RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
SSU72-202ENST00000359060 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
SSU72-202ENST00000359060 ERICH3Q5RHP9 1530 aa15.9■□□□□ 0.14
SSU72-202ENST00000359060 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
SSU72-202ENST00000359060 CNGB1Q14028 1251 aaPredicted RBP15.89■□□□□ 0.13
SSU72-202ENST00000359060 POLR3GLQ9BT43 218 aa15.88■□□□□ 0.13
SSU72-202ENST00000359060 DHX57Q6P158 1386 aaKnown RBP15.88■□□□□ 0.13
SSU72-202ENST00000359060 RAB3GAP2Q9H2M9 1393 aa15.86■□□□□ 0.13
SSU72-202ENST00000359060 ARHGAP35Q9NRY4 1499 aa15.86■□□□□ 0.13
SSU72-202ENST00000359060 NEFLP07196 543 aa15.86■□□□□ 0.13
SSU72-202ENST00000359060 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
SSU72-202ENST00000359060 TONSLQ96HA7 1378 aa15.86■□□□□ 0.13
SSU72-202ENST00000359060 NESP48681 1621 aa15.84■□□□□ 0.13
SSU72-202ENST00000359060 CC2D2AQ9P2K1 1620 aa15.84■□□□□ 0.13
SSU72-202ENST00000359060 ZNF777Q9ULD5 760 aaPredicted RBP15.83■□□□□ 0.13
SSU72-202ENST00000359060 ANP32CO43423 234 aa15.82■□□□□ 0.12
SSU72-202ENST00000359060 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
SSU72-202ENST00000359060 SETD5Q9C0A6 1442 aa15.81■□□□□ 0.12
SSU72-202ENST00000359060 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
SSU72-202ENST00000359060 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
SSU72-202ENST00000359060 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.12
SSU72-202ENST00000359060 BCANQ96GW7 911 aa15.77■□□□□ 0.12
SSU72-202ENST00000359060 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
SSU72-202ENST00000359060 CHMP7Q8WUX9 453 aaPredicted RBP15.76■□□□□ 0.11
SSU72-202ENST00000359060 PHLDB1Q86UU1 1377 aa15.74■□□□□ 0.11
SSU72-202ENST00000359060 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
SSU72-202ENST00000359060 POLA1P09884 1462 aaPredicted RBP15.7■□□□□ 0.1
SSU72-202ENST00000359060 RRBP1Q9P2E9 1410 aaKnown RBP15.7■□□□□ 0.1
SSU72-202ENST00000359060 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
SSU72-202ENST00000359060 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
SSU72-202ENST00000359060 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
SSU72-202ENST00000359060 MYT1LQ9UL68 1186 aa15.62■□□□□ 0.09
SSU72-202ENST00000359060 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
SSU72-202ENST00000359060 SLC4A1APQ9BWU0 796 aaKnown RBP15.61■□□□□ 0.09
SSU72-202ENST00000359060 DNMBPQ6XZF7 1577 aa15.6■□□□□ 0.09
SSU72-202ENST00000359060 TIAM1Q13009 1591 aa15.6■□□□□ 0.09
SSU72-202ENST00000359060 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
SSU72-202ENST00000359060 FOXD1Q16676 465 aa15.58■□□□□ 0.09
SSU72-202ENST00000359060 CFDP1Q9UEE9 299 aaPredicted RBP15.58■□□□□ 0.09
SSU72-202ENST00000359060 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.098e-7■■□□□ 13.1
SSU72-202ENST00000359060 FKBP8Q14318 412 aa15.57■□□□□ 0.08
SSU72-202ENST00000359060 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SSU72-202ENST00000359060 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
SSU72-202ENST00000359060 TIMELESSQ9UNS1 1208 aa15.57■□□□□ 0.08
SSU72-202ENST00000359060 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
SSU72-202ENST00000359060 HNRNPUQ00839 825 aaKnown RBP eCLIP15.55■□□□□ 0.08
SSU72-202ENST00000359060 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.087e-12■□□□□ 9
SSU72-202ENST00000359060 FGD6Q6ZV73 1430 aa15.54■□□□□ 0.08
SSU72-202ENST00000359060 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
SSU72-202ENST00000359060 FYCO1Q9BQS8 1478 aa15.52■□□□□ 0.07
SSU72-202ENST00000359060 PCF11O94913 1555 aaKnown RBP15.51■□□□□ 0.07
SSU72-202ENST00000359060 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
SSU72-202ENST00000359060 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
SSU72-202ENST00000359060 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
SSU72-202ENST00000359060 FAM9BQ8IZU0 186 aa15.49■□□□□ 0.07
SSU72-202ENST00000359060 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
SSU72-202ENST00000359060 KDM2AQ9Y2K7 1162 aa15.48■□□□□ 0.07
SSU72-202ENST00000359060 MPHOSPH9Q99550 1183 aa15.48■□□□□ 0.07
SSU72-202ENST00000359060 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
SSU72-202ENST00000359060 NCOA2Q15596 1464 aa15.46■□□□□ 0.07
SSU72-202ENST00000359060 MYOM3Q5VTT5 1437 aa15.46■□□□□ 0.07
SSU72-202ENST00000359060 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.079e-9■■■□□ 17.8
SSU72-202ENST00000359060 SUPT16HQ9Y5B9 1047 aaKnown RBP15.45■□□□□ 0.06
SSU72-202ENST00000359060 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
SSU72-202ENST00000359060 HSPA5P11021 654 aaKnown RBP15.44■□□□□ 0.06
SSU72-202ENST00000359060 ZNF644Q9H582 1327 aaPredicted RBP15.42■□□□□ 0.06
SSU72-202ENST00000359060 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
SSU72-202ENST00000359060 MRS2Q9HD23 443 aa15.42■□□□□ 0.06
SSU72-202ENST00000359060 L3MBTL2Q969R5 705 aa15.42■□□□□ 0.06
SSU72-202ENST00000359060 JPH4Q96JJ6 628 aa15.41■□□□□ 0.06
SSU72-202ENST00000359060 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
SSU72-202ENST00000359060 CUL7Q14999 1698 aa15.39■□□□□ 0.05
SSU72-202ENST00000359060 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
SSU72-202ENST00000359060 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
SSU72-202ENST00000359060 UACAQ9BZF9 1416 aa15.38■□□□□ 0.05
SSU72-202ENST00000359060 SENP3-EIF4A1A0A087X0R7 540 aa15.36■□□□□ 0.05
SSU72-202ENST00000359060 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
SSU72-202ENST00000359060 CARMIL2Q6F5E8 1435 aa15.36■□□□□ 0.05
SSU72-202ENST00000359060 PKD2Q13563 968 aa15.35■□□□□ 0.05
SSU72-202ENST00000359060 RGL3Q3MIN7 710 aa15.35■□□□□ 0.05
SSU72-202ENST00000359060 MRC2Q9UBG0 1479 aa15.35■□□□□ 0.05
SSU72-202ENST00000359060 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
SSU72-202ENST00000359060 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
SSU72-202ENST00000359060 HFM1A2PYH4 1435 aa15.32■□□□□ 0.04
SSU72-202ENST00000359060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.31■□□□□ 0.041e-6■■□□□ 14.3
SSU72-202ENST00000359060 CDK13Q14004 1512 aaKnown RBP15.31■□□□□ 0.04
SSU72-202ENST00000359060 NAIPQ13075 1403 aa15.3■□□□□ 0.04
SSU72-202ENST00000359060 MAPKBP1O60336 1514 aa15.3■□□□□ 0.04
SSU72-202ENST00000359060 EHBP1L1Q8N3D4 1523 aa15.29■□□□□ 0.04
SSU72-202ENST00000359060 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.041e-8■■■■□ 25.5
SSU72-202ENST00000359060 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
SSU72-202ENST00000359060 ZNF608Q9ULD9 1512 aaPredicted RBP15.28■□□□□ 0.04
SSU72-202ENST00000359060 SALL2Q9Y467 1007 aaPredicted RBP15.28■□□□□ 0.04
SSU72-202ENST00000359060 PTPRKQ15262 1439 aa15.27■□□□□ 0.04
SSU72-202ENST00000359060 TMC1Q8TDI8 760 aa15.27■□□□□ 0.03
SSU72-202ENST00000359060 EPRSP07814 1512 aaKnown RBP15.27■□□□□ 0.03
SSU72-202ENST00000359060 SNAPC4Q5SXM2 1469 aa15.26■□□□□ 0.03
SSU72-202ENST00000359060 NUP155O75694 1391 aa15.26■□□□□ 0.03
SSU72-202ENST00000359060 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
SSU72-202ENST00000359060 IQGAP2Q13576 1575 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms