV73 1430 aa15.26■□□□□ 0.03
RPE-202ENST00000359429 PRDM2Q13029 1718 aa15.25■□□□□ 0.03
RPE-202ENST00000359429 BCL11AQ9H165 835 aa15.25■□□□□ 0.03
RPE-202ENST00000359429 CCDC18Q5T9S5 1454 aa15.25■□□□□ 0.03
RPE-202ENST00000359429 IRX6P78412 446 aaPredicted RBP15.24■□□□□ 0.03
RPE-202ENST00000359429 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
RPE-202ENST00000359429 UACAQ9BZF9 1416 aa15.22■□□□□ 0.03
RPE-202ENST00000359429 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
RPE-202ENST00000359429 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■□□□ 13.2
RPE-202ENST00000359429 HFM1A2PYH4 1435 aa15.21■□□□□ 0.03
RPE-202ENST00000359429 KDM5BQ9UGL1 1544 aa15.21■□□□□ 0.02
RPE-202ENST00000359429 NAIPQ13075 1403 aa15.19■□□□□ 0.02
RPE-202ENST00000359429 EFCAB5A4FU69 1503 aa15.18■□□□□ 0.02
RPE-202ENST00000359429 PTPN23Q9H3S7 1636 aa15.18■□□□□ 0.02
RPE-202ENST00000359429 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
RPE-202ENST00000359429 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
RPE-202ENST00000359429 WASHC2AQ641Q2 1341 aa15.17■□□□□ 0.02
RPE-202ENST00000359429 FANCD2Q9BXW9 1451 aa15.16■□□□□ 0.02
RPE-202ENST00000359429 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
RPE-202ENST00000359429 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
RPE-202ENST00000359429 FMN1Q68DA7 1419 aa15.15■□□□□ 0.02
RPE-202ENST00000359429 HSPA5P11021 654 aaKnown RBP15.15■□□□□ 0.02
RPE-202ENST00000359429 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
RPE-202ENST00000359429 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
RPE-202ENST00000359429 NCOA2Q15596 1464 aa15.13■□□□□ 0.01
RPE-202ENST00000359429 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
RPE-202ENST00000359429 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
RPE-202ENST00000359429 DENND4BO75064 1496 aaPredicted RBP15.1■□□□□ 0.01
RPE-202ENST00000359429 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
RPE-202ENST00000359429 CHIC2Q9UKJ5 165 aa15.1■□□□□ 0.01
RPE-202ENST00000359429 CDK11AQ9UQ88 783 aaPredicted RBP15.1■□□□□ 0.01
RPE-202ENST00000359429 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
RPE-202ENST00000359429 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
RPE-202ENST00000359429 C11orf95C9JLR9 678 aaPredicted RBP15.09■□□□□ 0.01
RPE-202ENST00000359429 LRRIQ1Q96JM4 1722 aa15.08■□□□□ 0
RPE-202ENST00000359429 CTTNBP2Q8WZ74 1663 aa15.07■□□□□ 0
RPE-202ENST00000359429 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
RPE-202ENST00000359429 GRIN2BQ13224 1484 aa15.06■□□□□ 0
RPE-202ENST00000359429 CUL7Q14999 1698 aa15.05■□□□□ 0
RPE-202ENST00000359429 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ 0
RPE-202ENST00000359429 NESP48681 1621 aa15.05■□□□□ -0
RPE-202ENST00000359429 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
RPE-202ENST00000359429 MAGI3Q5TCQ9 1506 aa15.03■□□□□ -0
RPE-202ENST00000359429 FAM9BQ8IZU0 186 aa15.03■□□□□ -0
RPE-202ENST00000359429 CNTLNQ9NXG0 1405 aa15.03■□□□□ -0
RPE-202ENST00000359429 SAMD9Q5K651 1589 aa15.03■□□□□ -0
RPE-202ENST00000359429 TDRD9Q8NDG6 1382 aaKnown RBP15.02■□□□□ -0
RPE-202ENST00000359429 PRKRIP1Q9H875 184 aaPredicted RBP15.02■□□□□ -0
RPE-202ENST00000359429 PPP4R2Q9NY27 417 aa15.02■□□□□ -0
RPE-202ENST00000359429 KDM6BO15054 1643 aa15.02□□□□□ -0.01
RPE-202ENST00000359429 UGGT2Q9NYU1 1516 aa15.01□□□□□ -0.01
RPE-202ENST00000359429 B4GALNT3Q6L9W6 998 aa15.01□□□□□ -0.01
RPE-202ENST00000359429 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
RPE-202ENST00000359429 ARHGEF11O15085 1522 aa15□□□□□ -0.01
RPE-202ENST00000359429 ERICH6BQ5W0A0 696 aa15□□□□□ -0.01
RPE-202ENST00000359429 SUPT6HQ7KZ85 1726 aaKnown RBP15□□□□□ -0.01
RPE-202ENST00000359429 EHBP1L1Q8N3D4 1523 aa14.99□□□□□ -0.01
RPE-202ENST00000359429 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
RPE-202ENST00000359429 MRS2Q9HD23 443 aa14.98□□□□□ -0.01
RPE-202ENST00000359429 NCOA1Q15788 1441 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms